Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:52 (14272): wrapper (7.7.26015): starting
15:40:52 (14272): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:40:52] Arguments: --nthreads 8
[2025-11-25 15:40:52] Threads: 8
[2025-11-25 15:40:52] Checking for CVMFS
[2025-11-25 15:40:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:40:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:40:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:40:55] 2.11.2.0 13500 284013 143116 153285 0 85 17066545 25165825 4264 130560 14 131348132 99.866 83762842 2908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 15:40:55] CVMFS is ok
[2025-11-25 15:40:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:40:55] Checking for apptainer binary...
[2025-11-25 15:40:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:40:55] Running /usr/bin/apptainer --version
[2025-11-25 15:40:55] apptainer version 1.3.2-1.el7
[2025-11-25 15:40:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:41:07] cg-vwn363.simple-grid.lan
[2025-11-25 15:41:07] apptainer works
[2025-11-25 15:41:07] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:41:07] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:41:08] Starting ATLAS job with PandaID=6895328352
[2025-11-25 15:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:43:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:43:07] 2025-11-26 15:42:20,145 | INFO     | time since job start (89838s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:22,152 | INFO     | time since job start (89840s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:22,504 | INFO     | monitor loop #6032: job 0:6895328352 is in state 'finished'
[2025-11-26 16:43:07] 2025-11-26 15:42:22,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:43:07] 2025-11-26 15:42:24,167 | INFO     | time since job start (89842s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:25,011 | INFO     | monitor loop #6033: job 0:6895328352 is in state 'finished'
[2025-11-26 16:43:07] 2025-11-26 15:42:25,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:43:07] 2025-11-26 15:42:26,174 | INFO     | time since job start (89844s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:27,448 | INFO     | PID=18017 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:43:07] 2025-11-26 15:42:27,448 | INFO     | .. there are 9 such processes running
[2025-11-26 16:43:07] 2025-11-26 15:42:27,531 | INFO     | monitor loop #6034: job 0:6895328352 is in state 'finished'
[2025-11-26 16:43:07] 2025-11-26 15:42:27,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:43:07] 2025-11-26 15:42:28,449 | INFO     | time since job start (89846s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,037 | INFO     | monitor loop #6035: job 0:6895328352 is in state 'finished'
[2025-11-26 16:43:07] 2025-11-26 15:42:30,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,280 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:43:07] 2025-11-26 15:42:30,281 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 16:43:07] 2025-11-26 15:42:30,283 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895328352/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,283 | INFO     | extracted standard info from prmon json
[2025-11-26 16:43:07] 2025-11-26 15:42:30,283 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:43:07] 2025-11-26 15:42:30,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:43:07] 2025-11-26 15:42:30,310 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:43:07] 2025-11-26 15:42:30,312 | INFO     | sum of square deviations: 970976960997.7933
[2025-11-26 16:43:07] 2025-11-26 15:42:30,370 | INFO     | sum of deviations: 3906366448574.824
[2025-11-26 16:43:07] 2025-11-26 15:42:30,370 | INFO     | mean x: 1764127004.190704
[2025-11-26 16:43:07] 2025-11-26 15:42:30,371 | INFO     | mean y: 2827686.971975393
[2025-11-26 16:43:07] 2025-11-26 15:42:30,371 | INFO     | intersect: -7094484419.294413
[2025-11-26 16:43:07] 2025-11-26 15:42:30,373 | INFO     | chi2: 26.35171448701633
[2025-11-26 16:43:07] 2025-11-26 15:42:30,375 | INFO     | sum of square deviations: 961056087673.1799
[2025-11-26 16:43:07] 2025-11-26 15:42:30,432 | INFO     | sum of deviations: 4388747999037.0127
[2025-11-26 16:43:07] 2025-11-26 15:42:30,433 | INFO     | mean x: 1764126851.6947873
[2025-11-26 16:43:07] 2025-11-26 15:42:30,433 | INFO     | mean y: 2835100.9101508916
[2025-11-26 16:43:07] 2025-11-26 15:42:30,433 | INFO     | intersect: -8053206882.204407
[2025-11-26 16:43:07] 2025-11-26 15:42:30,435 | INFO     | chi2: 23.115720911284388
[2025-11-26 16:43:07] 2025-11-26 15:42:30,435 | INFO     | current chi2=23.115720911284388 (change=12.280011523828321 %)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,435 | INFO     | right removable region: 1457
[2025-11-26 16:43:07] 2025-11-26 15:42:30,437 | INFO     | sum of square deviations: 961055025053.1794
[2025-11-26 16:43:07] 2025-11-26 15:42:30,464 | INFO     | time since job start (89848s) is within the limit (172800.0s)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,494 | INFO     | sum of deviations: 3292363890259.7485
[2025-11-26 16:43:07] 2025-11-26 15:42:30,494 | INFO     | mean x: 1764127156.6947873
[2025-11-26 16:43:07] 2025-11-26 15:42:30,494 | INFO     | mean y: 2837123.941015089
[2025-11-26 16:43:07] 2025-11-26 15:42:30,495 | INFO     | intersect: -6040675887.405165
[2025-11-26 16:43:07] 2025-11-26 15:42:30,496 | INFO     | chi2: 21.55907771542882
[2025-11-26 16:43:07] 2025-11-26 15:42:30,496 | INFO     | current chi2=21.55907771542882 (change=18.187191478371833 %)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,497 | INFO     | left removable region: 10
[2025-11-26 16:43:07] 2025-11-26 15:42:30,499 | INFO     | sum of square deviations: 939466423262.858
[2025-11-26 16:43:07] 2025-11-26 15:42:30,554 | INFO     | sum of deviations: 3336746227170.404
[2025-11-26 16:43:07] 2025-11-26 15:42:30,554 | INFO     | mean x: 1764127126.20387
[2025-11-26 16:43:07] 2025-11-26 15:42:30,555 | INFO     | mean y: 2854748.8223911542
[2025-11-26 16:43:07] 2025-11-26 15:42:30,555 | INFO     | intersect: -6262876933.386683
[2025-11-26 16:43:07] 2025-11-26 15:42:30,556 | INFO     | chi2: 13.83903293714074
[2025-11-26 16:43:07] 2025-11-26 15:42:30,557 | INFO     | current memory leak: 3.55 B/s (using 1447 data points, chi2=13.84)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | ..............................
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . Timing measurements:
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . get job = 0 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . initial setup = 6 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . payload setup = 151 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . stage-in = 0 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . payload execution = 89395 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . stage-out = 5 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,558 | INFO     | . log creation = 1 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,559 | INFO     | ..............................
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | 
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | job summary report
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | --------------------------------------------------
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | PanDA job id: 6895328352
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | task id: 47556137
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | errors: (none)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | pilot state: finished 
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | transexitcode: 0
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | exeerrorcode: 0
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | exeerrordiag: 
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | exitcode: 0
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | exitmsg: OK
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | cpuconsumptiontime: 334484 s
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | nevents: 1000
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | neventsw: 0
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | pid: 24574
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | pgrp: 24574
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | corecount: 8
[2025-11-26 16:43:07] 2025-11-26 15:42:30,666 | INFO     | event service: False
[2025-11-26 16:43:07] 2025-11-26 15:42:30,667 | INFO     | sizes: {0: 2283482, 1: 2284195, 2: 2284366, 13: 2284366, 23: 2284422, 34: 2284450, 45: 2284606, 56: 2284634, 67: 2284662, 77: 2284690, 88: 2284746, 99: 2285054, 10
[2025-11-26 16:43:07] 2025-11-26 15:42:30,667 | INFO     | --------------------------------------------------
[2025-11-26 16:43:07] 2025-11-26 15:42:30,667 | INFO     | 
[2025-11-26 16:43:07] 2025-11-26 15:42:30,667 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-26 16:43:07] 2025-11-26 15:42:30,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | job 6895328352 has completed (purged errors)
[2025-11-26 16:43:07] 2025-11-26 15:42:30,701 | INFO     | overall cleanup function is called
[2025-11-26 16:43:07] 2025-11-26 15:42:31,718 | INFO     | --- collectZombieJob: --- 10, [24574]
[2025-11-26 16:43:07] 2025-11-26 15:42:31,718 | INFO     | zombie collector waiting for pid 24574
[2025-11-26 16:43:07] 2025-11-26 15:42:31,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:43:07] 2025-11-26 15:42:31,718 | INFO     | collected zombie processes
[2025-11-26 16:43:07] 2025-11-26 15:42:31,718 | INFO     | will attempt to kill all subprocesses of pid=24574
[2025-11-26 16:43:07] 2025-11-26 15:42:31,812 | INFO     | process IDs to be killed: [24574] (in reverse order)
[2025-11-26 16:43:07] 2025-11-26 15:42:32,503 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:43:07] 2025-11-26 15:42:32,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:43:07] 2025-11-26 15:42:32,506 | INFO     | did not find any defunct processes belonging to 24574
[2025-11-26 16:43:07] 2025-11-26 15:42:32,509 | INFO     | did not find any defunct processes belonging to 24574
[2025-11-26 16:43:07] 2025-11-26 15:42:32,553 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:43:07] 2025-11-26 15:42:32,553 | INFO     | ready for new job
[2025-11-26 16:43:07] 2025-11-26 15:42:32,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:43:07] 2025-11-26 15:42:32,559 | INFO     | ***************************************
[2025-11-26 16:43:07] 2025-11-26 15:42:32,559 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:43:07] 2025-11-26 15:42:32,559 | INFO     | ***************************************
[2025-11-26 16:43:07] 2025-11-26 15:42:32,559 | INFO     | 
[2025-11-26 16:43:07] 2025-11-26 15:42:32,560 | INFO     | pilot is running in a VM
[2025-11-26 16:43:07] 2025-11-26 15:42:32,560 | INFO     | architecture information:
[2025-11-26 16:43:07] 2025-11-26 15:42:32,571 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:43:07] 2025-11-26 15:42:32,889 | INFO     | cat /etc/os-release:
[2025-11-26 16:43:07] NAME="CentOS Linux"
[2025-11-26 16:43:07] VERSION="7 (Core)"
[2025-11-26 16:43:07] ID="centos"
[2025-11-26 16:43:07] ID_LIKE="rhel fedora"
[2025-11-26 16:43:07] VERSION_ID="7"
[2025-11-26 16:43:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:43:07] ANSI_COLOR="0;31"
[2025-11-26 16:43:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:43:07] HOME_URL="https://www.centos.org/"
[2025-11-26 16:43:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:43:07] 
[2025-11-26 16:43:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:43:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:43:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:43:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:43:07] 
[2025-11-26 16:43:07] 2025-11-26 15:42:32,889 | INFO     | ***************************************
[2025-11-26 16:43:07] 2025-11-26 15:42:33,391 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-26 16:43:07] 2025-11-26 15:42:33,595 | INFO     | sufficient remaining disk space (495825453056 B)
[2025-11-26 16:43:07] 2025-11-26 15:42:33,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:43:07] 2025-11-26 15:42:33,595 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:43:07] 2025-11-26 15:42:33,595 | INFO     | update_server=False
[2025-11-26 16:43:07] 2025-11-26 15:42:33,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:43:07] 2025-11-26 15:42:33,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:43:07] 2025-11-26 15:42:33,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:43:07] 2025-11-26 15:42:33,599 | INFO     | aborting loop
[2025-11-26 16:43:07] 2025-11-26 15:42:33,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:43:07] 2025-11-26 15:42:33,711 | INFO     | all payload control threads have been joined
[2025-11-26 16:43:07] 2025-11-26 15:42:34,338 | INFO     | all data control threads have been joined
[2025-11-26 16:43:07] 2025-11-26 15:42:34,601 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:34,604 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:34,717 | INFO     | [payload] control thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:34,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:34,761 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:34,823 | INFO     | all job control threads have been joined
[2025-11-26 16:43:07] 2025-11-26 15:42:34,914 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,344 | INFO     | [data] control thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,388 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,529 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,602 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:43:07] 2025-11-26 15:42:35,752 | INFO     | [job] validate thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,799 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:35,829 | INFO     | [job] control thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:36,075 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:36,687 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:37,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:43:07] 2025-11-26 15:42:38,369 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:43:07] 2025-11-26 15:42:38,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721073567552)>', '<ExcThread(monitor, started 139720612882176)>']
[2025-11-26 16:43:07] 2025-11-26 15:42:43,767 | INFO     | all workflow threads have been joined
[2025-11-26 16:43:07] 2025-11-26 15:42:43,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:43:07] 2025-11-26 15:42:43,767 | INFO     | traces error code: 0
[2025-11-26 16:43:07] 2025-11-26 15:42:43,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:43:07] 2025-11-26 15:43:03,657 | INFO     | PID=18017 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:43:07] 2025-11-26 15:43:03,657 | INFO     | .. there are 9 such processes running
[2025-11-26 16:43:07] 2025-11-26 15:43:03,658 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:43:07] 2025-11-26 15:43:03,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:43:07] 2025-11-26 15:43:03,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:43:07] 2025-11-26 15:43:03,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:43:07] 2025-11-26 15:43:03,659 | INFO     | [monitor] control thread has ended
[2025-11-26 16:43:07] 2025-11-26 15:43:03,978 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:43:07] 2025-11-26 15:43:04,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:43:07] 2025-11-26 15:43:04,081 [wrapper] pilotpid: 18017
[2025-11-26 16:43:07] 2025-11-26 15:43:04,173 [wrapper] Pilot exit status: 0
[2025-11-26 16:43:07] 2025-11-26 15:43:04,432 [wrapper] pandaids: 6895328352
[2025-11-26 16:43:07] 2025-11-26 15:43:05,276 [wrapper] cleanup supervisor_pilot 21630 18018
[2025-11-26 16:43:07] 2025-11-26 15:43:05,378 [wrapper] Test setup, not cleaning
[2025-11-26 16:43:07] 2025-11-26 15:43:05,446 [wrapper] apfmon messages muted
[2025-11-26 16:43:07] 2025-11-26 15:43:05,560 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:43:07] 2025-11-26 15:43:05,652 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:43:07]  *** Error codes and diagnostics ***
[2025-11-26 16:43:07]     "exeErrorCode": 0,
[2025-11-26 16:43:07]     "exeErrorDiag": "",
[2025-11-26 16:43:07]     "pilotErrorCode": 0,
[2025-11-26 16:43:07]     "pilotErrorDiag": "",
[2025-11-26 16:43:07]  *** Listing of results directory ***
[2025-11-26 16:43:07] total 1322948
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc    576529 Nov 21 17:59 pilot3.tar.gz
[2025-11-26 16:43:07] -rwx------. 1 boinc boinc     36292 Nov 21 18:01 runpilot2-wrapper.sh
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc      5112 Nov 21 18:01 queuedata.json
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc       100 Nov 25 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:43:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 15:40 run_atlas
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc       105 Nov 25 15:40 job.xml
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc      6392 Nov 25 15:40 init_data.xml
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc 409288411 Nov 25 15:40 EVNT.47483658._000074.pool.root.1
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc     15847 Nov 25 15:40 start_atlas.sh
[2025-11-26 16:43:07] drwxrwx--x. 2 boinc boinc        68 Nov 25 15:40 shared
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc    590097 Nov 25 15:40 input.tar.gz
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc         0 Nov 25 15:40 boinc_lockfile
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc      2783 Nov 25 15:41 pandaJob.out
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc    991909 Nov 25 15:44 agis_schedconf.cvmfs.json
[2025-11-26 16:43:07] drwx------. 5 boinc boinc      4096 Nov 25 15:45 pilot3
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc       533 Nov 26 16:16 boinc_task_state.xml
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc 912391896 Nov 26 16:39 HITS.47556137._000734.pool.root.1
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc      1030 Nov 26 16:40 memory_monitor_summary.json
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc   1516240 Nov 26 16:40 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc   2544652 Nov 26 16:40 log.47556137._000734.job.log.tgz.1
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc      8635 Nov 26 16:42 heartbeat.json
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc      8192 Nov 26 16:42 boinc_mmap_file
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc        29 Nov 26 16:42 wrapper_checkpoint.txt
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc        95 Nov 26 16:43 pilot_heartbeat.json
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc       820 Nov 26 16:43 pilotlog.txt
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc  12012659 Nov 26 16:43 log.47556137._000734.job.log.1
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc       353 Nov 26 16:43 output.list
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc       620 Nov 26 16:43 runtime_log
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc  14581760 Nov 26 16:43 result.tar.gz
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc      8817 Nov 26 16:43 runtime_log.err
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc       662 Nov 26 16:43 KtLLDmDhjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmZJKDmJxZLYo.diag
[2025-11-26 16:43:07] -rw-r--r--. 1 boinc boinc     21500 Nov 26 16:43 stderr.txt
[2025-11-26 16:43:07] HITS file was successfully produced:
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc 912391896 Nov 26 16:39 shared/HITS.pool.root.1
[2025-11-26 16:43:07]  *** Contents of shared directory: ***
[2025-11-26 16:43:07] total 1305540
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc 409288411 Nov 25 15:40 ATLAS.root_0
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc     15847 Nov 25 15:40 start_atlas.sh
[2025-11-26 16:43:07] -rw-r--r--. 2 boinc boinc    590097 Nov 25 15:40 input.tar.gz
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc 912391896 Nov 26 16:39 HITS.pool.root.1
[2025-11-26 16:43:07] -rw-------. 1 boinc boinc  14581760 Nov 26 16:43 result.tar.gz
16:43:08 (14272): run_atlas exited; CPU time 335107.391222
16:43:08 (14272): called boinc_finish(0)

</stderr_txt>
]]>

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