Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:43 (12701): wrapper (7.7.26015): starting
00:14:43 (12701): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:14:43] Arguments: --nthreads 8
[2025-11-26 00:14:43] Threads: 8
[2025-11-26 00:14:43] Checking for CVMFS
[2025-11-26 00:14:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:14:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:14:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:14:46] 2.11.2.0 570 284415 135420 153301 0 84 23581672 25165824 1706 130560 9 124090273 99.876 80719113 2952 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 00:14:46] CVMFS is ok
[2025-11-26 00:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:14:46] Checking for apptainer binary...
[2025-11-26 00:14:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:14:46] Running /usr/bin/apptainer --version
[2025-11-26 00:14:46] apptainer version 1.3.2-1.el7
[2025-11-26 00:14:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:14:58] cg-vwn366.simple-grid.lan
[2025-11-26 00:14:58] apptainer works
[2025-11-26 00:14:58] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:14:58] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:14:58] Starting ATLAS job with PandaID=6895336057
[2025-11-26 00:14:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:43:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:43:04] 2025-11-26 23:41:55,104 | INFO     | monitor loop #5889: job 0:6895336057 is in state 'finished'
[2025-11-27 00:43:04] 2025-11-26 23:41:55,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:43:04] 2025-11-26 23:41:56,164 | INFO     | time since job start (87755s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:41:57,611 | INFO     | monitor loop #5890: job 0:6895336057 is in state 'finished'
[2025-11-27 00:43:04] 2025-11-26 23:41:57,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:43:04] 2025-11-26 23:41:58,179 | INFO     | time since job start (87757s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:42:00,115 | INFO     | monitor loop #5891: job 0:6895336057 is in state 'finished'
[2025-11-27 00:43:04] 2025-11-26 23:42:00,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:43:04] 2025-11-26 23:42:00,186 | INFO     | time since job start (87759s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:42:02,193 | INFO     | time since job start (87761s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:42:02,627 | INFO     | monitor loop #5892: job 0:6895336057 is in state 'finished'
[2025-11-27 00:43:04] 2025-11-26 23:42:02,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:43:04] 2025-11-26 23:42:04,200 | INFO     | time since job start (87763s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:42:05,132 | INFO     | monitor loop #5893: job 0:6895336057 is in state 'finished'
[2025-11-27 00:43:04] 2025-11-26 23:42:05,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,041 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:43:04] 2025-11-26 23:42:06,042 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:43:04] 2025-11-26 23:42:06,043 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6895336057/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,044 | INFO     | extracted standard info from prmon json
[2025-11-27 00:43:04] 2025-11-26 23:42:06,044 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:43:04] 2025-11-26 23:42:06,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:43:04] 2025-11-26 23:42:06,089 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:43:04] 2025-11-26 23:42:06,091 | INFO     | sum of square deviations: 904843849812.6187
[2025-11-27 00:43:04] 2025-11-26 23:42:06,197 | INFO     | sum of deviations: 2885101371450.5537
[2025-11-27 00:43:04] 2025-11-26 23:42:06,197 | INFO     | mean x: 1764156808.1070678
[2025-11-27 00:43:04] 2025-11-26 23:42:06,197 | INFO     | mean y: 2836153.133659902
[2025-11-27 00:43:04] 2025-11-26 23:42:06,197 | INFO     | intersect: -5622191002.189943
[2025-11-27 00:43:04] 2025-11-26 23:42:06,199 | INFO     | chi2: 20.865992013933745
[2025-11-27 00:43:04] 2025-11-26 23:42:06,201 | INFO     | sum of square deviations: 895379485086.4694
[2025-11-27 00:43:04] 2025-11-26 23:42:06,217 | INFO     | time since job start (87765s) is within the limit (172800.0s)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,282 | INFO     | sum of deviations: 3346094973845.8906
[2025-11-27 00:43:04] 2025-11-26 23:42:06,282 | INFO     | mean x: 1764156655.610955
[2025-11-27 00:43:04] 2025-11-26 23:42:06,282 | INFO     | mean y: 2843581.54494382
[2025-11-27 00:43:04] 2025-11-26 23:42:06,282 | INFO     | intersect: -6589931679.378662
[2025-11-27 00:43:04] 2025-11-26 23:42:06,284 | INFO     | chi2: 17.82626264362642
[2025-11-27 00:43:04] 2025-11-26 23:42:06,284 | INFO     | current chi2=17.82626264362642 (change=14.567864150803253 %)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,284 | INFO     | right removable region: 1423
[2025-11-27 00:43:04] 2025-11-26 23:42:06,286 | INFO     | sum of square deviations: 895378520066.4695
[2025-11-27 00:43:04] 2025-11-26 23:42:06,356 | INFO     | sum of deviations: 2287974351230.0513
[2025-11-27 00:43:04] 2025-11-26 23:42:06,356 | INFO     | mean x: 1764156960.610955
[2025-11-27 00:43:04] 2025-11-26 23:42:06,356 | INFO     | mean y: 2845773.2654494382
[2025-11-27 00:43:04] 2025-11-26 23:42:06,357 | INFO     | intersect: -4505131341.399068
[2025-11-27 00:43:04] 2025-11-26 23:42:06,358 | INFO     | chi2: 16.198383143007234
[2025-11-27 00:43:04] 2025-11-26 23:42:06,359 | INFO     | current chi2=16.198383143007234 (change=22.36945584858658 %)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,359 | INFO     | left removable region: 10
[2025-11-27 00:43:04] 2025-11-26 23:42:06,361 | INFO     | sum of square deviations: 874788768176.7861
[2025-11-27 00:43:04] 2025-11-26 23:42:06,421 | INFO     | sum of deviations: 2356437940732.8145
[2025-11-27 00:43:04] 2025-11-26 23:42:06,421 | INFO     | mean x: 1764156930.1196036
[2025-11-27 00:43:04] 2025-11-26 23:42:06,422 | INFO     | mean y: 2862989.5987261147
[2025-11-27 00:43:04] 2025-11-26 23:42:06,422 | INFO     | intersect: -4749285728.776734
[2025-11-27 00:43:04] 2025-11-26 23:42:06,423 | INFO     | chi2: 9.301233028856602
[2025-11-27 00:43:04] 2025-11-26 23:42:06,424 | INFO     | current memory leak: 2.69 B/s (using 1413 data points, chi2=9.30)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,425 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,425 | INFO     | ..............................
[2025-11-27 00:43:04] 2025-11-26 23:42:06,425 | INFO     | . Timing measurements:
[2025-11-27 00:43:04] 2025-11-26 23:42:06,425 | INFO     | . get job = 0 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,425 | INFO     | . initial setup = 3 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | . payload setup = 148 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | . stage-in = 0 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | . payload execution = 87335 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | . stage-out = 5 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | . log creation = 2 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,426 | INFO     | ..............................
[2025-11-27 00:43:04] 2025-11-26 23:42:06,739 | INFO     | 
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | job summary report
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | --------------------------------------------------
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | PanDA job id: 6895336057
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | task id: 47556137
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | errors: (none)
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | pilot state: finished 
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | transexitcode: 0
[2025-11-27 00:43:04] 2025-11-26 23:42:06,740 | INFO     | exeerrorcode: 0
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | exeerrordiag: 
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | exitcode: 0
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | exitmsg: OK
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | cpuconsumptiontime: 328720 s
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | nevents: 1000
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | neventsw: 0
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | pid: 23070
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | pgrp: 23070
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | corecount: 8
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | event service: False
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | sizes: {0: 2284088, 1: 2284343, 12: 2284343, 23: 2284371, 33: 2284399, 44: 2284455, 55: 2284611, 66: 2284639, 76: 2284667, 81: 2284985, 87: 2285013, 87488: 2346585
[2025-11-27 00:43:04] 2025-11-26 23:42:06,741 | INFO     | --------------------------------------------------
[2025-11-27 00:43:04] 2025-11-26 23:42:06,742 | INFO     | 
[2025-11-27 00:43:04] 2025-11-26 23:42:06,742 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-27 00:43:04] 2025-11-26 23:42:07,224 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | job 6895336057 has completed (purged errors)
[2025-11-27 00:43:04] 2025-11-26 23:42:07,226 | INFO     | overall cleanup function is called
[2025-11-27 00:43:04] 2025-11-26 23:42:08,248 | INFO     | --- collectZombieJob: --- 10, [23070]
[2025-11-27 00:43:04] 2025-11-26 23:42:08,249 | INFO     | zombie collector waiting for pid 23070
[2025-11-27 00:43:04] 2025-11-26 23:42:08,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:43:04] 2025-11-26 23:42:08,249 | INFO     | collected zombie processes
[2025-11-27 00:43:04] 2025-11-26 23:42:08,249 | INFO     | will attempt to kill all subprocesses of pid=23070
[2025-11-27 00:43:04] 2025-11-26 23:42:08,374 | INFO     | process IDs to be killed: [23070] (in reverse order)
[2025-11-27 00:43:04] 2025-11-26 23:42:09,215 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:43:04] 2025-11-26 23:42:09,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:43:04] 2025-11-26 23:42:09,219 | INFO     | did not find any defunct processes belonging to 23070
[2025-11-27 00:43:04] 2025-11-26 23:42:09,221 | INFO     | did not find any defunct processes belonging to 23070
[2025-11-27 00:43:04] 2025-11-26 23:42:09,283 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:43:04] 2025-11-26 23:42:09,283 | INFO     | ready for new job
[2025-11-27 00:43:04] 2025-11-26 23:42:09,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:43:04] 2025-11-26 23:42:09,289 | INFO     | ***************************************
[2025-11-27 00:43:04] 2025-11-26 23:42:09,289 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:43:04] 2025-11-26 23:42:09,289 | INFO     | ***************************************
[2025-11-27 00:43:04] 2025-11-26 23:42:09,289 | INFO     | 
[2025-11-27 00:43:04] 2025-11-26 23:42:09,290 | INFO     | pilot is running in a VM
[2025-11-27 00:43:04] 2025-11-26 23:42:09,290 | INFO     | architecture information:
[2025-11-27 00:43:04] 2025-11-26 23:42:09,295 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:43:04] 2025-11-26 23:42:09,518 | INFO     | cat /etc/os-release:
[2025-11-27 00:43:04] NAME="CentOS Linux"
[2025-11-27 00:43:04] VERSION="7 (Core)"
[2025-11-27 00:43:04] ID="centos"
[2025-11-27 00:43:04] ID_LIKE="rhel fedora"
[2025-11-27 00:43:04] VERSION_ID="7"
[2025-11-27 00:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:43:04] ANSI_COLOR="0;31"
[2025-11-27 00:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:43:04] HOME_URL="https://www.centos.org/"
[2025-11-27 00:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:43:04] 
[2025-11-27 00:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:43:04] 
[2025-11-27 00:43:04] 2025-11-26 23:42:09,518 | INFO     | ***************************************
[2025-11-27 00:43:04] 2025-11-26 23:42:10,022 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-27 00:43:04] 2025-11-26 23:42:10,294 | INFO     | sufficient remaining disk space (495227764736 B)
[2025-11-27 00:43:04] 2025-11-26 23:42:10,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:43:04] 2025-11-26 23:42:10,295 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:43:04] 2025-11-26 23:42:10,295 | INFO     | update_server=False
[2025-11-27 00:43:04] 2025-11-26 23:42:10,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:43:04] 2025-11-26 23:42:10,896 | INFO     | all data control threads have been joined
[2025-11-27 00:43:04] 2025-11-26 23:42:11,034 | INFO     | all payload control threads have been joined
[2025-11-27 00:43:04] 2025-11-26 23:42:11,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:43:04] 2025-11-26 23:42:11,183 | INFO     | aborting loop
[2025-11-27 00:43:04] 2025-11-26 23:42:11,302 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:11,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:43:04] 2025-11-26 23:42:11,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:43:04] 2025-11-26 23:42:11,654 | INFO     | all job control threads have been joined
[2025-11-27 00:43:04] 2025-11-26 23:42:11,678 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:11,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:11,903 | INFO     | [data] control thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,041 | INFO     | [payload] control thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,141 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,189 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,344 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,561 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,603 | INFO     | [job] validate thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,661 | INFO     | [job] control thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,711 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,712 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:12,774 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:13,403 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:13,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:43:04] 2025-11-26 23:42:17,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:43:04] 2025-11-26 23:42:39,387 | INFO     | PID=16519 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:43:04] 2025-11-26 23:42:39,387 | INFO     | .. there are 9 such processes running
[2025-11-27 00:43:04] 2025-11-26 23:42:39,388 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:43:04] 2025-11-26 23:42:39,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:43:04] 2025-11-26 23:42:39,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:43:04] 2025-11-26 23:42:54,701 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:43:04] 2025-11-26 23:42:55,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642474796864)>', '<ExcThread(monitor, started 140641891759872)>']
[2025-11-27 00:43:04] 2025-11-26 23:42:55,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:43:04] 2025-11-26 23:42:55,482 | INFO     | [monitor] control thread has ended
[2025-11-27 00:43:04] 2025-11-26 23:43:00,340 | INFO     | all workflow threads have been joined
[2025-11-27 00:43:04] 2025-11-26 23:43:00,341 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:43:04] 2025-11-26 23:43:00,341 | INFO     | traces error code: 0
[2025-11-27 00:43:04] 2025-11-26 23:43:00,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:43:04] 2025-11-26 23:43:00,662 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:43:04] 2025-11-26 23:43:00,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:43:04] 2025-11-26 23:43:00,864 [wrapper] pilotpid: 16519
[2025-11-27 00:43:04] 2025-11-26 23:43:00,979 [wrapper] Pilot exit status: 0
[2025-11-27 00:43:04] 2025-11-26 23:43:01,365 [wrapper] pandaids: 6895336057
[2025-11-27 00:43:04] 2025-11-26 23:43:02,188 [wrapper] cleanup supervisor_pilot 22222 16520
[2025-11-27 00:43:04] 2025-11-26 23:43:02,191 [wrapper] Test setup, not cleaning
[2025-11-27 00:43:04] 2025-11-26 23:43:02,200 [wrapper] apfmon messages muted
[2025-11-27 00:43:04] 2025-11-26 23:43:02,203 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:43:04] 2025-11-26 23:43:02,206 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:43:04]  *** Error codes and diagnostics ***
[2025-11-27 00:43:04]     "exeErrorCode": 0,
[2025-11-27 00:43:04]     "exeErrorDiag": "",
[2025-11-27 00:43:04]     "pilotErrorCode": 0,
[2025-11-27 00:43:04]     "pilotErrorDiag": "",
[2025-11-27 00:43:04]  *** Listing of results directory ***
[2025-11-27 00:43:04] total 1317352
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc    576529 Nov 22 06:12 pilot3.tar.gz
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc      5112 Nov 22 06:12 queuedata.json
[2025-11-27 00:43:04] -rwx------. 1 boinc boinc     36292 Nov 22 06:12 runpilot2-wrapper.sh
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc       100 Nov 26 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:43:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 00:14 run_atlas
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc       105 Nov 26 00:14 job.xml
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc      6391 Nov 26 00:14 init_data.xml
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc 410553713 Nov 26 00:14 EVNT.47483658._000266.pool.root.1
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:14 start_atlas.sh
[2025-11-27 00:43:04] drwxrwx--x. 2 boinc boinc        68 Nov 26 00:14 shared
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc    590098 Nov 26 00:14 input.tar.gz
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc         0 Nov 26 00:14 boinc_lockfile
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc      2786 Nov 26 00:14 pandaJob.out
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc    991877 Nov 26 00:19 agis_schedconf.cvmfs.json
[2025-11-27 00:43:04] drwx------. 5 boinc boinc      4096 Nov 26 00:19 pilot3
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc       533 Nov 27 00:13 boinc_task_state.xml
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc 906173357 Nov 27 00:39 HITS.47556137._002623.pool.root.1
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc      1028 Nov 27 00:40 memory_monitor_summary.json
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc   1516240 Nov 27 00:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc   2498401 Nov 27 00:40 log.47556137._002623.job.log.tgz.1
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc        95 Nov 27 00:41 pilot_heartbeat.json
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc      7940 Nov 27 00:42 heartbeat.json
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:42 boinc_mmap_file
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:42 wrapper_checkpoint.txt
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc      4884 Nov 27 00:43 pilotlog.txt
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc  11675077 Nov 27 00:43 log.47556137._002623.job.log.1
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc       353 Nov 27 00:43 output.list
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:43 runtime_log
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc  14192640 Nov 27 00:43 result.tar.gz
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc      8817 Nov 27 00:43 runtime_log.err
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc       662 Nov 27 00:43 PPYLDmi6ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHyJKDmCc1nHo.diag
[2025-11-27 00:43:04] -rw-r--r--. 1 boinc boinc     21437 Nov 27 00:43 stderr.txt
[2025-11-27 00:43:04] HITS file was successfully produced:
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc 906173357 Nov 27 00:39 shared/HITS.pool.root.1
[2025-11-27 00:43:04]  *** Contents of shared directory: ***
[2025-11-27 00:43:04] total 1300324
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc 410553713 Nov 26 00:14 ATLAS.root_0
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:14 start_atlas.sh
[2025-11-27 00:43:04] -rw-r--r--. 2 boinc boinc    590098 Nov 26 00:14 input.tar.gz
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc 906173357 Nov 27 00:39 HITS.pool.root.1
[2025-11-27 00:43:04] -rw-------. 1 boinc boinc  14192640 Nov 27 00:43 result.tar.gz
00:43:06 (12701): run_atlas exited; CPU time 329326.165595
00:43:06 (12701): called boinc_finish(0)

</stderr_txt>
]]>

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