Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:29 (74517): wrapper (7.7.26015): starting
00:11:29 (74517): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:11:29] Arguments: --nthreads 8
[2025-11-23 00:11:29] Threads: 8
[2025-11-23 00:11:29] Checking for CVMFS
[2025-11-23 00:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:11:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:11:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:11:31] 2.13.2.0 6099 29645 294368 153197 0 254 30033517 40960001 10837 16776704 0 30710805 99.749 20785176 36193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:11:31] CVMFS is ok
[2025-11-23 00:11:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:11:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:11:32] Further information can be found at the LHC@home message board.
[2025-11-23 00:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:11:32] Checking for apptainer binary...
[2025-11-23 00:11:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:11:32] Running /usr/bin/apptainer --version
[2025-11-23 00:11:32] apptainer version 1.4.4-1.el9
[2025-11-23 00:11:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:11:32] c-210-31-2.aglt2.org
[2025-11-23 00:11:32] apptainer works
[2025-11-23 00:11:32] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:11:32] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:11:32] Starting ATLAS job with PandaID=6895336179
[2025-11-23 00:11:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:48:14]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:48:15] 2025-11-24 09:46:48,412 | INFO     | monitor loop #6519: job 0:6895336179 is in state 'finished'
[2025-11-24 04:48:15] 2025-11-24 09:46:48,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:48:15] 2025-11-24 09:46:48,827 | INFO     | time since job start (102847s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:50,834 | INFO     | time since job start (102849s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:50,926 | INFO     | monitor loop #6520: job 0:6895336179 is in state 'finished'
[2025-11-24 04:48:15] 2025-11-24 09:46:50,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:48:15] 2025-11-24 09:46:52,843 | INFO     | time since job start (102851s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:53,489 | INFO     | monitor loop #6521: job 0:6895336179 is in state 'finished'
[2025-11-24 04:48:15] 2025-11-24 09:46:53,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:48:15] 2025-11-24 09:46:54,853 | INFO     | time since job start (102853s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:55,622 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 04:48:15] 2025-11-24 09:46:55,658 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2674.7727142857148
[2025-11-24 04:48:15] 2025-11-24 09:46:55,760 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895336179/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:48:15] 2025-11-24 09:46:55,770 | INFO     | extracted standard info from prmon json
[2025-11-24 04:48:15] 2025-11-24 09:46:55,770 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:48:15] 2025-11-24 09:46:55,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:48:15] 2025-11-24 09:46:56,061 | INFO     | monitor loop #6522: job 0:6895336179 is in state 'finished'
[2025-11-24 04:48:15] 2025-11-24 09:46:56,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:48:15] 2025-11-24 09:46:56,220 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:48:15] 2025-11-24 09:46:56,259 | INFO     | sum of square deviations: 1478253866654.5693
[2025-11-24 04:48:15] 2025-11-24 09:46:56,802 | INFO     | sum of deviations: 3510418938718.344
[2025-11-24 04:48:15] 2025-11-24 09:46:56,803 | INFO     | mean x: 1763926208.9251337
[2025-11-24 04:48:15] 2025-11-24 09:46:56,803 | INFO     | mean y: 2858930.859774213
[2025-11-24 04:48:15] 2025-11-24 09:46:56,803 | INFO     | intersect: -4185947951.3612094
[2025-11-24 04:48:15] 2025-11-24 09:46:56,841 | INFO     | chi2: 46.217741818473854
[2025-11-24 04:48:15] 2025-11-24 09:46:56,843 | INFO     | sum of square deviations: 1465120370004.802
[2025-11-24 04:48:15] 2025-11-24 09:46:57,080 | INFO     | time since job start (102856s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:57,357 | INFO     | sum of deviations: 4190733535718.9834
[2025-11-24 04:48:15] 2025-11-24 09:46:57,357 | INFO     | mean x: 1763926056.4368296
[2025-11-24 04:48:15] 2025-11-24 09:46:57,357 | INFO     | mean y: 2866829.7735399283
[2025-11-24 04:48:15] 2025-11-24 09:46:57,357 | INFO     | intersect: -5042550755.413764
[2025-11-24 04:48:15] 2025-11-24 09:46:57,384 | INFO     | chi2: 41.323651092371506
[2025-11-24 04:48:15] 2025-11-24 09:46:57,384 | INFO     | current chi2=41.323651092371506 (change=10.589203482343471 %)
[2025-11-24 04:48:15] 2025-11-24 09:46:57,385 | INFO     | right removable region: 1677
[2025-11-24 04:48:15] 2025-11-24 09:46:57,387 | INFO     | sum of square deviations: 1465116340344.8032
[2025-11-24 04:48:15] 2025-11-24 09:46:57,737 | INFO     | sum of deviations: 2810578045384.3813
[2025-11-24 04:48:15] 2025-11-24 09:46:57,737 | INFO     | mean x: 1763926361.4368296
[2025-11-24 04:48:15] 2025-11-24 09:46:57,737 | INFO     | mean y: 2867054.673420739
[2025-11-24 04:48:15] 2025-11-24 09:46:57,737 | INFO     | intersect: -3380927507.3081656
[2025-11-24 04:48:15] 2025-11-24 09:46:57,739 | INFO     | chi2: 41.80201355963622
[2025-11-24 04:48:15] 2025-11-24 09:46:57,739 | INFO     | current chi2=41.80201355963622 (change=9.554184356693527 %)
[2025-11-24 04:48:15] 2025-11-24 09:46:57,769 | INFO     | left removable region: 10
[2025-11-24 04:48:15] 2025-11-24 09:46:57,771 | INFO     | sum of square deviations: 1436493121720.6206
[2025-11-24 04:48:15] 2025-11-24 09:46:58,255 | INFO     | sum of deviations: 3000187558524.073
[2025-11-24 04:48:15] 2025-11-24 09:46:58,255 | INFO     | mean x: 1763926330.9622076
[2025-11-24 04:48:15] 2025-11-24 09:46:58,255 | INFO     | mean y: 2883235.556688662
[2025-11-24 04:48:15] 2025-11-24 09:46:58,255 | INFO     | intersect: -3681164917.7452793
[2025-11-24 04:48:15] 2025-11-24 09:46:58,257 | INFO     | chi2: 33.133132744055885
[2025-11-24 04:48:15] 2025-11-24 09:46:58,258 | INFO     | current memory leak: 2.09 B/s (using 1667 data points, chi2=33.13)
[2025-11-24 04:48:15] 2025-11-24 09:46:58,284 | INFO     | could have reported an average CPU frequency of 2774 MHz (59 samples)
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | ..............................
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . Timing measurements:
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . get job = 0 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . initial setup = 11 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . payload setup = 50 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . stage-in = 0 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . payload execution = 102651 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . stage-out = 32 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | . log creation = 14 s
[2025-11-24 04:48:15] 2025-11-24 09:46:58,285 | INFO     | ..............................
[2025-11-24 04:48:15] 2025-11-24 09:46:59,179 | INFO     | time since job start (102858s) is within the limit (172800.0s)
[2025-11-24 04:48:15] 2025-11-24 09:46:59,381 | INFO     | 
[2025-11-24 04:48:15] 2025-11-24 09:46:59,381 | INFO     | job summary report
[2025-11-24 04:48:15] 2025-11-24 09:46:59,381 | INFO     | --------------------------------------------------
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | PanDA job id: 6895336179
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | task id: 47556149
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | errors: (none)
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | pilot state: finished 
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | transexitcode: 0
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | exeerrorcode: 0
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | exeerrordiag: 
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | exitcode: 0
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | exitmsg: OK
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | cpuconsumptiontime: 250721 s
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | nevents: 1000
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | neventsw: 0
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | pid: 97663
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | pgrp: 97663
[2025-11-24 04:48:15] 2025-11-24 09:46:59,382 | INFO     | corecount: 8
[2025-11-24 04:48:15] 2025-11-24 09:46:59,383 | INFO     | event service: False
[2025-11-24 04:48:15] 2025-11-24 09:46:59,383 | INFO     | sizes: {0: 2298634, 1: 2298833, 2: 2298861, 13: 2298861, 23: 2298917, 32: 2299207, 34: 2299363, 102708: 2373159, 102742: 2382153, 102744: 2382209, 102794: 2382455}
[2025-11-24 04:48:15] 2025-11-24 09:46:59,383 | INFO     | --------------------------------------------------
[2025-11-24 04:48:15] 2025-11-24 09:46:59,383 | INFO     | 
[2025-11-24 04:48:15] 2025-11-24 09:46:59,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 04:48:15] 2025-11-24 09:46:59,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | job 6895336179 has completed (purged errors)
[2025-11-24 04:48:15] 2025-11-24 09:46:59,461 | INFO     | overall cleanup function is called
[2025-11-24 04:48:15] 2025-11-24 09:47:00,533 | INFO     | --- collectZombieJob: --- 10, [97663]
[2025-11-24 04:48:15] 2025-11-24 09:47:00,534 | INFO     | zombie collector waiting for pid 97663
[2025-11-24 04:48:15] 2025-11-24 09:47:00,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:48:15] 2025-11-24 09:47:00,534 | INFO     | collected zombie processes
[2025-11-24 04:48:15] 2025-11-24 09:47:00,534 | INFO     | will attempt to kill all subprocesses of pid=97663
[2025-11-24 04:48:15] 2025-11-24 09:47:02,020 | INFO     | process IDs to be killed: [97663] (in reverse order)
[2025-11-24 04:48:15] 2025-11-24 09:47:02,254 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:48:15] 2025-11-24 09:47:02,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:48:15] 2025-11-24 09:47:02,382 | INFO     | did not find any defunct processes belonging to 97663
[2025-11-24 04:48:15] 2025-11-24 09:47:02,400 | INFO     | did not find any defunct processes belonging to 97663
[2025-11-24 04:48:15] 2025-11-24 09:47:02,443 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:48:15] 2025-11-24 09:47:02,443 | INFO     | ready for new job
[2025-11-24 04:48:15] 2025-11-24 09:47:02,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:48:15] 2025-11-24 09:47:02,544 | INFO     | ***************************************
[2025-11-24 04:48:15] 2025-11-24 09:47:02,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:48:15] 2025-11-24 09:47:02,544 | INFO     | ***************************************
[2025-11-24 04:48:15] 2025-11-24 09:47:02,544 | INFO     | 
[2025-11-24 04:48:15] 2025-11-24 09:47:02,556 | INFO     | architecture information:
[2025-11-24 04:48:15] 2025-11-24 09:47:02,557 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:48:15] 2025-11-24 09:47:02,719 | INFO     | cat /etc/os-release:
[2025-11-24 04:48:15] NAME="CentOS Linux"
[2025-11-24 04:48:15] VERSION="7 (Core)"
[2025-11-24 04:48:15] ID="centos"
[2025-11-24 04:48:15] ID_LIKE="rhel fedora"
[2025-11-24 04:48:15] VERSION_ID="7"
[2025-11-24 04:48:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:48:15] ANSI_COLOR="0;31"
[2025-11-24 04:48:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:48:15] HOME_URL="https://www.centos.org/"
[2025-11-24 04:48:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:48:15] 
[2025-11-24 04:48:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:48:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:48:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:48:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:48:15] 
[2025-11-24 04:48:15] 2025-11-24 09:47:02,719 | INFO     | ***************************************
[2025-11-24 04:48:15] 2025-11-24 09:47:03,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 04:48:15] 2025-11-24 09:47:03,604 | INFO     | sufficient remaining disk space (69407342592 B)
[2025-11-24 04:48:15] 2025-11-24 09:47:03,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:48:15] 2025-11-24 09:47:03,605 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:48:15] 2025-11-24 09:47:03,605 | INFO     | update_server=False
[2025-11-24 04:48:15] 2025-11-24 09:47:03,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:48:15] 2025-11-24 09:47:03,684 | INFO     | all data control threads have been joined
[2025-11-24 04:48:15] 2025-11-24 09:47:03,720 | INFO     | all job control threads have been joined
[2025-11-24 04:48:15] 2025-11-24 09:47:03,942 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 04:48:15] 2025-11-24 09:47:03,943 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 04:48:15] 2025-11-24 09:47:03,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:48:15] 2025-11-24 09:47:03,943 | INFO     | will abort loop
[2025-11-24 04:48:15] 2025-11-24 09:47:04,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:48:15] 2025-11-24 09:47:04,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:48:15] 2025-11-24 09:47:04,611 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:04,705 | INFO     | [data] control thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:04,711 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:04,786 | INFO     | [job] control thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:04,959 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,059 | INFO     | all payload control threads have been joined
[2025-11-24 04:48:15] 2025-11-24 09:47:05,238 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,452 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,469 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,732 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,735 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,976 | INFO     | [job] validate thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:05,982 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:06,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:06,077 | INFO     | [payload] control thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:06,112 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:06,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:48:15] 2025-11-24 09:47:10,537 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:48:15] 2025-11-24 09:47:31,247 | INFO     | 102871s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 04:48:15] 2025-11-24 09:47:33,765 | INFO     | PID=80216 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 04:48:15] 2025-11-24 09:47:33,765 | INFO     | .. there are 12 such processes running
[2025-11-24 04:48:15] 2025-11-24 09:47:33,765 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:48:15] 2025-11-24 09:47:33,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:48:15] 2025-11-24 09:47:33,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:48:15] 2025-11-24 09:47:47,925 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:48:15] 2025-11-24 09:47:47,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415513966400)>', '<ExcThread(monitor, started 140414879258368)>']
[2025-11-24 04:48:15] 2025-11-24 09:47:48,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:48:15] 2025-11-24 09:47:48,890 | INFO     | [monitor] control thread has ended
[2025-11-24 04:48:15] 2025-11-24 09:47:53,000 | INFO     | all workflow threads have been joined
[2025-11-24 04:48:15] 2025-11-24 09:47:53,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:48:15] 2025-11-24 09:47:53,001 | INFO     | traces error code: 0
[2025-11-24 04:48:15] 2025-11-24 09:47:53,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:48:15] 2025-11-24 09:47:53,359 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:48:15] 2025-11-24 09:47:53,416 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:48:15] 2025-11-24 09:47:53,443 [wrapper] pilotpid: 80216
[2025-11-24 04:48:15] 2025-11-24 09:47:53,482 [wrapper] Pilot exit status: 0
[2025-11-24 04:48:15] 2025-11-24 09:47:53,688 [wrapper] pandaids: 6895336179
[2025-11-24 04:48:15] 2025-11-24 09:47:54,310 [wrapper] cleanup supervisor_pilot 2451789 80217
[2025-11-24 04:48:15] 2025-11-24 09:47:54,334 [wrapper] Test setup, not cleaning
[2025-11-24 04:48:15] 2025-11-24 09:47:54,377 [wrapper] apfmon messages muted
[2025-11-24 04:48:15] 2025-11-24 09:47:54,405 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:48:15] 2025-11-24 09:47:54,427 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:48:15]  *** Error codes and diagnostics ***
[2025-11-24 04:48:15]     "exeErrorCode": 0,
[2025-11-24 04:48:15]     "exeErrorDiag": "",
[2025-11-24 04:48:15]     "pilotErrorCode": 0,
[2025-11-24 04:48:15]     "pilotErrorDiag": "",
[2025-11-24 04:48:15]  *** Listing of results directory ***
[2025-11-24 04:48:15] total 1323432
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:14 queuedata.json
[2025-11-24 04:48:15] -rwx------. 1 boincer umatlas     36292 Nov 22 00:15 runpilot2-wrapper.sh
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:48:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:11 run_atlas
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:11 job.xml
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas 410012456 Nov 23 00:11 EVNT.47483658._001068.pool.root.1
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:11 start_atlas.sh
[2025-11-24 04:48:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:11 shared
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:11 input.tar.gz
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:11 boinc_lockfile
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 00:11 pandaJob.out
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas        57 Nov 23 00:11 setup.sh.local
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas    989784 Nov 23 00:12 agis_schedconf.cvmfs.json
[2025-11-24 04:48:15] drwx------. 5 boincer umatlas      4096 Nov 23 00:12 pilot3
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas       533 Nov 24 03:25 boinc_task_state.xml
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas 909159752 Nov 24 04:40 HITS.47556149._000547.pool.root.1
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas      1059 Nov 24 04:45 memory_monitor_summary.json
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 04:45 init_data.xml
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas   1526164 Nov 24 04:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas   2680061 Nov 24 04:46 log.47556149._000547.job.log.tgz.1
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas        95 Nov 24 04:46 pilot_heartbeat.json
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas      8624 Nov 24 04:46 heartbeat.json
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas      5125 Nov 24 04:47 pilotlog.txt
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas  13368292 Nov 24 04:47 log.47556149._000547.job.log.1
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas       353 Nov 24 04:47 output.list
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas       620 Nov 24 04:47 runtime_log
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas  16066560 Nov 24 04:47 result.tar.gz
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 04:47 runtime_log.err
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas       664 Nov 24 04:47 fdZMDmE9ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNzJKDmPb7Lon.diag
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas        29 Nov 24 04:48 wrapper_checkpoint.txt
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 04:48 boinc_mmap_file
[2025-11-24 04:48:15] -rw-r--r--. 1 boincer umatlas     21739 Nov 24 04:48 stderr.txt
[2025-11-24 04:48:15] HITS file was successfully produced:
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas 909159752 Nov 24 04:40 shared/HITS.pool.root.1
[2025-11-24 04:48:15]  *** Contents of shared directory: ***
[2025-11-24 04:48:15] total 1304552
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas 410012456 Nov 23 00:11 ATLAS.root_0
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:11 start_atlas.sh
[2025-11-24 04:48:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 23 00:11 input.tar.gz
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas 909159752 Nov 24 04:40 HITS.pool.root.1
[2025-11-24 04:48:15] -rw-------. 1 boincer umatlas  16066560 Nov 24 04:47 result.tar.gz
04:48:17 (74517): run_atlas exited; CPU time 252141.497940
04:48:17 (74517): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN