Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:45 (1063150): wrapper (7.7.26015): starting
16:29:45 (1063150): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 16:29:45] Arguments: --nthreads 12
[2025-11-23 16:29:45] Threads: 12
[2025-11-23 16:29:45] Checking for CVMFS
[2025-11-23 16:29:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 16:29:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 16:29:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 16:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 16:29:45] 2.13.3.0 9008 23118 403240 153213 0 90 43856261 46080001 7335 130560 0 140515511 99.881 50402712 27386 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-23 16:29:45] CVMFS is ok
[2025-11-23 16:29:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 16:29:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 16:29:45] Further information can be found at the LHC@home message board.
[2025-11-23 16:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 16:29:45] Checking for apptainer binary...
[2025-11-23 16:29:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 16:29:45] Running /usr/bin/apptainer --version
[2025-11-23 16:29:45] apptainer version 1.4.3-1.el9
[2025-11-23 16:29:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 16:29:46] mff2103.farm.particle.cz
[2025-11-23 16:29:46] apptainer works
[2025-11-23 16:29:46] Set ATHENA_PROC_NUMBER=12
[2025-11-23 16:29:46] Set ATHENA_CORE_NUMBER=12
[2025-11-23 16:29:46] Starting ATLAS job with PandaID=6894279263
[2025-11-23 16:29:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:03:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:03:37] 2025-11-23 21:02:46,222 | INFO     | time since job start (19969s) is within the limit (172800.0s)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,652 | INFO     | monitor loop #1382: job 0:6894279263 is in state 'finished'
[2025-11-23 22:03:37] 2025-11-23 21:02:46,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 22:03:37] 2025-11-23 21:02:46,910 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2713.5006875
[2025-11-23 22:03:37] 2025-11-23 21:02:46,922 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6894279263/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,923 | INFO     | extracted standard info from prmon json
[2025-11-23 22:03:37] 2025-11-23 21:02:46,923 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:03:37] 2025-11-23 21:02:46,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:03:37] 2025-11-23 21:02:46,927 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:03:37] 2025-11-23 21:02:46,927 | INFO     | sum of square deviations: 10842065229.951086
[2025-11-23 22:03:37] 2025-11-23 21:02:46,929 | INFO     | sum of deviations: 217180685156.4589
[2025-11-23 22:03:37] 2025-11-23 21:02:46,929 | INFO     | mean x: 1763921771.9877677
[2025-11-23 22:03:37] 2025-11-23 21:02:46,929 | INFO     | mean y: 3437221.6146788993
[2025-11-23 22:03:37] 2025-11-23 21:02:46,929 | INFO     | intersect: -35330212860.513336
[2025-11-23 22:03:37] 2025-11-23 21:02:46,929 | INFO     | chi2: 5.041809093855542
[2025-11-23 22:03:37] 2025-11-23 21:02:46,930 | INFO     | sum of square deviations: 10352377812.496971
[2025-11-23 22:03:37] 2025-11-23 21:02:46,931 | INFO     | sum of deviations: 332676531129.2361
[2025-11-23 22:03:37] 2025-11-23 21:02:46,931 | INFO     | mean x: 1763921619.5031056
[2025-11-23 22:03:37] 2025-11-23 21:02:46,931 | INFO     | mean y: 3473127.263975155
[2025-11-23 22:03:37] 2025-11-23 21:02:46,931 | INFO     | intersect: -56680637150.451904
[2025-11-23 22:03:37] 2025-11-23 21:02:46,932 | INFO     | chi2: 2.4158813481909216
[2025-11-23 22:03:37] 2025-11-23 21:02:46,932 | INFO     | current chi2=2.4158813481909216 (change=52.083045922243286 %)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,932 | INFO     | sum of square deviations: 9877608862.971626
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | sum of deviations: 348178659897.78546
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | mean x: 1763921467.0094638
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | mean y: 3478037.738170347
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | intersect: -62173494250.62638
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | chi2: 2.1902530170748675
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | current chi2=2.1902530170748675 (change=9.339379654758739 %)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | right removable region: 316
[2025-11-23 22:03:37] 2025-11-23 21:02:46,934 | INFO     | sum of square deviations: 10352220312.496971
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | sum of deviations: 117355273570.06227
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | mean x: 1763921924.4968944
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | mean y: 3468164.0621118015
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | intersect: -19992777448.646812
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | chi2: 2.9753257957644403
[2025-11-23 22:03:37] 2025-11-23 21:02:46,936 | INFO     | current chi2=2.9753257957644403 (change=40.98694059260449 %)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,937 | INFO     | sum of square deviations: 9877411714.996807
[2025-11-23 22:03:37] 2025-11-23 21:02:46,938 | INFO     | sum of deviations: 92653213272.69086
[2025-11-23 22:03:37] 2025-11-23 21:02:46,938 | INFO     | mean x: 1763922076.9968455
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | mean y: 3476084.690851735
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | intersect: -16542665061.603298
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | chi2: 2.918455192616552
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | current chi2=2.918455192616552 (change=1.9114075920306715 %)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | left removable region: 20
[2025-11-23 22:03:37] 2025-11-23 21:02:46,939 | INFO     | sum of square deviations: 8041647695.878415
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | sum of deviations: 190518450584.03375
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | mean x: 1763922046.5202703
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | mean y: 3530244.0777027025
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | intersect: -41786375004.60665
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | chi2: 0.0199778636539554
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | current memory leak: 23.69 B/s (using 296 data points, chi2=0.02)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,941 | INFO     | could have reported an average CPU frequency of 2717 MHz (14 samples)
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | ..............................
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . Timing measurements:
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . get job = 0 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . initial setup = 1 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . payload setup = 7 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . stage-in = 0 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . payload execution = 19929 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . stage-out = 2 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | . log creation = 0 s
[2025-11-23 22:03:37] 2025-11-23 21:02:46,942 | INFO     | ..............................
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | 
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | job summary report
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | --------------------------------------------------
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | PanDA job id: 6894279263
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | task id: 47533967
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | errors: (none)
[2025-11-23 22:03:37] 2025-11-23 21:02:47,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | pilot state: finished 
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | transexitcode: 0
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | exeerrorcode: 0
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | exeerrordiag: 
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | exitcode: 0
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | exitmsg: OK
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | cpuconsumptiontime: 228103 s
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | nevents: 1000
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | neventsw: 0
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | pid: 1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:47,484 | INFO     | pgrp: 1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | corecount: 12
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | event service: False
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | sizes: {0: 2298637, 1: 2298836, 6: 2299098, 12: 2299126, 19940: 2333583, 19943: 2342579, 19944: 2342763, 19952: 2343009}
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | --------------------------------------------------
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | 
[2025-11-23 22:03:37] 2025-11-23 21:02:47,485 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:03:37] 2025-11-23 21:02:47,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:03:37] 2025-11-23 21:02:47,516 | INFO     | job 6894279263 has completed (purged errors)
[2025-11-23 22:03:37] 2025-11-23 21:02:47,516 | INFO     | overall cleanup function is called
[2025-11-23 22:03:37] 2025-11-23 21:02:48,539 | INFO     | --- collectZombieJob: --- 10, [1074566]
[2025-11-23 22:03:37] 2025-11-23 21:02:48,539 | INFO     | zombie collector waiting for pid 1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:48,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:03:37] 2025-11-23 21:02:48,540 | INFO     | collected zombie processes
[2025-11-23 22:03:37] 2025-11-23 21:02:48,540 | INFO     | will attempt to kill all subprocesses of pid=1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:48,922 | INFO     | process IDs to be killed: [1074566] (in reverse order)
[2025-11-23 22:03:37] 2025-11-23 21:02:49,053 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:03:37] 2025-11-23 21:02:49,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:03:37] 2025-11-23 21:02:49,068 | INFO     | did not find any defunct processes belonging to 1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:49,080 | INFO     | did not find any defunct processes belonging to 1074566
[2025-11-23 22:03:37] 2025-11-23 21:02:49,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:03:37] 2025-11-23 21:02:49,082 | INFO     | ready for new job
[2025-11-23 22:03:37] 2025-11-23 21:02:49,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:03:37] 2025-11-23 21:02:49,085 | INFO     | ***************************************
[2025-11-23 22:03:37] 2025-11-23 21:02:49,085 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:03:37] 2025-11-23 21:02:49,086 | INFO     | ***************************************
[2025-11-23 22:03:37] 2025-11-23 21:02:49,086 | INFO     | 
[2025-11-23 22:03:37] 2025-11-23 21:02:49,092 | INFO     | architecture information:
[2025-11-23 22:03:37] 2025-11-23 21:02:49,093 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:03:37] 2025-11-23 21:02:49,114 | INFO     | cat /etc/os-release:
[2025-11-23 22:03:37] NAME="CentOS Linux"
[2025-11-23 22:03:37] VERSION="7 (Core)"
[2025-11-23 22:03:37] ID="centos"
[2025-11-23 22:03:37] ID_LIKE="rhel fedora"
[2025-11-23 22:03:37] VERSION_ID="7"
[2025-11-23 22:03:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:03:37] ANSI_COLOR="0;31"
[2025-11-23 22:03:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:03:37] HOME_URL="https://www.centos.org/"
[2025-11-23 22:03:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:03:37] 
[2025-11-23 22:03:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:03:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:03:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:03:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:03:37] 
[2025-11-23 22:03:37] 2025-11-23 21:02:49,115 | INFO     | ***************************************
[2025-11-23 22:03:37] 2025-11-23 21:02:49,618 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-11-23 22:03:37] 2025-11-23 21:02:49,641 | INFO     | sufficient remaining disk space (1670863912960 B)
[2025-11-23 22:03:37] 2025-11-23 21:02:49,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:03:37] 2025-11-23 21:02:49,641 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:03:37] 2025-11-23 21:02:49,641 | INFO     | update_server=False
[2025-11-23 22:03:37] 2025-11-23 21:02:49,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:03:37] 2025-11-23 21:02:49,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:03:37] 2025-11-23 21:02:49,756 | INFO     | all payload control threads have been joined
[2025-11-23 22:03:37] 2025-11-23 21:02:50,075 | INFO     | all job control threads have been joined
[2025-11-23 22:03:37] 2025-11-23 21:02:50,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:03:37] 2025-11-23 21:02:50,160 | INFO     | aborting loop
[2025-11-23 22:03:37] 2025-11-23 21:02:50,350 | INFO     | all data control threads have been joined
[2025-11-23 22:03:37] 2025-11-23 21:02:50,644 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:50,667 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:50,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:03:37] 2025-11-23 21:02:50,763 | INFO     | [payload] control thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:50,855 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,080 | INFO     | [job] control thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,166 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,183 | INFO     | [job] validate thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,356 | INFO     | [data] control thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,834 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:51,911 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:52,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:03:37] 2025-11-23 21:02:52,068 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:52,141 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:52,714 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:53,021 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:02:53,648 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:03:37] 2025-11-23 21:03:19,712 | INFO     | PID=1067216 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:03:37] 2025-11-23 21:03:19,713 | INFO     | .. there are 8 such processes running
[2025-11-23 22:03:37] 2025-11-23 21:03:19,713 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:03:37] 2025-11-23 21:03:19,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:03:37] 2025-11-23 21:03:19,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:03:37] 2025-11-23 21:03:30,439 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:03:37] 2025-11-23 21:03:31,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642050963264)>', '<ExcThread(monitor, started 139641684465408)>']
[2025-11-23 22:03:37] 2025-11-23 21:03:32,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:03:37] 2025-11-23 21:03:32,776 | INFO     | [monitor] control thread has ended
[2025-11-23 22:03:37] 2025-11-23 21:03:36,838 | INFO     | all workflow threads have been joined
[2025-11-23 22:03:37] 2025-11-23 21:03:36,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:03:37] 2025-11-23 21:03:36,839 | INFO     | traces error code: 0
[2025-11-23 22:03:37] 2025-11-23 21:03:36,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:03:37] 2025-11-23 21:03:37,002 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:03:37] 2025-11-23 21:03:37,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:03:37] 2025-11-23 21:03:37,010 [wrapper] pilotpid: 1067216
[2025-11-23 22:03:37] 2025-11-23 21:03:37,014 [wrapper] Pilot exit status: 0
[2025-11-23 22:03:37] 2025-11-23 21:03:37,029 [wrapper] pandaids: 6894279263
[2025-11-23 22:03:37] 2025-11-23 21:03:37,118 [wrapper] cleanup supervisor_pilot 1554007 1067217
[2025-11-23 22:03:37] 2025-11-23 21:03:37,122 [wrapper] Test setup, not cleaning
[2025-11-23 22:03:37] 2025-11-23 21:03:37,126 [wrapper] apfmon messages muted
[2025-11-23 22:03:37] 2025-11-23 21:03:37,130 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:03:37] 2025-11-23 21:03:37,133 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:03:37]  *** Error codes and diagnostics ***
[2025-11-23 22:03:37]     "exeErrorCode": 0,
[2025-11-23 22:03:37]     "exeErrorDiag": "",
[2025-11-23 22:03:37]     "pilotErrorCode": 0,
[2025-11-23 22:03:37]     "pilotErrorDiag": "",
[2025-11-23 22:03:37]  *** Listing of results directory ***
[2025-11-23 22:03:37] total 1295004
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc    576529 Nov 21 09:27 pilot3.tar.gz
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc      5112 Nov 21 09:52 queuedata.json
[2025-11-23 22:03:37] -rwx------ 1 boinc boinc     36292 Nov 21 09:52 runpilot2-wrapper.sh
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc       100 Nov 23 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:03:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 16:29 run_atlas
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc       105 Nov 23 16:29 job.xml
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc      6665 Nov 23 16:29 init_data.xml
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc 408306310 Nov 23 16:29 EVNT.47493127._002331.pool.root.1
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc    590103 Nov 23 16:29 input.tar.gz
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:29 start_atlas.sh
[2025-11-23 22:03:37] drwxrwx--x 2 boinc boinc      4096 Nov 23 16:29 shared
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 16:29 boinc_lockfile
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc      2786 Nov 23 16:29 pandaJob.out
[2025-11-23 22:03:37] -rw------- 1 boinc boinc    989785 Nov 23 16:29 agis_schedconf.cvmfs.json
[2025-11-23 22:03:37] drwx------ 5 boinc boinc      4096 Nov 23 16:29 pilot3
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc       533 Nov 23 21:54 boinc_task_state.xml
[2025-11-23 22:03:37] -rw------- 1 boinc boinc 904079193 Nov 23 22:02 HITS.47533967._003030.pool.root.1
[2025-11-23 22:03:37] -rw------- 1 boinc boinc      1034 Nov 23 22:02 memory_monitor_summary.json
[2025-11-23 22:03:37] -rw------- 1 boinc boinc   1526164 Nov 23 22:02 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:03:37] -rw------- 1 boinc boinc   2099402 Nov 23 22:02 log.47533967._003030.job.log.tgz.1
[2025-11-23 22:03:37] -rw------- 1 boinc boinc      8603 Nov 23 22:02 heartbeat.json
[2025-11-23 22:03:37] -rw------- 1 boinc boinc        95 Nov 23 22:03 pilot_heartbeat.json
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc      8192 Nov 23 22:03 boinc_mmap_file
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc        29 Nov 23 22:03 wrapper_checkpoint.txt
[2025-11-23 22:03:37] -rw------- 1 boinc boinc      4826 Nov 23 22:03 pilotlog.txt
[2025-11-23 22:03:37] -rw------- 1 boinc boinc   2785294 Nov 23 22:03 log.47533967._003030.job.log.1
[2025-11-23 22:03:37] -rw------- 1 boinc boinc       353 Nov 23 22:03 output.list
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc       620 Nov 23 22:03 runtime_log
[2025-11-23 22:03:37] -rw------- 1 boinc boinc   4904960 Nov 23 22:03 result.tar.gz
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc      8881 Nov 23 22:03 runtime_log.err
[2025-11-23 22:03:37] -rw------- 1 boinc boinc       671 Nov 23 22:03 o5tLDm13bg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsTHKDmlK1vOm.diag
[2025-11-23 22:03:37] -rw-r--r-- 1 boinc boinc     21361 Nov 23 22:03 stderr.txt
[2025-11-23 22:03:37] HITS file was successfully produced:
[2025-11-23 22:03:37] -rw------- 1 boinc boinc 904079193 Nov 23 22:02 shared/HITS.pool.root.1
[2025-11-23 22:03:37]  *** Contents of shared directory: ***
[2025-11-23 22:03:37] total 1287028
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc 408306310 Nov 23 16:29 ATLAS.root_0
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc    590103 Nov 23 16:29 input.tar.gz
[2025-11-23 22:03:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 16:29 start_atlas.sh
[2025-11-23 22:03:37] -rw------- 1 boinc boinc 904079193 Nov 23 22:02 HITS.pool.root.1
[2025-11-23 22:03:37] -rw------- 1 boinc boinc   4904960 Nov 23 22:03 result.tar.gz
22:03:38 (1063150): run_atlas exited; CPU time 228194.019207
22:03:38 (1063150): called boinc_finish(0)

</stderr_txt>
]]>

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