Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:15:14 (2164959): wrapper (7.7.26015): starting
22:15:14 (2164959): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:15:14] Arguments: --nthreads 8
[2025-11-22 22:15:14] Threads: 8
[2025-11-22 22:15:14] Checking for CVMFS
[2025-11-22 22:15:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:15:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:15:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:15:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:15:15] 2.13.3.0 11836 23697 373144 153195 3 303 17377031 32935937 31994 16776704 0 96627837 99.535 106756492 35930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 22:15:15] CVMFS is ok
[2025-11-22 22:15:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:15:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:15:15] Further information can be found at the LHC@home message board.
[2025-11-22 22:15:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:15:15] Checking for apptainer binary...
[2025-11-22 22:15:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:15:15] Running /usr/bin/apptainer --version
[2025-11-22 22:15:15] apptainer version 1.4.4-1.el9
[2025-11-22 22:15:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:15:16] c6-2-11-1.aglt2.org
[2025-11-22 22:15:16] apptainer works
[2025-11-22 22:15:16] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:15:16] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:15:16] Starting ATLAS job with PandaID=6894285323
[2025-11-22 22:15:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:52:02]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:52:03] 2025-11-23 19:51:29,160 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2643.4180520833334
[2025-11-23 14:52:03] 2025-11-23 19:51:29,178 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894285323/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,179 | INFO     | extracted standard info from prmon json
[2025-11-23 14:52:03] 2025-11-23 19:51:29,179 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:52:03] 2025-11-23 19:51:29,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:52:03] 2025-11-23 19:51:29,195 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:52:03] 2025-11-23 19:51:29,196 | INFO     | sum of square deviations: 290064024482.9403
[2025-11-23 14:52:03] 2025-11-23 19:51:29,239 | INFO     | sum of deviations: 2481708333921.1855
[2025-11-23 14:52:03] 2025-11-23 19:51:29,239 | INFO     | mean x: 1763897661.8936605
[2025-11-23 14:52:03] 2025-11-23 19:51:29,239 | INFO     | mean y: 2893373.626789366
[2025-11-23 14:52:03] 2025-11-23 19:51:29,240 | INFO     | intersect: -15088531822.961304
[2025-11-23 14:52:03] 2025-11-23 19:51:29,241 | INFO     | chi2: 9.838839224415374
[2025-11-23 14:52:03] 2025-11-23 19:51:29,242 | INFO     | sum of square deviations: 285640090860.7053
[2025-11-23 14:52:03] 2025-11-23 19:51:29,261 | INFO     | sum of deviations: 2817418858421.9224
[2025-11-23 14:52:03] 2025-11-23 19:51:29,261 | INFO     | mean x: 1763897509.4316547
[2025-11-23 14:52:03] 2025-11-23 19:51:29,262 | INFO     | mean y: 2904941.931140802
[2025-11-23 14:52:03] 2025-11-23 19:51:29,262 | INFO     | intersect: -17395346446.45568
[2025-11-23 14:52:03] 2025-11-23 19:51:29,263 | INFO     | chi2: 6.562730269668725
[2025-11-23 14:52:03] 2025-11-23 19:51:29,263 | INFO     | current chi2=6.562730269668725 (change=33.29771815578494 %)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,265 | INFO     | sum of square deviations: 281260820841.42834
[2025-11-23 14:52:03] 2025-11-23 19:51:29,282 | INFO     | sum of deviations: 3000380143436.0303
[2025-11-23 14:52:03] 2025-11-23 19:51:29,282 | INFO     | mean x: 1763897356.9597108
[2025-11-23 14:52:03] 2025-11-23 19:51:29,282 | INFO     | mean y: 2911306.257231405
[2025-11-23 14:52:03] 2025-11-23 19:51:29,282 | INFO     | intersect: -18813654005.07344
[2025-11-23 14:52:03] 2025-11-23 19:51:29,284 | INFO     | chi2: 5.301795834518978
[2025-11-23 14:52:03] 2025-11-23 19:51:29,284 | INFO     | current chi2=5.301795834518978 (change=19.21356483257382 %)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,284 | INFO     | right removable region: 967
[2025-11-23 14:52:03] 2025-11-23 19:51:29,285 | INFO     | sum of square deviations: 285635679950.705
[2025-11-23 14:52:03] 2025-11-23 19:51:29,303 | INFO     | sum of deviations: 2105051498000.937
[2025-11-23 14:52:03] 2025-11-23 19:51:29,303 | INFO     | mean x: 1763897814.4316547
[2025-11-23 14:52:03] 2025-11-23 19:51:29,303 | INFO     | mean y: 2906345.4501541625
[2025-11-23 14:52:03] 2025-11-23 19:51:29,303 | INFO     | intersect: -12996505132.94337
[2025-11-23 14:52:03] 2025-11-23 19:51:29,305 | INFO     | chi2: 6.104051341639944
[2025-11-23 14:52:03] 2025-11-23 19:51:29,305 | INFO     | current chi2=6.104051341639944 (change=37.95963931911238 %)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,306 | INFO     | sum of square deviations: 281252710446.00775
[2025-11-23 14:52:03] 2025-11-23 19:51:29,323 | INFO     | sum of deviations: 1922489678423.469
[2025-11-23 14:52:03] 2025-11-23 19:51:29,323 | INFO     | mean x: 1763897966.9679751
[2025-11-23 14:52:03] 2025-11-23 19:51:29,323 | INFO     | mean y: 2912690.7892561983
[2025-11-23 14:52:03] 2025-11-23 19:51:29,323 | INFO     | intersect: -12054128928.15386
[2025-11-23 14:52:03] 2025-11-23 19:51:29,325 | INFO     | chi2: 5.194690179750358
[2025-11-23 14:52:03] 2025-11-23 19:51:29,325 | INFO     | current chi2=5.194690179750358 (change=14.89766568125347 %)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,325 | INFO     | left removable region: 20
[2025-11-23 14:52:03] 2025-11-23 19:51:29,326 | INFO     | sum of square deviations: 263342872041.32
[2025-11-23 14:52:03] 2025-11-23 19:51:29,343 | INFO     | sum of deviations: 2336092578681.2134
[2025-11-23 14:52:03] 2025-11-23 19:51:29,343 | INFO     | mean x: 1763897936.599789
[2025-11-23 14:52:03] 2025-11-23 19:51:29,343 | INFO     | mean y: 2936844.0612460403
[2025-11-23 14:52:03] 2025-11-23 19:51:29,344 | INFO     | intersect: -15644454130.680313
[2025-11-23 14:52:03] 2025-11-23 19:51:29,345 | INFO     | chi2: 0.38907577711996433
[2025-11-23 14:52:03] 2025-11-23 19:51:29,345 | INFO     | current memory leak: 8.87 B/s (using 947 data points, chi2=0.39)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,346 | INFO     | could have reported an average CPU frequency of 2629 MHz (36 samples)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,346 | INFO     | ..............................
[2025-11-23 14:52:03] 2025-11-23 19:51:29,346 | INFO     | . Timing measurements:
[2025-11-23 14:52:03] 2025-11-23 19:51:29,346 | INFO     | . get job = 0 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . initial setup = 3 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . payload setup = 37 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . stage-in = 0 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . payload execution = 59631 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . stage-out = 7 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | . log creation = 2 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,347 | INFO     | ..............................
[2025-11-23 14:52:03] 2025-11-23 19:51:29,362 | INFO     | time since job start (59740s) is within the limit (172800.0s)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,454 | INFO     | 
[2025-11-23 14:52:03] 2025-11-23 19:51:29,454 | INFO     | job summary report
[2025-11-23 14:52:03] 2025-11-23 19:51:29,454 | INFO     | --------------------------------------------------
[2025-11-23 14:52:03] 2025-11-23 19:51:29,454 | INFO     | PanDA job id: 6894285323
[2025-11-23 14:52:03] 2025-11-23 19:51:29,454 | INFO     | task id: 47533967
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | errors: (none)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | pilot state: finished 
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | transexitcode: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | exeerrorcode: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | exeerrordiag: 
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | exitcode: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | exitmsg: OK
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | cpuconsumptiontime: 258807 s
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | nevents: 1000
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | neventsw: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | pid: 2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | pgrp: 2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | corecount: 8
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | event service: False
[2025-11-23 14:52:03] 2025-11-23 19:51:29,455 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298863, 13: 2298863, 16: 2299181, 24: 2299209, 59670: 2351280, 59680: 2360274, 59682: 2360330, 59699: 2360576}
[2025-11-23 14:52:03] 2025-11-23 19:51:29,456 | INFO     | --------------------------------------------------
[2025-11-23 14:52:03] 2025-11-23 19:51:29,456 | INFO     | 
[2025-11-23 14:52:03] 2025-11-23 19:51:29,456 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:52:03] 2025-11-23 19:51:29,513 | INFO     | job 6894285323 has completed (purged errors)
[2025-11-23 14:52:03] 2025-11-23 19:51:29,513 | INFO     | overall cleanup function is called
[2025-11-23 14:52:03] 2025-11-23 19:51:30,529 | INFO     | --- collectZombieJob: --- 10, [2179911]
[2025-11-23 14:52:03] 2025-11-23 19:51:30,553 | INFO     | zombie collector waiting for pid 2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:30,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:52:03] 2025-11-23 19:51:30,553 | INFO     | collected zombie processes
[2025-11-23 14:52:03] 2025-11-23 19:51:30,553 | INFO     | will attempt to kill all subprocesses of pid=2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:32,010 | INFO     | PID=2169195 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 14:52:03] 2025-11-23 19:51:32,010 | INFO     | .. there are 43 such processes running
[2025-11-23 14:52:03] 2025-11-23 19:51:32,112 | INFO     | process IDs to be killed: [2179911] (in reverse order)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,310 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:52:03] 2025-11-23 19:51:32,330 | INFO     | did not find any defunct processes belonging to 2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:32,351 | INFO     | did not find any defunct processes belonging to 2179911
[2025-11-23 14:52:03] 2025-11-23 19:51:32,353 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:52:03] 2025-11-23 19:51:32,353 | INFO     | ready for new job
[2025-11-23 14:52:03] 2025-11-23 19:51:32,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:52:03] 2025-11-23 19:51:32,358 | INFO     | ***************************************
[2025-11-23 14:52:03] 2025-11-23 19:51:32,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:52:03] 2025-11-23 19:51:32,360 | INFO     | ***************************************
[2025-11-23 14:52:03] 2025-11-23 19:51:32,361 | INFO     | 
[2025-11-23 14:52:03] 2025-11-23 19:51:32,366 | INFO     | architecture information:
[2025-11-23 14:52:03] 2025-11-23 19:51:32,367 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:52:03] 2025-11-23 19:51:32,391 | INFO     | cat /etc/os-release:
[2025-11-23 14:52:03] NAME="CentOS Linux"
[2025-11-23 14:52:03] VERSION="7 (Core)"
[2025-11-23 14:52:03] ID="centos"
[2025-11-23 14:52:03] ID_LIKE="rhel fedora"
[2025-11-23 14:52:03] VERSION_ID="7"
[2025-11-23 14:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:52:03] ANSI_COLOR="0;31"
[2025-11-23 14:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:52:03] HOME_URL="https://www.centos.org/"
[2025-11-23 14:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:52:03] 
[2025-11-23 14:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:52:03] 
[2025-11-23 14:52:03] 2025-11-23 19:51:32,391 | INFO     | ***************************************
[2025-11-23 14:52:03] 2025-11-23 19:51:32,895 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-23 14:52:03] 2025-11-23 19:51:32,957 | INFO     | sufficient remaining disk space (88356159488 B)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:52:03] 2025-11-23 19:51:32,957 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:52:03] 2025-11-23 19:51:32,957 | INFO     | update_server=False
[2025-11-23 14:52:03] 2025-11-23 19:51:32,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:52:03] 2025-11-23 19:51:32,958 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,958 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:52:03] 2025-11-23 19:51:32,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:52:03] 2025-11-23 19:51:32,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:52:03] 2025-11-23 19:51:32,980 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 14:52:03] 2025-11-23 19:51:32,981 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 14:52:03] 2025-11-23 19:51:32,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:52:03] 2025-11-23 19:51:32,981 | INFO     | will abort loop
[2025-11-23 14:52:03] 2025-11-23 19:51:33,203 | INFO     | all job control threads have been joined
[2025-11-23 14:52:03] 2025-11-23 19:51:33,963 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:33,992 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,049 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,059 | INFO     | all data control threads have been joined
[2025-11-23 14:52:03] 2025-11-23 19:51:34,098 | INFO     | [job] validate thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,206 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,209 | INFO     | [job] control thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,210 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,232 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,237 | INFO     | all payload control threads have been joined
[2025-11-23 14:52:03] 2025-11-23 19:51:34,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:52:03] 2025-11-23 19:51:34,568 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:34,965 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:35,065 | INFO     | [data] control thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:35,243 | INFO     | [payload] control thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:35,291 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:52:03] 2025-11-23 19:51:35,331 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:35,481 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:35,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:52:03] 2025-11-23 19:51:39,906 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:52:03] 2025-11-23 19:51:40,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302774826816)>', '<ExcThread(monitor, started 140302136366848)>']
[2025-11-23 14:52:03] 2025-11-23 19:51:41,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:52:03] 2025-11-23 19:51:41,009 | INFO     | [monitor] control thread has ended
[2025-11-23 14:52:03] 2025-11-23 19:51:45,428 | INFO     | all workflow threads have been joined
[2025-11-23 14:52:03] 2025-11-23 19:51:45,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:52:03] 2025-11-23 19:51:45,429 | INFO     | traces error code: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:45,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:52:03] 2025-11-23 19:51:45,771 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:52:03] 2025-11-23 19:51:45,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:52:03] 2025-11-23 19:51:45,822 [wrapper] pilotpid: 2169195
[2025-11-23 14:52:03] 2025-11-23 19:51:45,824 [wrapper] Pilot exit status: 0
[2025-11-23 14:52:03] 2025-11-23 19:51:45,843 [wrapper] pandaids: 6894285323
[2025-11-23 14:52:03] 2025-11-23 19:51:45,959 [wrapper] cleanup supervisor_pilot 1634128 2169196
[2025-11-23 14:52:03] 2025-11-23 19:51:45,976 [wrapper] Test setup, not cleaning
[2025-11-23 14:52:03] 2025-11-23 19:51:45,988 [wrapper] apfmon messages muted
[2025-11-23 14:52:03] 2025-11-23 19:51:45,990 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:52:03] 2025-11-23 19:51:45,993 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:52:03]  *** Error codes and diagnostics ***
[2025-11-23 14:52:03]     "exeErrorCode": 0,
[2025-11-23 14:52:03]     "exeErrorDiag": "",
[2025-11-23 14:52:03]     "pilotErrorCode": 0,
[2025-11-23 14:52:03]     "pilotErrorDiag": "",
[2025-11-23 14:52:03]  *** Listing of results directory ***
[2025-11-23 14:52:03] total 1315232
[2025-11-23 14:52:03] -rwx------. 1 boincer umatlas     36292 Nov 21 04:54 runpilot2-wrapper.sh
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 04:54 queuedata.json
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 04:54 pilot3.tar.gz
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas       100 Nov 22 22:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:52:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 22:15 run_atlas
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas       105 Nov 22 22:15 job.xml
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas 409614933 Nov 22 22:15 EVNT.47493127._002359.pool.root.1
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 22:15 start_atlas.sh
[2025-11-23 14:52:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 22:15 shared
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas    590097 Nov 22 22:15 input.tar.gz
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas         0 Nov 22 22:15 boinc_lockfile
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 22:15 pandaJob.out
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas        57 Nov 22 22:15 setup.sh.local
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas    989784 Nov 22 22:15 agis_schedconf.cvmfs.json
[2025-11-23 14:52:03] drwx------. 5 boincer umatlas      4096 Nov 22 22:15 pilot3
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas       533 Nov 23 14:36 boinc_task_state.xml
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas      6878 Nov 23 14:46 init_data.xml
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas 914099817 Nov 23 14:50 HITS.47533967._003308.pool.root.1
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas      1058 Nov 23 14:50 memory_monitor_summary.json
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas   1526164 Nov 23 14:51 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas        95 Nov 23 14:51 pilot_heartbeat.json
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas   2126297 Nov 23 14:51 log.47533967._003308.job.log.tgz.1
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas      8625 Nov 23 14:51 heartbeat.json
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas      4738 Nov 23 14:51 pilotlog.txt
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas   7450649 Nov 23 14:51 log.47533967._003308.job.log.1
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas       353 Nov 23 14:51 output.list
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas       620 Nov 23 14:51 runtime_log
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas   9594880 Nov 23 14:51 result.tar.gz
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas      9348 Nov 23 14:51 runtime_log.err
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas       661 Nov 23 14:51 0NKMDm61cg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiGJKDm4JhwCn.diag
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 14:52 boinc_mmap_file
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas        29 Nov 23 14:52 wrapper_checkpoint.txt
[2025-11-23 14:52:03] -rw-r--r--. 1 boincer umatlas     21385 Nov 23 14:52 stderr.txt
[2025-11-23 14:52:03] HITS file was successfully produced:
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas 914099817 Nov 23 14:50 shared/HITS.pool.root.1
[2025-11-23 14:52:03]  *** Contents of shared directory: ***
[2025-11-23 14:52:03] total 1302668
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas 409614933 Nov 22 22:15 ATLAS.root_0
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 22:15 start_atlas.sh
[2025-11-23 14:52:03] -rw-r--r--. 2 boincer umatlas    590097 Nov 22 22:15 input.tar.gz
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas 914099817 Nov 23 14:50 HITS.pool.root.1
[2025-11-23 14:52:03] -rw-------. 1 boincer umatlas   9594880 Nov 23 14:51 result.tar.gz
14:52:05 (2164959): run_atlas exited; CPU time 261011.891578
14:52:05 (2164959): called boinc_finish(0)

</stderr_txt>
]]>

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