Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:21:47 (392888): wrapper (7.7.26015): starting
22:21:47 (392888): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:21:47] Arguments: --nthreads 8
[2025-11-22 22:21:47] Threads: 8
[2025-11-22 22:21:47] Checking for CVMFS
[2025-11-22 22:21:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:21:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:21:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:21:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:21:48] 2.13.3.0 12388 25137 228948 153195 3 234 27595953 32935936 32888 16776704 0 92471351 99.507 102610837 36099 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 22:21:48] CVMFS is ok
[2025-11-22 22:21:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:21:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:21:48] Further information can be found at the LHC@home message board.
[2025-11-22 22:21:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:21:48] Checking for apptainer binary...
[2025-11-22 22:21:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:21:48] Running /usr/bin/apptainer --version
[2025-11-22 22:21:48] apptainer version 1.4.4-1.el9
[2025-11-22 22:21:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:21:49] c7-4-31.aglt2.org
[2025-11-22 22:21:49] apptainer works
[2025-11-22 22:21:49] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:21:49] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:21:49] Starting ATLAS job with PandaID=6886205293
[2025-11-22 22:21:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:15:54]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:15:54] 2025-11-23 14:14:30,143 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:15:54] 2025-11-23 14:14:30,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:15:54] 2025-11-23 14:14:30,170 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:15:54] 2025-11-23 14:14:30,171 | INFO     | sum of square deviations: 81673457389.91261
[2025-11-23 09:15:54] 2025-11-23 14:14:30,179 | INFO     | sum of deviations: 109265117805.07968
[2025-11-23 09:15:54] 2025-11-23 14:14:30,179 | INFO     | mean x: 1763887707.1123245
[2025-11-23 09:15:54] 2025-11-23 14:14:30,179 | INFO     | mean y: 3366068.0405616225
[2025-11-23 09:15:54] 2025-11-23 14:14:30,179 | INFO     | intersect: -2356414015.621772
[2025-11-23 09:15:54] 2025-11-23 14:14:30,180 | INFO     | chi2: 8.415523046932107
[2025-11-23 09:15:54] 2025-11-23 14:14:30,180 | INFO     | sum of square deviations: 79777591034.68393
[2025-11-23 09:15:54] 2025-11-23 14:14:30,188 | INFO     | sum of deviations: 393235430632.1699
[2025-11-23 09:15:54] 2025-11-23 14:14:30,189 | INFO     | mean x: 1763887554.6273584
[2025-11-23 09:15:54] 2025-11-23 14:14:30,189 | INFO     | mean y: 3388911.220125786
[2025-11-23 09:15:54] 2025-11-23 14:14:30,189 | INFO     | intersect: -8691071188.84803
[2025-11-23 09:15:54] 2025-11-23 14:14:30,189 | INFO     | chi2: 4.463657014470373
[2025-11-23 09:15:54] 2025-11-23 14:14:30,190 | INFO     | current chi2=4.463657014470373 (change=46.959244368089436 %)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,190 | INFO     | sum of square deviations: 77911268202.44695
[2025-11-23 09:15:54] 2025-11-23 14:14:30,198 | INFO     | sum of deviations: 578352647758.719
[2025-11-23 09:15:54] 2025-11-23 14:14:30,198 | INFO     | mean x: 1763887402.141046
[2025-11-23 09:15:54] 2025-11-23 14:14:30,199 | INFO     | mean y: 3404008.87955626
[2025-11-23 09:15:54] 2025-11-23 14:14:30,199 | INFO     | intersect: -13090323932.061375
[2025-11-23 09:15:54] 2025-11-23 14:14:30,199 | INFO     | chi2: 2.4581565842841107
[2025-11-23 09:15:54] 2025-11-23 14:14:30,199 | INFO     | current chi2=2.4581565842841107 (change=44.92953700709509 %)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,200 | INFO     | sum of square deviations: 76073599262.53029
[2025-11-23 09:15:54] 2025-11-23 14:14:30,208 | INFO     | sum of deviations: 618963051960.2135
[2025-11-23 09:15:54] 2025-11-23 14:14:30,208 | INFO     | mean x: 1763887249.626198
[2025-11-23 09:15:54] 2025-11-23 14:14:30,208 | INFO     | mean y: 3407367.0479233228
[2025-11-23 09:15:54] 2025-11-23 14:14:30,208 | INFO     | intersect: -14348234279.019037
[2025-11-23 09:15:54] 2025-11-23 14:14:30,209 | INFO     | chi2: 2.2928345144733484
[2025-11-23 09:15:54] 2025-11-23 14:14:30,209 | INFO     | current chi2=2.2928345144733484 (change=6.725449097414152 %)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,209 | INFO     | right removable region: 625
[2025-11-23 09:15:54] 2025-11-23 14:14:30,210 | INFO     | sum of square deviations: 79776804192.4276
[2025-11-23 09:15:54] 2025-11-23 14:14:30,218 | INFO     | sum of deviations: -88543889542.9306
[2025-11-23 09:15:54] 2025-11-23 14:14:30,218 | INFO     | mean x: 1763887859.6289308
[2025-11-23 09:15:54] 2025-11-23 14:14:30,218 | INFO     | mean y: 3381941.072327044
[2025-11-23 09:15:54] 2025-11-23 14:14:30,218 | INFO     | intersect: 1961112554.502002
[2025-11-23 09:15:54] 2025-11-23 14:14:30,219 | INFO     | chi2: 6.2472944279445
[2025-11-23 09:15:54] 2025-11-23 14:14:30,219 | INFO     | current chi2=6.2472944279445 (change=25.764632892046297 %)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,220 | INFO     | sum of square deviations: 77909771865.87671
[2025-11-23 09:15:54] 2025-11-23 14:14:30,228 | INFO     | sum of deviations: -112184128635.59148
[2025-11-23 09:15:54] 2025-11-23 14:14:30,228 | INFO     | mean x: 1763888012.1442156
[2025-11-23 09:15:54] 2025-11-23 14:14:30,228 | INFO     | mean y: 3383869.522979398
[2025-11-23 09:15:54] 2025-11-23 14:14:30,228 | INFO     | intersect: 2543248060.035812
[2025-11-23 09:15:54] 2025-11-23 14:14:30,229 | INFO     | chi2: 6.227407865505005
[2025-11-23 09:15:54] 2025-11-23 14:14:30,229 | INFO     | current chi2=6.227407865505005 (change=0.3183227982747504 %)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,229 | INFO     | left removable region: 20
[2025-11-23 09:15:54] 2025-11-23 14:14:30,230 | INFO     | sum of square deviations: 68670611376.77698
[2025-11-23 09:15:54] 2025-11-23 14:14:30,237 | INFO     | sum of deviations: 368592189311.1488
[2025-11-23 09:15:54] 2025-11-23 14:14:30,237 | INFO     | mean x: 1763887829.1735537
[2025-11-23 09:15:54] 2025-11-23 14:14:30,237 | INFO     | mean y: 3428212.4842975205
[2025-11-23 09:15:54] 2025-11-23 14:14:30,238 | INFO     | intersect: -9464308620.192852
[2025-11-23 09:15:54] 2025-11-23 14:14:30,238 | INFO     | chi2: 0.04080844778037461
[2025-11-23 09:15:54] 2025-11-23 14:14:30,238 | INFO     | current memory leak: 5.37 B/s (using 605 data points, chi2=0.04)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,239 | INFO     | could have reported an average CPU frequency of 3164 MHz (25 samples)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,239 | INFO     | ..............................
[2025-11-23 09:15:54] 2025-11-23 14:14:30,239 | INFO     | . Timing measurements:
[2025-11-23 09:15:54] 2025-11-23 14:14:30,239 | INFO     | . get job = 0 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . initial setup = 3 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . payload setup = 21 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . stage-in = 0 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . payload execution = 39061 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . stage-out = 4 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | . log creation = 1 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,240 | INFO     | ..............................
[2025-11-23 09:15:54] 2025-11-23 14:14:30,417 | INFO     | 
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | job summary report
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | --------------------------------------------------
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | PanDA job id: 6886205293
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | task id: 47450870
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | errors: (none)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | pilot state: finished 
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | transexitcode: 0
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | exeerrorcode: 0
[2025-11-23 09:15:54] 2025-11-23 14:14:30,418 | INFO     | exeerrordiag: 
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | exitcode: 0
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | exitmsg: OK
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | cpuconsumptiontime: 127666 s
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | nevents: 1000
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | neventsw: 0
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | pid: 405567
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | pgrp: 405567
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | corecount: 8
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | event service: False
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | sizes: {0: 2299005, 11: 2299295, 39086: 2361770, 39091: 2370764, 39094: 2370820, 39114: 2371130}
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | --------------------------------------------------
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | 
[2025-11-23 09:15:54] 2025-11-23 14:14:30,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 09:15:54] 2025-11-23 14:14:30,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | job 6886205293 has completed (purged errors)
[2025-11-23 09:15:54] 2025-11-23 14:14:30,477 | INFO     | overall cleanup function is called
[2025-11-23 09:15:54] 2025-11-23 14:14:31,514 | INFO     | --- collectZombieJob: --- 10, [405567]
[2025-11-23 09:15:54] 2025-11-23 14:14:31,515 | INFO     | zombie collector waiting for pid 405567
[2025-11-23 09:15:54] 2025-11-23 14:14:31,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:15:54] 2025-11-23 14:14:31,515 | INFO     | collected zombie processes
[2025-11-23 09:15:54] 2025-11-23 14:14:31,515 | INFO     | will attempt to kill all subprocesses of pid=405567
[2025-11-23 09:15:54] 2025-11-23 14:14:32,534 | INFO     | process IDs to be killed: [405567] (in reverse order)
[2025-11-23 09:15:54] 2025-11-23 14:14:32,741 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:15:54] 2025-11-23 14:14:32,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:15:54] 2025-11-23 14:14:32,849 | INFO     | did not find any defunct processes belonging to 405567
[2025-11-23 09:15:54] 2025-11-23 14:14:32,889 | INFO     | did not find any defunct processes belonging to 405567
[2025-11-23 09:15:54] 2025-11-23 14:14:32,890 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:15:54] 2025-11-23 14:14:32,891 | INFO     | ready for new job
[2025-11-23 09:15:54] 2025-11-23 14:14:32,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:15:54] 2025-11-23 14:14:32,894 | INFO     | ***************************************
[2025-11-23 09:15:54] 2025-11-23 14:14:32,894 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:15:54] 2025-11-23 14:14:32,894 | INFO     | ***************************************
[2025-11-23 09:15:54] 2025-11-23 14:14:32,894 | INFO     | 
[2025-11-23 09:15:54] 2025-11-23 14:14:32,900 | INFO     | architecture information:
[2025-11-23 09:15:54] 2025-11-23 14:14:32,901 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:15:54] 2025-11-23 14:14:32,936 | INFO     | cat /etc/os-release:
[2025-11-23 09:15:54] NAME="CentOS Linux"
[2025-11-23 09:15:54] VERSION="7 (Core)"
[2025-11-23 09:15:54] ID="centos"
[2025-11-23 09:15:54] ID_LIKE="rhel fedora"
[2025-11-23 09:15:54] VERSION_ID="7"
[2025-11-23 09:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:15:54] ANSI_COLOR="0;31"
[2025-11-23 09:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:15:54] HOME_URL="https://www.centos.org/"
[2025-11-23 09:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:15:54] 
[2025-11-23 09:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:15:54] 
[2025-11-23 09:15:54] 2025-11-23 14:14:32,937 | INFO     | ***************************************
[2025-11-23 09:15:54] 2025-11-23 14:14:33,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 09:15:54] 2025-11-23 14:14:33,568 | INFO     | sufficient remaining disk space (65461551104 B)
[2025-11-23 09:15:54] 2025-11-23 14:14:33,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:15:54] 2025-11-23 14:14:33,569 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:15:54] 2025-11-23 14:14:33,569 | INFO     | update_server=False
[2025-11-23 09:15:54] 2025-11-23 14:14:33,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:15:54] 2025-11-23 14:14:33,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:15:54] 2025-11-23 14:14:33,627 | INFO     | all job control threads have been joined
[2025-11-23 09:15:54] 2025-11-23 14:14:33,886 | INFO     | all data control threads have been joined
[2025-11-23 09:15:54] 2025-11-23 14:14:34,349 | INFO     | all payload control threads have been joined
[2025-11-23 09:15:54] 2025-11-23 14:14:34,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:15:54] 2025-11-23 14:14:34,509 | INFO     | aborting loop
[2025-11-23 09:15:54] 2025-11-23 14:14:34,575 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:34,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:15:54] 2025-11-23 14:14:34,634 | INFO     | [job] control thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:34,834 | INFO     | [job] validate thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:34,857 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:34,893 | INFO     | [data] control thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,229 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,289 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,355 | INFO     | [payload] control thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,399 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:15:54] 2025-11-23 14:14:35,522 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,575 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,627 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:35,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:36,443 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:14:38,599 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:15:54] 2025-11-23 14:15:03,515 | INFO     | PID=397694 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 09:15:54] 2025-11-23 14:15:03,515 | INFO     | .. there are 48 such processes running
[2025-11-23 09:15:54] 2025-11-23 14:15:03,517 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:15:54] 2025-11-23 14:15:03,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:15:54] 2025-11-23 14:15:03,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:15:54] 2025-11-23 14:15:22,453 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:15:54] 2025-11-23 14:15:23,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820837640000)>', '<ExcThread(monitor, started 139820336654080)>']
[2025-11-23 09:15:54] 2025-11-23 14:15:23,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:15:54] 2025-11-23 14:15:23,644 | INFO     | [monitor] control thread has ended
[2025-11-23 09:15:54] 2025-11-23 14:15:28,485 | INFO     | all workflow threads have been joined
[2025-11-23 09:15:54] 2025-11-23 14:15:28,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:15:54] 2025-11-23 14:15:28,486 | INFO     | traces error code: 0
[2025-11-23 09:15:54] 2025-11-23 14:15:28,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:15:54] 2025-11-23 14:15:28,656 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:15:54] 2025-11-23 14:15:28,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:15:54] 2025-11-23 14:15:28,691 [wrapper] pilotpid: 397694
[2025-11-23 09:15:54] 2025-11-23 14:15:28,733 [wrapper] Pilot exit status: 0
[2025-11-23 09:15:54] 2025-11-23 14:15:28,785 [wrapper] pandaids: 6886205293
[2025-11-23 09:15:54] 2025-11-23 14:15:28,955 [wrapper] cleanup supervisor_pilot 3013379 397695
[2025-11-23 09:15:54] 2025-11-23 14:15:28,961 [wrapper] Test setup, not cleaning
[2025-11-23 09:15:54] 2025-11-23 14:15:28,965 [wrapper] apfmon messages muted
[2025-11-23 09:15:54] 2025-11-23 14:15:28,970 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:15:54] 2025-11-23 14:15:28,975 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:15:54]  *** Error codes and diagnostics ***
[2025-11-23 09:15:54]     "exeErrorCode": 0,
[2025-11-23 09:15:54]     "exeErrorDiag": "",
[2025-11-23 09:15:54]     "pilotErrorCode": 0,
[2025-11-23 09:15:54]     "pilotErrorDiag": "",
[2025-11-23 09:15:54]  *** Listing of results directory ***
[2025-11-23 09:15:54] total 939980
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 14 09:59 pilot3.tar.gz
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 14 10:00 queuedata.json
[2025-11-23 09:15:54] -rwx------. 1 boincer umatlas     36292 Nov 14 10:02 runpilot2-wrapper.sh
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas       100 Nov 22 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:15:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 22:21 run_atlas
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas       105 Nov 22 22:21 job.xml
[2025-11-23 09:15:54] -rw-r--r--. 2 boincer umatlas 379198964 Nov 22 22:21 EVNT.14545720._000225.pool.root.1
[2025-11-23 09:15:54] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 22:21 start_atlas.sh
[2025-11-23 09:15:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 22:21 shared
[2025-11-23 09:15:54] -rw-r--r--. 2 boincer umatlas    590125 Nov 22 22:21 input.tar.gz
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas         0 Nov 22 22:21 boinc_lockfile
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas      2930 Nov 22 22:21 pandaJob.out
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas    989784 Nov 22 22:22 agis_schedconf.cvmfs.json
[2025-11-23 09:15:54] drwx------. 5 boincer umatlas      4096 Nov 22 22:22 pilot3
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas       532 Nov 23 08:59 boinc_task_state.xml
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas      6946 Nov 23 09:10 init_data.xml
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas 565428250 Nov 23 09:13 HITS.47450870._002064.pool.root.1
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas      1068 Nov 23 09:13 memory_monitor_summary.json
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas   1526164 Nov 23 09:14 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas   1925516 Nov 23 09:14 log.47450870._002064.job.log.tgz.1
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas     28005 Nov 23 09:14 heartbeat.json
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas        95 Nov 23 09:15 pilot_heartbeat.json
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas      4823 Nov 23 09:15 pilotlog.txt
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas   5049582 Nov 23 09:15 log.47450870._002064.job.log.1
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas       353 Nov 23 09:15 output.list
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas       620 Nov 23 09:15 runtime_log
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas   7014400 Nov 23 09:15 result.tar.gz
[2025-11-23 09:15:54] -rw-------. 1 boincer umatlas       663 Nov 23 09:15 V8MLDmcUAe8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeuJODmVZUEdn.diag
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas      8699 Nov 23 09:15 runtime_log.err
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas        29 Nov 23 09:15 wrapper_checkpoint.txt
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 09:15 boinc_mmap_file
[2025-11-23 09:15:54] -rw-r--r--. 1 boincer umatlas     21082 Nov 23 09:15 stderr.txt
[2025-11-23 09:15:54] HITS file was successfully produced:
[2025-11-23 09:15:55] -rw-------. 1 boincer umatlas 565428250 Nov 23 09:13 shared/HITS.pool.root.1
[2025-11-23 09:15:55]  *** Contents of shared directory: ***
[2025-11-23 09:15:55] total 929948
[2025-11-23 09:15:55] -rw-r--r--. 2 boincer umatlas 379198964 Nov 22 22:21 ATLAS.root_0
[2025-11-23 09:15:55] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 22:21 start_atlas.sh
[2025-11-23 09:15:55] -rw-r--r--. 2 boincer umatlas    590125 Nov 22 22:21 input.tar.gz
[2025-11-23 09:15:55] -rw-------. 1 boincer umatlas 565428250 Nov 23 09:13 HITS.pool.root.1
[2025-11-23 09:15:55] -rw-------. 1 boincer umatlas   7014400 Nov 23 09:15 result.tar.gz
09:15:57 (392888): run_atlas exited; CPU time 128306.818560
09:15:57 (392888): called boinc_finish(0)

</stderr_txt>
]]>

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