Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:20:08 (2679162): wrapper (7.7.26015): starting
00:20:08 (2679162): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 00:20:08] Arguments: --nthreads 4
[2025-11-26 00:20:08] Threads: 4
[2025-11-26 00:20:08] Checking for CVMFS
[2025-11-26 00:20:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:20:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:20:08] 2.9.2.0 1155370 10552 106360 153302 3 81 34525621 36864000 0 130560 0 4438620 99.937 547963 8342 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 00:20:08] CVMFS is ok
[2025-11-26 00:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:20:08] Further information can be found at the LHC@home message board.
[2025-11-26 00:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:20:08] Checking for apptainer binary...
[2025-11-26 00:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:20:08] Running /usr/bin/apptainer --version
[2025-11-26 00:20:08] apptainer version 1.4.1-1.1
[2025-11-26 00:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:20:08] thA369a
[2025-11-26 00:20:08] apptainer works
[2025-11-26 00:20:08] Set ATHENA_PROC_NUMBER=4
[2025-11-26 00:20:08] Set ATHENA_CORE_NUMBER=4
[2025-11-26 00:20:08] Starting ATLAS job with PandaID=6895336019
[2025-11-26 00:20:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:12:45]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:12:45] 2025-11-26 05:11:58,282 | INFO     | cat /etc/os-release:
[2025-11-26 06:12:45] NAME="CentOS Linux"
[2025-11-26 06:12:45] VERSION="7 (Core)"
[2025-11-26 06:12:45] ID="centos"
[2025-11-26 06:12:45] ID_LIKE="rhel fedora"
[2025-11-26 06:12:45] VERSION_ID="7"
[2025-11-26 06:12:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:12:45] ANSI_COLOR="0;31"
[2025-11-26 06:12:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:12:45] HOME_URL="https://www.centos.org/"
[2025-11-26 06:12:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:12:45] 
[2025-11-26 06:12:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:12:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:12:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:12:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:12:45] 
[2025-11-26 06:12:45] 2025-11-26 05:11:58,283 | INFO     | ***************************************
[2025-11-26 06:12:45] 2025-11-26 05:11:58,786 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 06:12:45] 2025-11-26 05:11:58,798 | INFO     | sufficient remaining disk space (221457154048 B)
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | INFO     | update_server=False
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:12:45] 2025-11-26 05:11:58,799 | INFO     | aborting loop
[2025-11-26 06:12:45] 2025-11-26 05:11:58,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:12:45] 2025-11-26 05:11:58,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:12:45] 2025-11-26 05:11:58,964 | INFO     | all job control threads have been joined
[2025-11-26 06:12:45] 2025-11-26 05:11:59,303 | INFO     | all data control threads have been joined
[2025-11-26 06:12:45] 2025-11-26 05:11:59,804 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:11:59,805 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:11:59,805 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:11:59,805 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:11:59,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:12:45] 2025-11-26 05:11:59,970 | INFO     | [job] control thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:00,116 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:00,210 | INFO     | all payload control threads have been joined
[2025-11-26 06:12:45] 2025-11-26 05:12:00,286 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:00,309 | INFO     | [data] control thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:00,873 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:01,071 | INFO     | [job] validate thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:01,072 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:01,120 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:01,216 | INFO     | [payload] control thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:01,911 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:02,806 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:08,844 | INFO     | job.realtimelogging is not enabled
[2025-11-26 06:12:45] 2025-11-26 05:12:09,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:12:45] 2025-11-26 05:12:40,190 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:12:45] 2025-11-26 05:12:40,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057549420352)>', '<ExcThread(monitor, started 140056937363200)>']
[2025-11-26 06:12:45] 2025-11-26 05:12:41,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:12:45] 2025-11-26 05:12:41,018 | INFO     | [monitor] control thread has ended
[2025-11-26 06:12:45] 2025-11-26 05:12:45,532 | INFO     | all workflow threads have been joined
[2025-11-26 06:12:45] 2025-11-26 05:12:45,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:12:45] 2025-11-26 05:12:45,533 | INFO     | traces error code: 0
[2025-11-26 06:12:45] 2025-11-26 05:12:45,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:12:45] 2025-11-26 05:12:45,629 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:12:45] 2025-11-26 05:12:45,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:12:45] 2025-11-26 05:12:45,634 [wrapper] pilotpid: 2682941
[2025-11-26 06:12:45] 2025-11-26 05:12:45,637 [wrapper] Pilot exit status: 0
[2025-11-26 06:12:45] 2025-11-26 05:12:45,644 [wrapper] pandaids: 6895336019
[2025-11-26 06:12:45] 2025-11-26 05:12:45,662 [wrapper] cleanup supervisor_pilot 2728227 2682942
[2025-11-26 06:12:45] 2025-11-26 05:12:45,665 [wrapper] Test setup, not cleaning
[2025-11-26 06:12:45] 2025-11-26 05:12:45,667 [wrapper] apfmon messages muted
[2025-11-26 06:12:45] 2025-11-26 05:12:45,669 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:12:45] 2025-11-26 05:12:45,671 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:12:45]  *** Error codes and diagnostics ***
[2025-11-26 06:12:45]     "exeErrorCode": 0,
[2025-11-26 06:12:45]     "exeErrorDiag": "",
[2025-11-26 06:12:45]     "pilotErrorCode": 0,
[2025-11-26 06:12:45]     "pilotErrorDiag": "",
[2025-11-26 06:12:45]  *** Listing of results directory ***
[2025-11-26 06:12:45] total 1298616
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc    576529 Nov 22 05:55 pilot3.tar.gz
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      5112 Nov 22 06:06 queuedata.json
[2025-11-26 06:12:45] -rwx------ 1 boinc boinc     36292 Nov 22 06:08 runpilot2-wrapper.sh
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc       100 Nov 26 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:12:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 00:20 run_atlas
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc       105 Nov 26 00:20 job.xml
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc 409671862 Nov 26 00:20 EVNT.47483658._001066.pool.root.1
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc    590098 Nov 26 00:20 input.tar.gz
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc     15847 Nov 26 00:20 start_atlas.sh
[2025-11-26 06:12:45] drwxrwx--x 2 boinc boinc      4096 Nov 26 00:20 shared
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc         0 Nov 26 00:20 boinc_setup_complete
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      6444 Nov 26 00:20 init_data.xml
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc         0 Nov 26 00:20 boinc_lockfile
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      2784 Nov 26 00:20 pandaJob.out
[2025-11-26 06:12:45] -rw------- 1 boinc boinc    991877 Nov 26 00:20 agis_schedconf.cvmfs.json
[2025-11-26 06:12:45] drwx------ 5 boinc boinc      4096 Nov 26 00:20 pilot3
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc       531 Nov 26 06:07 boinc_task_state.xml
[2025-11-26 06:12:45] -rw------- 1 boinc boinc        95 Nov 26 06:11 pilot_heartbeat.json
[2025-11-26 06:12:45] -rw------- 1 boinc boinc 907825753 Nov 26 06:11 HITS.47556149._000525.pool.root.1
[2025-11-26 06:12:45] -rw------- 1 boinc boinc      1023 Nov 26 06:11 memory_monitor_summary.json
[2025-11-26 06:12:45] -rw------- 1 boinc boinc   1516240 Nov 26 06:11 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:12:45] -rw------- 1 boinc boinc   1203007 Nov 26 06:11 log.47556149._000525.job.log.tgz.1
[2025-11-26 06:12:45] -rw------- 1 boinc boinc      8562 Nov 26 06:11 heartbeat.json
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc        28 Nov 26 06:12 wrapper_checkpoint.txt
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      8192 Nov 26 06:12 boinc_mmap_file
[2025-11-26 06:12:45] -rw------- 1 boinc boinc      4628 Nov 26 06:12 pilotlog.txt
[2025-11-26 06:12:45] -rw------- 1 boinc boinc   2983275 Nov 26 06:12 log.47556149._000525.job.log.1
[2025-11-26 06:12:45] -rw------- 1 boinc boinc       353 Nov 26 06:12 output.list
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc       620 Nov 26 06:12 runtime_log
[2025-11-26 06:12:45] -rw------- 1 boinc boinc   4208640 Nov 26 06:12 result.tar.gz
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      8903 Nov 26 06:12 runtime_log.err
[2025-11-26 06:12:45] -rw------- 1 boinc boinc       666 Nov 26 06:12 0KnLDmk2ug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoxJKDmbEP9Sm.diag
[2025-11-26 06:12:45] -rw-r--r-- 1 boinc boinc      8806 Nov 26 06:12 stderr.txt
[2025-11-26 06:12:45] HITS file was successfully produced:
[2025-11-26 06:12:45] -rw------- 1 boinc boinc 907825753 Nov 26 06:11 shared/HITS.pool.root.1
[2025-11-26 06:12:45]  *** Contents of shared directory: ***
[2025-11-26 06:12:45] total 1291340
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc 409671862 Nov 26 00:20 ATLAS.root_0
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc    590098 Nov 26 00:20 input.tar.gz
[2025-11-26 06:12:45] -rw-r--r-- 2 boinc boinc     15847 Nov 26 00:20 start_atlas.sh
[2025-11-26 06:12:45] -rw------- 1 boinc boinc 907825753 Nov 26 06:11 HITS.pool.root.1
[2025-11-26 06:12:45] -rw------- 1 boinc boinc   4208640 Nov 26 06:12 result.tar.gz
06:12:47 (2679162): run_atlas exited; CPU time 82361.223161
06:12:47 (2679162): called boinc_finish(0)

</stderr_txt>
]]>

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