Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:29:25 (20890): wrapper (7.7.26015): starting
22:29:25 (20890): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:29:25] Arguments: --nthreads 8
[2025-11-22 22:29:25] Threads: 8
[2025-11-22 22:29:25] Checking for CVMFS
[2025-11-22 22:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:29:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:29:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:29:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:29:26] 2.11.2.0 8814 112803 130328 153195 0 82 11213179 18432001 1885 130560 0 80600547 99.972 4834609 31550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 22:29:26] CVMFS is ok
[2025-11-22 22:29:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:29:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:29:26] Further information can be found at the LHC@home message board.
[2025-11-22 22:29:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:29:26] Checking for apptainer binary...
[2025-11-22 22:29:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:29:26] Running /usr/bin/apptainer --version
[2025-11-22 22:29:26] apptainer version 1.3.2-1.el7
[2025-11-22 22:29:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:29:27] c-206-19.aglt2.org
[2025-11-22 22:29:27] apptainer works
[2025-11-22 22:29:27] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:29:27] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:29:27] Starting ATLAS job with PandaID=6894281059
[2025-11-22 22:29:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:25:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:25:37] 2025-11-23 22:24:42,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:25:37] 2025-11-23 22:24:42,865 | INFO     | time since job start (68104s) is within the limit (172800.0s)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,504 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:25:37] 2025-11-23 22:24:44,507 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1962.0833333333333
[2025-11-23 17:25:37] 2025-11-23 22:24:44,510 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894281059/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,511 | INFO     | extracted standard info from prmon json
[2025-11-23 17:25:37] 2025-11-23 22:24:44,511 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:25:37] 2025-11-23 22:24:44,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:25:37] 2025-11-23 22:24:44,526 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:25:37] 2025-11-23 22:24:44,527 | INFO     | sum of square deviations: 430992362172.91296
[2025-11-23 17:25:37] 2025-11-23 22:24:44,549 | INFO     | sum of deviations: 2182033828550.9622
[2025-11-23 17:25:37] 2025-11-23 22:24:44,549 | INFO     | mean x: 1763902611.140681
[2025-11-23 17:25:37] 2025-11-23 22:24:44,549 | INFO     | mean y: 2866018.1021505375
[2025-11-23 17:25:37] 2025-11-23 22:24:44,549 | INFO     | intersect: -8927443438.830112
[2025-11-23 17:25:37] 2025-11-23 22:24:44,550 | INFO     | chi2: 4.4052001619643555
[2025-11-23 17:25:37] 2025-11-23 22:24:44,551 | INFO     | sum of square deviations: 425225569790.8518
[2025-11-23 17:25:37] 2025-11-23 22:24:44,573 | INFO     | sum of deviations: 2456620107421.0596
[2025-11-23 17:25:37] 2025-11-23 22:24:44,573 | INFO     | mean x: 1763902458.6435645
[2025-11-23 17:25:37] 2025-11-23 22:24:44,573 | INFO     | mean y: 2873273.2880288027
[2025-11-23 17:25:37] 2025-11-23 22:24:44,573 | INFO     | intersect: -10187572822.332556
[2025-11-23 17:25:37] 2025-11-23 22:24:44,574 | INFO     | chi2: 2.4262559103495933
[2025-11-23 17:25:37] 2025-11-23 22:24:44,574 | INFO     | current chi2=2.4262559103495933 (change=44.92291334912502 %)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,575 | INFO     | sum of square deviations: 419510385269.56305
[2025-11-23 17:25:37] 2025-11-23 22:24:44,597 | INFO     | sum of deviations: 2501305363989.4937
[2025-11-23 17:25:37] 2025-11-23 22:24:44,597 | INFO     | mean x: 1763902306.1455696
[2025-11-23 17:25:37] 2025-11-23 22:24:44,597 | INFO     | mean y: 2874462.9783001808
[2025-11-23 17:25:37] 2025-11-23 22:24:44,597 | INFO     | intersect: -10514286624.893967
[2025-11-23 17:25:37] 2025-11-23 22:24:44,598 | INFO     | chi2: 2.277723118392479
[2025-11-23 17:25:37] 2025-11-23 22:24:44,599 | INFO     | current chi2=2.277723118392479 (change=6.121893050255886 %)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,599 | INFO     | right removable region: 1105
[2025-11-23 17:25:37] 2025-11-23 22:24:44,600 | INFO     | sum of square deviations: 425225133640.8519
[2025-11-23 17:25:37] 2025-11-23 22:24:44,622 | INFO     | sum of deviations: 1893165453628.3164
[2025-11-23 17:25:37] 2025-11-23 22:24:44,622 | INFO     | mean x: 1763902763.6435645
[2025-11-23 17:25:37] 2025-11-23 22:24:44,622 | INFO     | mean y: 2873647.8694869485
[2025-11-23 17:25:37] 2025-11-23 22:24:44,622 | INFO     | intersect: -7850283448.225298
[2025-11-23 17:25:37] 2025-11-23 22:24:44,623 | INFO     | chi2: 2.380481433175859
[2025-11-23 17:25:37] 2025-11-23 22:24:44,623 | INFO     | current chi2=2.380481433175859 (change=45.96201430914411 %)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,624 | INFO     | sum of square deviations: 419509716038.8542
[2025-11-23 17:25:37] 2025-11-23 22:24:44,646 | INFO     | sum of deviations: 1815909460092.468
[2025-11-23 17:25:37] 2025-11-23 22:24:44,646 | INFO     | mean x: 1763902916.1446655
[2025-11-23 17:25:37] 2025-11-23 22:24:44,646 | INFO     | mean y: 2875708.909584087
[2025-11-23 17:25:37] 2025-11-23 22:24:44,646 | INFO     | intersect: -7632437299.705276
[2025-11-23 17:25:37] 2025-11-23 22:24:44,647 | INFO     | chi2: 2.3208230636789584
[2025-11-23 17:25:37] 2025-11-23 22:24:44,647 | INFO     | current chi2=2.3208230636789584 (change=2.50614722994536 %)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,647 | INFO     | left removable region: 20
[2025-11-23 17:25:37] 2025-11-23 22:24:44,648 | INFO     | sum of square deviations: 396064800382.9122
[2025-11-23 17:25:37] 2025-11-23 22:24:44,669 | INFO     | sum of deviations: 2026406494666.9016
[2025-11-23 17:25:37] 2025-11-23 22:24:44,669 | INFO     | mean x: 1763902885.6497695
[2025-11-23 17:25:37] 2025-11-23 22:24:44,669 | INFO     | mean y: 2887115.594470046
[2025-11-23 17:25:37] 2025-11-23 22:24:44,669 | INFO     | intersect: -9021858986.524921
[2025-11-23 17:25:37] 2025-11-23 22:24:44,670 | INFO     | chi2: 0.1563249795189762
[2025-11-23 17:25:37] 2025-11-23 22:24:44,670 | INFO     | current memory leak: 5.12 B/s (using 1085 data points, chi2=0.16)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,671 | INFO     | could have reported an average CPU frequency of 2617 MHz (40 samples)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,671 | INFO     | ..............................
[2025-11-23 17:25:37] 2025-11-23 22:24:44,671 | INFO     | . Timing measurements:
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . get job = 0 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . initial setup = 2 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . payload setup = 5 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . stage-in = 0 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . payload execution = 68073 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . stage-out = 3 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | . log creation = 0 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,672 | INFO     | ..............................
[2025-11-23 17:25:37] 2025-11-23 22:24:44,750 | INFO     | 
[2025-11-23 17:25:37] 2025-11-23 22:24:44,750 | INFO     | job summary report
[2025-11-23 17:25:37] 2025-11-23 22:24:44,750 | INFO     | --------------------------------------------------
[2025-11-23 17:25:37] 2025-11-23 22:24:44,750 | INFO     | PanDA job id: 6894281059
[2025-11-23 17:25:37] 2025-11-23 22:24:44,750 | INFO     | task id: 47533967
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | errors: (none)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | pilot state: finished 
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | transexitcode: 0
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | exeerrorcode: 0
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | exeerrordiag: 
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | exitcode: 0
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | exitmsg: OK
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | cpuconsumptiontime: 529197 s
[2025-11-23 17:25:37] 2025-11-23 22:24:44,751 | INFO     | nevents: 1000
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | neventsw: 0
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | pid: 1489
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | pgrp: 1489
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | corecount: 8
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | event service: False
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | sizes: {0: 2298635, 1: 2298834, 4: 2299096, 12: 2299124, 68082: 2354853, 68085: 2363847, 68086: 2364031, 68092: 2364277}
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | --------------------------------------------------
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | 
[2025-11-23 17:25:37] 2025-11-23 22:24:44,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 17:25:37] 2025-11-23 22:24:44,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:25:37] 2025-11-23 22:24:44,776 | INFO     | job 6894281059 has completed (purged errors)
[2025-11-23 17:25:37] 2025-11-23 22:24:44,776 | INFO     | overall cleanup function is called
[2025-11-23 17:25:37] 2025-11-23 22:24:45,789 | INFO     | --- collectZombieJob: --- 10, [1489]
[2025-11-23 17:25:37] 2025-11-23 22:24:45,789 | INFO     | zombie collector waiting for pid 1489
[2025-11-23 17:25:37] 2025-11-23 22:24:45,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:25:37] 2025-11-23 22:24:45,789 | INFO     | collected zombie processes
[2025-11-23 17:25:37] 2025-11-23 22:24:45,789 | INFO     | will attempt to kill all subprocesses of pid=1489
[2025-11-23 17:25:37] 2025-11-23 22:24:45,894 | INFO     | process IDs to be killed: [1489] (in reverse order)
[2025-11-23 17:25:37] 2025-11-23 22:24:45,937 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:25:37] 2025-11-23 22:24:45,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:25:37] 2025-11-23 22:24:45,940 | INFO     | did not find any defunct processes belonging to 1489
[2025-11-23 17:25:37] 2025-11-23 22:24:45,942 | INFO     | did not find any defunct processes belonging to 1489
[2025-11-23 17:25:37] 2025-11-23 22:24:45,943 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:25:37] 2025-11-23 22:24:45,944 | INFO     | ready for new job
[2025-11-23 17:25:37] 2025-11-23 22:24:45,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:25:37] 2025-11-23 22:24:45,948 | INFO     | ***************************************
[2025-11-23 17:25:37] 2025-11-23 22:24:45,948 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:25:37] 2025-11-23 22:24:45,948 | INFO     | ***************************************
[2025-11-23 17:25:37] 2025-11-23 22:24:45,948 | INFO     | 
[2025-11-23 17:25:37] 2025-11-23 22:24:45,949 | INFO     | architecture information:
[2025-11-23 17:25:37] 2025-11-23 22:24:45,950 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:25:37] 2025-11-23 22:24:45,963 | INFO     | cat /etc/os-release:
[2025-11-23 17:25:37] NAME="CentOS Linux"
[2025-11-23 17:25:37] VERSION="7 (Core)"
[2025-11-23 17:25:37] ID="centos"
[2025-11-23 17:25:37] ID_LIKE="rhel fedora"
[2025-11-23 17:25:37] VERSION_ID="7"
[2025-11-23 17:25:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:25:37] ANSI_COLOR="0;31"
[2025-11-23 17:25:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:25:37] HOME_URL="https://www.centos.org/"
[2025-11-23 17:25:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:25:37] 
[2025-11-23 17:25:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:25:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:25:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:25:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:25:37] 
[2025-11-23 17:25:37] 2025-11-23 22:24:45,963 | INFO     | ***************************************
[2025-11-23 17:25:37] 2025-11-23 22:24:46,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 17:25:37] 2025-11-23 22:24:46,477 | INFO     | sufficient remaining disk space (24560795648 B)
[2025-11-23 17:25:37] 2025-11-23 22:24:46,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | INFO     | update_server=False
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:25:37] 2025-11-23 22:24:46,478 | INFO     | aborting loop
[2025-11-23 17:25:37] 2025-11-23 22:24:46,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:25:37] 2025-11-23 22:24:47,030 | INFO     | all payload control threads have been joined
[2025-11-23 17:25:37] 2025-11-23 22:24:47,085 | INFO     | all data control threads have been joined
[2025-11-23 17:25:37] 2025-11-23 22:24:47,483 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:47,484 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:47,484 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:47,526 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:47,607 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:47,825 | INFO     | all job control threads have been joined
[2025-11-23 17:25:37] 2025-11-23 22:24:47,981 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,031 | INFO     | [payload] control thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,091 | INFO     | [data] control thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,453 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,484 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,642 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,830 | INFO     | [job] control thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,896 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:48,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:25:37] 2025-11-23 22:24:48,954 | INFO     | [job] validate thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:52,953 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:24:57,094 | INFO     | job.realtimelogging is not enabled
[2025-11-23 17:25:37] 2025-11-23 22:24:58,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:25:37] 2025-11-23 22:25:16,073 | INFO     | PID=24839 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 17:25:37] 2025-11-23 22:25:16,073 | INFO     | .. there are 3 such processes running
[2025-11-23 17:25:37] 2025-11-23 22:25:16,074 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:25:37] 2025-11-23 22:25:16,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:25:37] 2025-11-23 22:25:16,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:25:37] 2025-11-23 22:25:30,686 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:25:37] 2025-11-23 22:25:32,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161121601344)>', '<ExcThread(monitor, started 140160553449216)>']
[2025-11-23 17:25:37] 2025-11-23 22:25:33,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:25:37] 2025-11-23 22:25:33,144 | INFO     | [monitor] control thread has ended
[2025-11-23 17:25:37] 2025-11-23 22:25:37,224 | INFO     | all workflow threads have been joined
[2025-11-23 17:25:37] 2025-11-23 22:25:37,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:25:37] 2025-11-23 22:25:37,225 | INFO     | traces error code: 0
[2025-11-23 17:25:37] 2025-11-23 22:25:37,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:25:37] 2025-11-23 22:25:37,317 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:25:37] 2025-11-23 22:25:37,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:25:37] 2025-11-23 22:25:37,322 [wrapper] pilotpid: 24839
[2025-11-23 17:25:37] 2025-11-23 22:25:37,324 [wrapper] Pilot exit status: 0
[2025-11-23 17:25:37] 2025-11-23 22:25:37,332 [wrapper] pandaids: 6894281059
[2025-11-23 17:25:37] 2025-11-23 22:25:37,361 [wrapper] cleanup supervisor_pilot 11844 24840
[2025-11-23 17:25:37] 2025-11-23 22:25:37,363 [wrapper] Test setup, not cleaning
[2025-11-23 17:25:37] 2025-11-23 22:25:37,366 [wrapper] apfmon messages muted
[2025-11-23 17:25:37] 2025-11-23 22:25:37,368 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:25:37] 2025-11-23 22:25:37,371 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:25:37]  *** Error codes and diagnostics ***
[2025-11-23 17:25:37]     "exeErrorCode": 0,
[2025-11-23 17:25:37]     "exeErrorDiag": "",
[2025-11-23 17:25:37]     "pilotErrorCode": 0,
[2025-11-23 17:25:37]     "pilotErrorDiag": "",
[2025-11-23 17:25:37]  *** Listing of results directory ***
[2025-11-23 17:25:37] total 1305136
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 03:27 pilot3.tar.gz
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 04:02 queuedata.json
[2025-11-23 17:25:37] -rwx------ 1 boincer umatlas     36292 Nov 21 04:05 runpilot2-wrapper.sh
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas       100 Nov 22 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:25:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 22:29 run_atlas
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas       105 Nov 22 22:29 job.xml
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas 408916510 Nov 22 22:29 EVNT.47493127._002339.pool.root.1
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:29 start_atlas.sh
[2025-11-23 17:25:37] drwxrwx--x 2 boincer umatlas      4096 Nov 22 22:29 shared
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 22:29 input.tar.gz
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas         0 Nov 22 22:29 boinc_lockfile
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 22:29 pandaJob.out
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas        57 Nov 22 22:29 setup.sh.local
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas    989784 Nov 22 22:29 agis_schedconf.cvmfs.json
[2025-11-23 17:25:37] drwx------ 5 boincer umatlas      4096 Nov 22 22:29 pilot3
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas       533 Nov 23 17:13 boinc_task_state.xml
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 17:21 init_data.xml
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas 900245137 Nov 23 17:24 HITS.47533967._003102.pool.root.1
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas      1064 Nov 23 17:24 memory_monitor_summary.json
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas   1526164 Nov 23 17:24 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas   2283984 Nov 23 17:24 log.47533967._003102.job.log.tgz.1
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas      8665 Nov 23 17:24 heartbeat.json
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas        95 Nov 23 17:25 pilot_heartbeat.json
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:25 wrapper_checkpoint.txt
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:25 boinc_mmap_file
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas      4893 Nov 23 17:25 pilotlog.txt
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas   9398764 Nov 23 17:25 log.47533967._003102.job.log.1
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas       353 Nov 23 17:25 output.list
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:25 runtime_log
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas  11704320 Nov 23 17:25 result.tar.gz
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas       668 Nov 23 17:25 Ye1LDm2Fcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8THKDmvbG5Po.diag
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 17:25 runtime_log.err
[2025-11-23 17:25:37] -rw-r--r-- 1 boincer umatlas     21278 Nov 23 17:25 stderr.txt
[2025-11-23 17:25:37] HITS file was successfully produced:
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas 900245137 Nov 23 17:24 shared/HITS.pool.root.1
[2025-11-23 17:25:37]  *** Contents of shared directory: ***
[2025-11-23 17:25:37] total 1290520
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas 408916510 Nov 22 22:29 ATLAS.root_0
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:29 start_atlas.sh
[2025-11-23 17:25:37] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 22:29 input.tar.gz
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas 900245137 Nov 23 17:24 HITS.pool.root.1
[2025-11-23 17:25:37] -rw------- 1 boincer umatlas  11704320 Nov 23 17:25 result.tar.gz
17:25:39 (20890): run_atlas exited; CPU time 528291.058833
17:25:39 (20890): called boinc_finish(0)

</stderr_txt>
]]>

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