Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:57:22 (3184398): wrapper (7.7.26015): starting
14:57:22 (3184398): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 14:57:22] Arguments: --nthreads 12
[2025-11-23 14:57:22] Threads: 12
[2025-11-23 14:57:22] Checking for CVMFS
[2025-11-23 14:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:57:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:57:23] 2.13.3.0 9060 22116 390380 153210 3 81 24710427 46080000 7301 130560 0 125855949 99.872 44936519 26071 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-23 14:57:23] CVMFS is ok
[2025-11-23 14:57:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:57:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:57:23] Further information can be found at the LHC@home message board.
[2025-11-23 14:57:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:57:23] Checking for apptainer binary...
[2025-11-23 14:57:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 14:57:23] Running /usr/bin/apptainer --version
[2025-11-23 14:57:23] apptainer version 1.4.3-1.el9
[2025-11-23 14:57:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:57:23] mff2104.farm.particle.cz
[2025-11-23 14:57:23] apptainer works
[2025-11-23 14:57:23] Set ATHENA_PROC_NUMBER=12
[2025-11-23 14:57:23] Set ATHENA_CORE_NUMBER=12
[2025-11-23 14:57:23] Starting ATLAS job with PandaID=6893847982
[2025-11-23 14:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 20:38:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 20:38:15] 2025-11-23 19:37:20,481 | INFO     | monitor loop #1407: job 0:6893847982 is in state 'finished'
[2025-11-23 20:38:15] 2025-11-23 19:37:20,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 20:38:15] 2025-11-23 19:37:21,425 | INFO     | time since job start (20386s) is within the limit (172800.0s)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,404 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 20:38:15] 2025-11-23 19:37:22,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2738.9600520833333
[2025-11-23 20:38:15] 2025-11-23 19:37:22,438 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6893847982/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,438 | INFO     | extracted standard info from prmon json
[2025-11-23 20:38:15] 2025-11-23 19:37:22,438 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 20:38:15] 2025-11-23 19:37:22,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 20:38:15] 2025-11-23 19:37:22,444 | INFO     | fitting pss+swap vs Time
[2025-11-23 20:38:15] 2025-11-23 19:37:22,445 | INFO     | sum of square deviations: 11553382109.353277
[2025-11-23 20:38:15] 2025-11-23 19:37:22,448 | INFO     | sum of deviations: 217214005488.85638
[2025-11-23 20:38:15] 2025-11-23 19:37:22,448 | INFO     | mean x: 1763916442.4790418
[2025-11-23 20:38:15] 2025-11-23 19:37:22,448 | INFO     | mean y: 3446891.5508982036
[2025-11-23 20:38:15] 2025-11-23 19:37:22,448 | INFO     | intersect: -33159773383.864544
[2025-11-23 20:38:15] 2025-11-23 19:37:22,449 | INFO     | chi2: 5.589207220445115
[2025-11-23 20:38:15] 2025-11-23 19:37:22,449 | INFO     | sum of square deviations: 11042337371.987843
[2025-11-23 20:38:15] 2025-11-23 19:37:22,452 | INFO     | sum of deviations: 350523588168.24036
[2025-11-23 20:38:15] 2025-11-23 19:37:22,452 | INFO     | mean x: 1763916289.993921
[2025-11-23 20:38:15] 2025-11-23 19:37:22,452 | INFO     | mean y: 3486610.6200607903
[2025-11-23 20:38:15] 2025-11-23 19:37:22,452 | INFO     | intersect: -55989574130.8101
[2025-11-23 20:38:15] 2025-11-23 19:37:22,453 | INFO     | chi2: 2.296142077468674
[2025-11-23 20:38:15] 2025-11-23 19:37:22,453 | INFO     | current chi2=2.296142077468674 (change=58.91828685346518 %)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,453 | INFO     | sum of square deviations: 10546535409.0
[2025-11-23 20:38:15] 2025-11-23 19:37:22,456 | INFO     | sum of deviations: 370680184853.49994
[2025-11-23 20:38:15] 2025-11-23 19:37:22,456 | INFO     | mean x: 1763916137.5
[2025-11-23 20:38:15] 2025-11-23 19:37:22,456 | INFO     | mean y: 3492752.6450617285
[2025-11-23 20:38:15] 2025-11-23 19:37:22,456 | INFO     | intersect: -61993052516.29726
[2025-11-23 20:38:15] 2025-11-23 19:37:22,457 | INFO     | chi2: 2.0584964398045713
[2025-11-23 20:38:15] 2025-11-23 19:37:22,457 | INFO     | current chi2=2.0584964398045713 (change=10.349779310089085 %)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,457 | INFO     | right removable region: 323
[2025-11-23 20:38:15] 2025-11-23 19:37:22,457 | INFO     | sum of square deviations: 11042178285.951427
[2025-11-23 20:38:15] 2025-11-23 19:37:22,460 | INFO     | sum of deviations: 118590638007.53168
[2025-11-23 20:38:15] 2025-11-23 19:37:22,460 | INFO     | mean x: 1763916594.9878418
[2025-11-23 20:38:15] 2025-11-23 19:37:22,460 | INFO     | mean y: 3476178.3829787234
[2025-11-23 20:38:15] 2025-11-23 19:37:22,461 | INFO     | intersect: -18940611570.84476
[2025-11-23 20:38:15] 2025-11-23 19:37:22,461 | INFO     | chi2: 3.6365551229753796
[2025-11-23 20:38:15] 2025-11-23 19:37:22,461 | INFO     | current chi2=3.6365551229753796 (change=34.936119210735384 %)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,462 | INFO     | sum of square deviations: 10546357962.922789
[2025-11-23 20:38:15] 2025-11-23 19:37:22,464 | INFO     | sum of deviations: 98735809092.65436
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | mean x: 1763916747.4845679
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | mean y: 3482272.5308641978
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | intersect: -16510441097.722858
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | chi2: 3.6111883364330604
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | current chi2=3.6111883364330604 (change=0.6975498977605079 %)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,465 | INFO     | left removable region: 20
[2025-11-23 20:38:15] 2025-11-23 19:37:22,466 | INFO     | sum of square deviations: 8625813703.986795
[2025-11-23 20:38:15] 2025-11-23 19:37:22,468 | INFO     | sum of deviations: 223832606972.35992
[2025-11-23 20:38:15] 2025-11-23 19:37:22,469 | INFO     | mean x: 1763916717.0066006
[2025-11-23 20:38:15] 2025-11-23 19:37:22,469 | INFO     | mean y: 3538728.3201320134
[2025-11-23 20:38:15] 2025-11-23 19:37:22,469 | INFO     | intersect: -45768615737.20347
[2025-11-23 20:38:15] 2025-11-23 19:37:22,469 | INFO     | chi2: 0.027567309378764962
[2025-11-23 20:38:15] 2025-11-23 19:37:22,469 | INFO     | current memory leak: 25.95 B/s (using 303 data points, chi2=0.03)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | could have reported an average CPU frequency of 2728 MHz (15 samples)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | ..............................
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | . Timing measurements:
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | . get job = 0 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | . initial setup = 1 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,470 | INFO     | . payload setup = 7 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,471 | INFO     | . stage-in = 0 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,471 | INFO     | . payload execution = 20348 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,471 | INFO     | . stage-out = 2 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,471 | INFO     | . log creation = 0 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,471 | INFO     | ..............................
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | 
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | job summary report
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | --------------------------------------------------
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | PanDA job id: 6893847982
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | task id: 47523449
[2025-11-23 20:38:15] 2025-11-23 19:37:22,731 | INFO     | errors: (none)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | pilot state: finished 
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | transexitcode: 0
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | exeerrorcode: 0
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | exeerrordiag: 
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | exitcode: 0
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | exitmsg: OK
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | cpuconsumptiontime: 232884 s
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | nevents: 1000
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | neventsw: 0
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | pid: 3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:22,732 | INFO     | pgrp: 3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | corecount: 12
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | event service: False
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | sizes: {0: 2298808, 6: 2299070, 11: 2299098, 20359: 2333747, 20362: 2342743, 20365: 2342799, 20371: 2343173}
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | --------------------------------------------------
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | 
[2025-11-23 20:38:15] 2025-11-23 19:37:22,733 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-11-23 20:38:15] 2025-11-23 19:37:22,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | job 6893847982 has completed (purged errors)
[2025-11-23 20:38:15] 2025-11-23 19:37:22,759 | INFO     | overall cleanup function is called
[2025-11-23 20:38:15] 2025-11-23 19:37:23,782 | INFO     | --- collectZombieJob: --- 10, [3195538]
[2025-11-23 20:38:15] 2025-11-23 19:37:23,782 | INFO     | zombie collector waiting for pid 3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:23,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 20:38:15] 2025-11-23 19:37:23,782 | INFO     | collected zombie processes
[2025-11-23 20:38:15] 2025-11-23 19:37:23,783 | INFO     | will attempt to kill all subprocesses of pid=3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:24,152 | INFO     | process IDs to be killed: [3195538] (in reverse order)
[2025-11-23 20:38:15] 2025-11-23 19:37:24,279 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 20:38:15] 2025-11-23 19:37:24,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 20:38:15] 2025-11-23 19:37:24,293 | INFO     | did not find any defunct processes belonging to 3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:24,308 | INFO     | did not find any defunct processes belonging to 3195538
[2025-11-23 20:38:15] 2025-11-23 19:37:24,309 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 20:38:15] 2025-11-23 19:37:24,310 | INFO     | ready for new job
[2025-11-23 20:38:15] 2025-11-23 19:37:24,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 20:38:15] 2025-11-23 19:37:24,313 | INFO     | ***************************************
[2025-11-23 20:38:15] 2025-11-23 19:37:24,313 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 20:38:15] 2025-11-23 19:37:24,313 | INFO     | ***************************************
[2025-11-23 20:38:15] 2025-11-23 19:37:24,313 | INFO     | 
[2025-11-23 20:38:15] 2025-11-23 19:37:24,319 | INFO     | architecture information:
[2025-11-23 20:38:15] 2025-11-23 19:37:24,320 | INFO     | executing command: cat /etc/os-release
[2025-11-23 20:38:15] 2025-11-23 19:37:24,342 | INFO     | cat /etc/os-release:
[2025-11-23 20:38:15] NAME="CentOS Linux"
[2025-11-23 20:38:15] VERSION="7 (Core)"
[2025-11-23 20:38:15] ID="centos"
[2025-11-23 20:38:15] ID_LIKE="rhel fedora"
[2025-11-23 20:38:15] VERSION_ID="7"
[2025-11-23 20:38:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 20:38:15] ANSI_COLOR="0;31"
[2025-11-23 20:38:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 20:38:15] HOME_URL="https://www.centos.org/"
[2025-11-23 20:38:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 20:38:15] 
[2025-11-23 20:38:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 20:38:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 20:38:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 20:38:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 20:38:15] 
[2025-11-23 20:38:15] 2025-11-23 19:37:24,343 | INFO     | ***************************************
[2025-11-23 20:38:15] 2025-11-23 19:37:24,846 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-11-23 20:38:15] 2025-11-23 19:37:24,867 | INFO     | sufficient remaining disk space (1672921219072 B)
[2025-11-23 20:38:15] 2025-11-23 19:37:24,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 20:38:15] 2025-11-23 19:37:24,868 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 20:38:15] 2025-11-23 19:37:24,868 | INFO     | update_server=False
[2025-11-23 20:38:15] 2025-11-23 19:37:24,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 20:38:15] 2025-11-23 19:37:24,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 20:38:15] 2025-11-23 19:37:24,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:38:15] 2025-11-23 19:37:24,869 | INFO     | aborting loop
[2025-11-23 20:38:15] 2025-11-23 19:37:25,430 | INFO     | all job control threads have been joined
[2025-11-23 20:38:15] 2025-11-23 19:37:25,873 | INFO     | [job] retrieve thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:25,874 | INFO     | [job] job monitor thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:25,874 | INFO     | all data control threads have been joined
[2025-11-23 20:38:15] 2025-11-23 19:37:25,896 | INFO     | [payload] failed_post thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:25,943 | INFO     | all payload control threads have been joined
[2025-11-23 20:38:15] 2025-11-23 19:37:25,995 | INFO     | [job] validate thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:25,996 | INFO     | [payload] validate_post thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:26,434 | INFO     | [job] control thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:26,492 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:26,872 | INFO     | [data] copytool_out thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:26,879 | INFO     | [data] control thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:26,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 20:38:15] 2025-11-23 19:37:26,948 | INFO     | [payload] control thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:27,179 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:27,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:27,209 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:27,264 | INFO     | [data] copytool_in thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:27,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 20:38:15] 2025-11-23 19:37:28,576 | INFO     | [job] queue monitor thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:30,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 20:38:15] 2025-11-23 19:37:54,960 | INFO     | PID=3188469 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 20:38:15] 2025-11-23 19:37:54,960 | INFO     | .. there are 8 such processes running
[2025-11-23 20:38:15] 2025-11-23 19:37:54,961 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 20:38:15] 2025-11-23 19:37:54,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 20:38:15] 2025-11-23 19:37:54,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 20:38:15] 2025-11-23 19:38:08,777 | INFO     | [monitor] cgroup control has ended
[2025-11-23 20:38:15] 2025-11-23 19:38:10,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773220828992)>', '<ExcThread(monitor, started 139772563535616)>']
[2025-11-23 20:38:15] 2025-11-23 19:38:11,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 20:38:15] 2025-11-23 19:38:11,039 | INFO     | [monitor] control thread has ended
[2025-11-23 20:38:15] 2025-11-23 19:38:15,375 | INFO     | all workflow threads have been joined
[2025-11-23 20:38:15] 2025-11-23 19:38:15,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 20:38:15] 2025-11-23 19:38:15,376 | INFO     | traces error code: 0
[2025-11-23 20:38:15] 2025-11-23 19:38:15,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 20:38:15] 2025-11-23 19:38:15,493 [wrapper] ==== pilot stdout END ====
[2025-11-23 20:38:15] 2025-11-23 19:38:15,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 20:38:15] 2025-11-23 19:38:15,499 [wrapper] pilotpid: 3188469
[2025-11-23 20:38:15] 2025-11-23 19:38:15,502 [wrapper] Pilot exit status: 0
[2025-11-23 20:38:15] 2025-11-23 19:38:15,516 [wrapper] pandaids: 6893847982
[2025-11-23 20:38:15] 2025-11-23 19:38:15,600 [wrapper] cleanup supervisor_pilot 3678601 3188470
[2025-11-23 20:38:15] 2025-11-23 19:38:15,604 [wrapper] Test setup, not cleaning
[2025-11-23 20:38:15] 2025-11-23 19:38:15,607 [wrapper] apfmon messages muted
[2025-11-23 20:38:15] 2025-11-23 19:38:15,611 [wrapper] ==== wrapper stdout END ====
[2025-11-23 20:38:15] 2025-11-23 19:38:15,614 [wrapper] ==== wrapper stderr END ====
[2025-11-23 20:38:15]  *** Error codes and diagnostics ***
[2025-11-23 20:38:15]     "exeErrorCode": 0,
[2025-11-23 20:38:15]     "exeErrorDiag": "",
[2025-11-23 20:38:15]     "pilotErrorCode": 0,
[2025-11-23 20:38:15]     "pilotErrorDiag": "",
[2025-11-23 20:38:15]  *** Listing of results directory ***
[2025-11-23 20:38:15] total 1321192
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-23 20:38:15] -rwx------ 1 boinc boinc     36292 Nov 20 11:27 runpilot2-wrapper.sh
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:27 queuedata.json
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 20:38:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:57 run_atlas
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:57 job.xml
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc      6665 Nov 23 14:57 init_data.xml
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc 412346982 Nov 23 14:57 EVNT.47493127._000250.pool.root.1
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:57 start_atlas.sh
[2025-11-23 20:38:15] drwxrwx--x 2 boinc boinc      4096 Nov 23 14:57 shared
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc    590102 Nov 23 14:57 input.tar.gz
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:57 boinc_lockfile
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc      2786 Nov 23 14:57 pandaJob.out
[2025-11-23 20:38:15] -rw------- 1 boinc boinc    989785 Nov 23 14:57 agis_schedconf.cvmfs.json
[2025-11-23 20:38:15] drwx------ 5 boinc boinc      4096 Nov 23 14:57 pilot3
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc       533 Nov 23 20:28 boinc_task_state.xml
[2025-11-23 20:38:15] -rw------- 1 boinc boinc 926784842 Nov 23 20:36 HITS.47523449._002496.pool.root.1
[2025-11-23 20:38:15] -rw------- 1 boinc boinc      1034 Nov 23 20:37 memory_monitor_summary.json
[2025-11-23 20:38:15] -rw------- 1 boinc boinc   1526164 Nov 23 20:37 agis_ddmendpoints.agis.ALL.json
[2025-11-23 20:38:15] -rw------- 1 boinc boinc   2080119 Nov 23 20:37 log.47523449._002496.job.log.tgz.1
[2025-11-23 20:38:15] -rw------- 1 boinc boinc      8600 Nov 23 20:37 heartbeat.json
[2025-11-23 20:38:15] -rw------- 1 boinc boinc        95 Nov 23 20:37 pilot_heartbeat.json
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc      8192 Nov 23 20:38 boinc_mmap_file
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc        29 Nov 23 20:38 wrapper_checkpoint.txt
[2025-11-23 20:38:15] -rw------- 1 boinc boinc      4826 Nov 23 20:38 pilotlog.txt
[2025-11-23 20:38:15] -rw------- 1 boinc boinc   2842476 Nov 23 20:38 log.47523449._002496.job.log.1
[2025-11-23 20:38:15] -rw------- 1 boinc boinc       353 Nov 23 20:38 output.list
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc       620 Nov 23 20:38 runtime_log
[2025-11-23 20:38:15] -rw------- 1 boinc boinc   4945920 Nov 23 20:38 result.tar.gz
[2025-11-23 20:38:15] -rw------- 1 boinc boinc       671 Nov 23 20:38 zhKKDmp3Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQTHKDmgsk1Vo.diag
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc      8881 Nov 23 20:38 runtime_log.err
[2025-11-23 20:38:15] -rw-r--r-- 1 boinc boinc     21350 Nov 23 20:38 stderr.txt
[2025-11-23 20:38:15] HITS file was successfully produced:
[2025-11-23 20:38:15] -rw------- 1 boinc boinc 926784842 Nov 23 20:36 shared/HITS.pool.root.1
[2025-11-23 20:38:15]  *** Contents of shared directory: ***
[2025-11-23 20:38:15] total 1313184
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc 412346982 Nov 23 14:57 ATLAS.root_0
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:57 start_atlas.sh
[2025-11-23 20:38:15] -rw-r--r-- 2 boinc boinc    590102 Nov 23 14:57 input.tar.gz
[2025-11-23 20:38:15] -rw------- 1 boinc boinc 926784842 Nov 23 20:36 HITS.pool.root.1
[2025-11-23 20:38:15] -rw------- 1 boinc boinc   4945920 Nov 23 20:38 result.tar.gz
20:38:17 (3184398): run_atlas exited; CPU time 232883.887186
20:38:17 (3184398): called boinc_finish(0)

</stderr_txt>
]]>

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