Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:29 (18700): wrapper (7.7.26015): starting
22:04:29 (18700): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:04:29] Arguments: --nthreads 8
[2025-11-22 22:04:29] Threads: 8
[2025-11-22 22:04:29] Checking for CVMFS
[2025-11-22 22:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:04:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:04:29] 2.11.2.0 2918 137602 91448 153193 2 81 11990433 20275200 1 130560 0 51593404 99.933 6308340 35008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 22:04:29] CVMFS is ok
[2025-11-22 22:04:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:04:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:04:29] Further information can be found at the LHC@home message board.
[2025-11-22 22:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:04:29] Checking for apptainer binary...
[2025-11-22 22:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:04:29] Running /usr/bin/apptainer --version
[2025-11-22 22:04:29] apptainer version 1.3.2-1.el7
[2025-11-22 22:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:04:30] c-115-8.aglt2.org
[2025-11-22 22:04:30] apptainer works
[2025-11-22 22:04:31] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:04:31] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:04:31] Starting ATLAS job with PandaID=6895335190
[2025-11-22 22:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:18:00]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:18:00] 2025-11-23 14:17:03,782 | INFO     | monitor loop #2976: job 0:6895335190 is in state 'finished'
[2025-11-23 09:18:00] 2025-11-23 14:17:03,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,210 | INFO     | time since job start (40336s) is within the limit (172800.0s)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,522 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 09:18:00] 2025-11-23 14:17:04,527 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-23 09:18:00] 2025-11-23 14:17:04,530 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895335190/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,531 | INFO     | extracted standard info from prmon json
[2025-11-23 09:18:00] 2025-11-23 14:17:04,531 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:18:00] 2025-11-23 14:17:04,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:18:00] 2025-11-23 14:17:04,543 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:18:00] 2025-11-23 14:17:04,544 | INFO     | sum of square deviations: 89553412200.75955
[2025-11-23 09:18:00] 2025-11-23 14:17:04,552 | INFO     | sum of deviations: 753895765930.5492
[2025-11-23 09:18:00] 2025-11-23 14:17:04,552 | INFO     | mean x: 1763887249.5990922
[2025-11-23 09:18:00] 2025-11-23 14:17:04,553 | INFO     | mean y: 3168390.2511346443
[2025-11-23 09:18:00] 2025-11-23 14:17:04,553 | INFO     | intersect: -14845926651.158787
[2025-11-23 09:18:00] 2025-11-23 14:17:04,554 | INFO     | chi2: 5.5676226663062245
[2025-11-23 09:18:00] 2025-11-23 14:17:04,554 | INFO     | sum of square deviations: 87536639348.9514
[2025-11-23 09:18:00] 2025-11-23 14:17:04,564 | INFO     | sum of deviations: 977774152094.6844
[2025-11-23 09:18:00] 2025-11-23 14:17:04,564 | INFO     | mean x: 1763887097.1036584
[2025-11-23 09:18:00] 2025-11-23 14:17:04,564 | INFO     | mean y: 3185306.798780488
[2025-11-23 09:18:00] 2025-11-23 14:17:04,564 | INFO     | intersect: -19699229860.021805
[2025-11-23 09:18:00] 2025-11-23 14:17:04,565 | INFO     | chi2: 2.758309550752218
[2025-11-23 09:18:00] 2025-11-23 14:17:04,565 | INFO     | current chi2=2.758309550752218 (change=50.458037189826534 %)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,566 | INFO     | sum of square deviations: 85550298787.54141
[2025-11-23 09:18:00] 2025-11-23 14:17:04,574 | INFO     | sum of deviations: 998149100963.2825
[2025-11-23 09:18:00] 2025-11-23 14:17:04,574 | INFO     | mean x: 1763886944.6052227
[2025-11-23 09:18:00] 2025-11-23 14:17:04,574 | INFO     | mean y: 3186857.7403993853
[2025-11-23 09:18:00] 2025-11-23 14:17:04,575 | INFO     | intersect: -20576778296.220837
[2025-11-23 09:18:00] 2025-11-23 14:17:04,576 | INFO     | chi2: 2.5965459692540214
[2025-11-23 09:18:00] 2025-11-23 14:17:04,576 | INFO     | current chi2=2.5965459692540214 (change=5.864591283965293 %)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,576 | INFO     | right removable region: 650
[2025-11-23 09:18:00] 2025-11-23 14:17:04,577 | INFO     | sum of square deviations: 87536397788.95131
[2025-11-23 09:18:00] 2025-11-23 14:17:04,585 | INFO     | sum of deviations: 551163328031.2382
[2025-11-23 09:18:00] 2025-11-23 14:17:04,585 | INFO     | mean x: 1763887402.1036584
[2025-11-23 09:18:00] 2025-11-23 14:17:04,586 | INFO     | mean y: 3183688.775914634
[2025-11-23 09:18:00] 2025-11-23 14:17:04,586 | INFO     | intersect: -11102939882.355719
[2025-11-23 09:18:00] 2025-11-23 14:17:04,586 | INFO     | chi2: 3.192417954068822
[2025-11-23 09:18:00] 2025-11-23 14:17:04,587 | INFO     | current chi2=3.192417954068822 (change=42.661021671089735 %)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,588 | INFO     | sum of square deviations: 85550015381.75108
[2025-11-23 09:18:00] 2025-11-23 14:17:04,597 | INFO     | sum of deviations: 499439201766.85626
[2025-11-23 09:18:00] 2025-11-23 14:17:04,597 | INFO     | mean x: 1763887554.6036866
[2025-11-23 09:18:00] 2025-11-23 14:17:04,597 | INFO     | mean y: 3187659.1428571427
[2025-11-23 09:18:00] 2025-11-23 14:17:04,598 | INFO     | intersect: -10294351018.631317
[2025-11-23 09:18:00] 2025-11-23 14:17:04,598 | INFO     | chi2: 3.117998731545142
[2025-11-23 09:18:00] 2025-11-23 14:17:04,598 | INFO     | current chi2=3.117998731545142 (change=2.3311240443573773 %)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,598 | INFO     | left removable region: 20
[2025-11-23 09:18:00] 2025-11-23 14:17:04,599 | INFO     | sum of square deviations: 77535338744.22224
[2025-11-23 09:18:00] 2025-11-23 14:17:04,607 | INFO     | sum of deviations: 671003348097.5553
[2025-11-23 09:18:00] 2025-11-23 14:17:04,608 | INFO     | mean x: 1763887524.1111112
[2025-11-23 09:18:00] 2025-11-23 14:17:04,608 | INFO     | mean y: 3212222.7206349205
[2025-11-23 09:18:00] 2025-11-23 14:17:04,608 | INFO     | intersect: -15261755384.508142
[2025-11-23 09:18:00] 2025-11-23 14:17:04,609 | INFO     | chi2: 0.08016592587906528
[2025-11-23 09:18:00] 2025-11-23 14:17:04,609 | INFO     | current memory leak: 8.65 B/s (using 630 data points, chi2=0.08)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,609 | INFO     | could have reported an average CPU frequency of 2378 MHz (26 samples)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,609 | INFO     | ..............................
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . Timing measurements:
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . get job = 0 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . initial setup = 2 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . payload setup = 8 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . stage-in = 0 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . payload execution = 40296 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . stage-out = 3 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | . log creation = 0 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,610 | INFO     | ..............................
[2025-11-23 09:18:00] 2025-11-23 14:17:04,863 | INFO     | 
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | job summary report
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | --------------------------------------------------
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | PanDA job id: 6895335190
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | task id: 47556137
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | errors: (none)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | pilot state: finished 
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | transexitcode: 0
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | exeerrorcode: 0
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | exeerrordiag: 
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | exitcode: 0
[2025-11-23 09:18:00] 2025-11-23 14:17:04,865 | INFO     | exitmsg: OK
[2025-11-23 09:18:00] 2025-11-23 14:17:04,866 | INFO     | cpuconsumptiontime: 313824 s
[2025-11-23 09:18:00] 2025-11-23 14:17:04,866 | INFO     | nevents: 1000
[2025-11-23 09:18:00] 2025-11-23 14:17:04,866 | INFO     | neventsw: 0
[2025-11-23 09:18:00] 2025-11-23 14:17:04,866 | INFO     | pid: 29968
[2025-11-23 09:18:00] 2025-11-23 14:17:04,866 | INFO     | pgrp: 29968
[2025-11-23 09:18:00] 2025-11-23 14:17:04,867 | INFO     | corecount: 8
[2025-11-23 09:18:00] 2025-11-23 14:17:04,867 | INFO     | event service: False
[2025-11-23 09:18:00] 2025-11-23 14:17:04,867 | INFO     | sizes: {0: 2298629, 1: 2298828, 6: 2299090, 11: 2299118, 40308: 2342848, 40313: 2352026, 40320: 2352216}
[2025-11-23 09:18:00] 2025-11-23 14:17:04,867 | INFO     | --------------------------------------------------
[2025-11-23 09:18:00] 2025-11-23 14:17:04,867 | INFO     | 
[2025-11-23 09:18:00] 2025-11-23 14:17:04,868 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 09:18:00] 2025-11-23 14:17:04,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:18:00] 2025-11-23 14:17:04,900 | INFO     | job 6895335190 has completed (purged errors)
[2025-11-23 09:18:00] 2025-11-23 14:17:04,900 | INFO     | overall cleanup function is called
[2025-11-23 09:18:00] 2025-11-23 14:17:05,327 | INFO     | PID=22379 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 09:18:00] 2025-11-23 14:17:05,915 | INFO     | --- collectZombieJob: --- 10, [29968]
[2025-11-23 09:18:00] 2025-11-23 14:17:05,916 | INFO     | zombie collector waiting for pid 29968
[2025-11-23 09:18:00] 2025-11-23 14:17:05,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:18:00] 2025-11-23 14:17:05,916 | INFO     | collected zombie processes
[2025-11-23 09:18:00] 2025-11-23 14:17:05,916 | INFO     | will attempt to kill all subprocesses of pid=29968
[2025-11-23 09:18:00] 2025-11-23 14:17:05,996 | INFO     | process IDs to be killed: [29968] (in reverse order)
[2025-11-23 09:18:00] 2025-11-23 14:17:06,055 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:18:00] 2025-11-23 14:17:06,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:18:00] 2025-11-23 14:17:06,060 | INFO     | did not find any defunct processes belonging to 29968
[2025-11-23 09:18:00] 2025-11-23 14:17:06,063 | INFO     | did not find any defunct processes belonging to 29968
[2025-11-23 09:18:00] 2025-11-23 14:17:06,066 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:18:00] 2025-11-23 14:17:06,066 | INFO     | ready for new job
[2025-11-23 09:18:00] 2025-11-23 14:17:06,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:18:00] 2025-11-23 14:17:06,069 | INFO     | ***************************************
[2025-11-23 09:18:00] 2025-11-23 14:17:06,069 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:18:00] 2025-11-23 14:17:06,069 | INFO     | ***************************************
[2025-11-23 09:18:00] 2025-11-23 14:17:06,069 | INFO     | 
[2025-11-23 09:18:00] 2025-11-23 14:17:06,070 | INFO     | architecture information:
[2025-11-23 09:18:00] 2025-11-23 14:17:06,070 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:18:00] 2025-11-23 14:17:06,088 | INFO     | cat /etc/os-release:
[2025-11-23 09:18:00] NAME="CentOS Linux"
[2025-11-23 09:18:00] VERSION="7 (Core)"
[2025-11-23 09:18:00] ID="centos"
[2025-11-23 09:18:00] ID_LIKE="rhel fedora"
[2025-11-23 09:18:00] VERSION_ID="7"
[2025-11-23 09:18:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:18:00] ANSI_COLOR="0;31"
[2025-11-23 09:18:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:18:00] HOME_URL="https://www.centos.org/"
[2025-11-23 09:18:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:18:00] 
[2025-11-23 09:18:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:18:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:18:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:18:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:18:00] 
[2025-11-23 09:18:00] 2025-11-23 14:17:06,089 | INFO     | ***************************************
[2025-11-23 09:18:00] 2025-11-23 14:17:06,592 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 09:18:00] 2025-11-23 14:17:06,614 | INFO     | sufficient remaining disk space (17469276160 B)
[2025-11-23 09:18:00] 2025-11-23 14:17:06,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:18:00] 2025-11-23 14:17:06,615 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:18:00] 2025-11-23 14:17:06,615 | INFO     | update_server=False
[2025-11-23 09:18:00] 2025-11-23 14:17:06,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:18:00] 2025-11-23 14:17:06,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:18:00] 2025-11-23 14:17:06,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:18:00] 2025-11-23 14:17:06,891 | INFO     | all job control threads have been joined
[2025-11-23 09:18:00] 2025-11-23 14:17:06,978 | INFO     | all data control threads have been joined
[2025-11-23 09:18:00] 2025-11-23 14:17:07,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:18:00] 2025-11-23 14:17:07,291 | INFO     | aborting loop
[2025-11-23 09:18:00] 2025-11-23 14:17:07,621 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:07,622 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:07,896 | INFO     | [job] control thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:07,983 | INFO     | [data] control thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:07,994 | INFO     | all payload control threads have been joined
[2025-11-23 09:18:00] 2025-11-23 14:17:08,297 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,389 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,560 | INFO     | [job] validate thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,600 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,622 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:18:00] 2025-11-23 14:17:08,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,855 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,936 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:08,999 | INFO     | [payload] control thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:09,109 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:09,117 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:12,651 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:18:00] 2025-11-23 14:17:37,536 | INFO     | PID=22379 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 09:18:00] 2025-11-23 14:17:37,537 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:18:00] 2025-11-23 14:17:37,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:18:00] 2025-11-23 14:17:37,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:18:00] 2025-11-23 14:17:54,492 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:18:00] 2025-11-23 14:17:54,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215605688128)>', '<ExcThread(monitor, started 140214492190464)>']
[2025-11-23 09:18:00] 2025-11-23 14:17:55,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:18:00] 2025-11-23 14:17:55,629 | INFO     | [monitor] control thread has ended
[2025-11-23 09:18:00] 2025-11-23 14:18:00,009 | INFO     | all workflow threads have been joined
[2025-11-23 09:18:00] 2025-11-23 14:18:00,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:18:00] 2025-11-23 14:18:00,012 | INFO     | traces error code: 0
[2025-11-23 09:18:00] 2025-11-23 14:18:00,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:18:00] 2025-11-23 14:18:00,117 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:18:00] 2025-11-23 14:18:00,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:18:00] 2025-11-23 14:18:00,127 [wrapper] pilotpid: 22379
[2025-11-23 09:18:00] 2025-11-23 14:18:00,131 [wrapper] Pilot exit status: 0
[2025-11-23 09:18:00] 2025-11-23 14:18:00,148 [wrapper] pandaids: 6895335190
[2025-11-23 09:18:00] 2025-11-23 14:18:00,200 [wrapper] cleanup supervisor_pilot 32314 22380
[2025-11-23 09:18:00] 2025-11-23 14:18:00,205 [wrapper] Test setup, not cleaning
[2025-11-23 09:18:00] 2025-11-23 14:18:00,210 [wrapper] apfmon messages muted
[2025-11-23 09:18:00] 2025-11-23 14:18:00,215 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:18:00] 2025-11-23 14:18:00,219 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:18:00]  *** Error codes and diagnostics ***
[2025-11-23 09:18:00]     "exeErrorCode": 0,
[2025-11-23 09:18:00]     "exeErrorDiag": "",
[2025-11-23 09:18:00]     "pilotErrorCode": 0,
[2025-11-23 09:18:00]     "pilotErrorDiag": "",
[2025-11-23 09:18:00]  *** Listing of results directory ***
[2025-11-23 09:18:00] total 1317168
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 23:34 queuedata.json
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 23:34 pilot3.tar.gz
[2025-11-23 09:18:00] -rwx------ 1 boincer umatlas     36292 Nov 21 23:35 runpilot2-wrapper.sh
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas       100 Nov 22 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:18:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 22:04 run_atlas
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas       105 Nov 22 22:04 job.xml
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas 411104548 Nov 22 22:04 EVNT.47483658._000253.pool.root.1
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:04 start_atlas.sh
[2025-11-23 09:18:00] drwxrwx--x 2 boincer umatlas      4096 Nov 22 22:04 shared
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 22:04 input.tar.gz
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas         0 Nov 22 22:04 boinc_lockfile
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas      2782 Nov 22 22:04 pandaJob.out
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas        57 Nov 22 22:04 setup.sh.local
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas    989784 Nov 22 22:04 agis_schedconf.cvmfs.json
[2025-11-23 09:18:00] drwx------ 5 boincer umatlas      4096 Nov 22 22:04 pilot3
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas       532 Nov 23 09:09 boinc_task_state.xml
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 09:10 init_data.xml
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas 918733917 Nov 23 09:16 HITS.47556137._002491.pool.root.1
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas      1064 Nov 23 09:16 memory_monitor_summary.json
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas   1526164 Nov 23 09:16 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas   1918591 Nov 23 09:16 log.47556137._002491.job.log.tgz.1
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas      8651 Nov 23 09:17 heartbeat.json
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas        95 Nov 23 09:17 pilot_heartbeat.json
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas        29 Nov 23 09:17 wrapper_checkpoint.txt
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 09:17 boinc_mmap_file
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas      4746 Nov 23 09:18 pilotlog.txt
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas   5585464 Nov 23 09:18 log.47556137._002491.job.log.1
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas       353 Nov 23 09:18 output.list
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas       620 Nov 23 09:18 runtime_log
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas   7526400 Nov 23 09:18 result.tar.gz
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 09:18 runtime_log.err
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas       667 Nov 23 09:18 6I8LDmsWug8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWwJKDmX3LmTn.diag
[2025-11-23 09:18:00] -rw-r--r-- 1 boincer umatlas     21402 Nov 23 09:18 stderr.txt
[2025-11-23 09:18:00] HITS file was successfully produced:
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas 918733917 Nov 23 09:16 shared/HITS.pool.root.1
[2025-11-23 09:18:00]  *** Contents of shared directory: ***
[2025-11-23 09:18:00] total 1306632
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas 411104548 Nov 22 22:04 ATLAS.root_0
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:04 start_atlas.sh
[2025-11-23 09:18:00] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 22:04 input.tar.gz
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas 918733917 Nov 23 09:16 HITS.pool.root.1
[2025-11-23 09:18:00] -rw------- 1 boincer umatlas   7526400 Nov 23 09:18 result.tar.gz
09:18:01 (18700): run_atlas exited; CPU time 311555.807591
09:18:01 (18700): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN