Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:45 (9668): wrapper (7.7.26015): starting
22:04:45 (9668): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:04:45] Arguments: --nthreads 8
[2025-11-22 22:04:45] Threads: 8
[2025-11-22 22:04:45] Checking for CVMFS
[2025-11-22 22:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:04:46] 2.11.2.0 8814 112778 128500 153193 1 90 11207344 18432001 1725 130560 0 80504206 99.972 4832016 31544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 22:04:46] CVMFS is ok
[2025-11-22 22:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 22:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 22:04:46] Further information can be found at the LHC@home message board.
[2025-11-22 22:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:04:46] Checking for apptainer binary...
[2025-11-22 22:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:04:46] Running /usr/bin/apptainer --version
[2025-11-22 22:04:46] apptainer version 1.3.2-1.el7
[2025-11-22 22:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:04:47] c-206-19.aglt2.org
[2025-11-22 22:04:47] apptainer works
[2025-11-22 22:04:47] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:04:47] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:04:47] Starting ATLAS job with PandaID=6895328601
[2025-11-22 22:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:32:02]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:32:02] 2025-11-23 22:31:29,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:32:02] 2025-11-23 22:31:29,967 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:32:02] 2025-11-23 22:31:29,971 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1723.5416666666667
[2025-11-23 17:32:02] 2025-11-23 22:31:29,973 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328601/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:32:02] 2025-11-23 22:31:29,974 | INFO     | extracted standard info from prmon json
[2025-11-23 17:32:02] 2025-11-23 22:31:29,974 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:32:02] 2025-11-23 22:31:29,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:32:02] 2025-11-23 22:31:29,991 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:32:02] 2025-11-23 22:31:29,993 | INFO     | sum of square deviations: 467917731798.71277
[2025-11-23 17:32:02] 2025-11-23 22:31:30,018 | INFO     | sum of deviations: 2335520274874.4893
[2025-11-23 17:32:02] 2025-11-23 22:31:30,019 | INFO     | mean x: 1763902078.602441
[2025-11-23 17:32:02] 2025-11-23 22:31:30,019 | INFO     | mean y: 2867656.4681778555
[2025-11-23 17:32:02] 2025-11-23 22:31:30,019 | INFO     | intersect: -8801306213.226984
[2025-11-23 17:32:02] 2025-11-23 22:31:30,020 | INFO     | chi2: 5.290054703249408
[2025-11-23 17:32:02] 2025-11-23 22:31:30,021 | INFO     | sum of square deviations: 461825353899.3902
[2025-11-23 17:32:02] 2025-11-23 22:31:30,047 | INFO     | sum of deviations: 2655209431446.888
[2025-11-23 17:32:02] 2025-11-23 22:31:30,047 | INFO     | mean x: 1763901926.1050787
[2025-11-23 17:32:02] 2025-11-23 22:31:30,047 | INFO     | mean y: 2875654.2259194395
[2025-11-23 17:32:02] 2025-11-23 22:31:30,047 | INFO     | intersect: -10138466718.592043
[2025-11-23 17:32:02] 2025-11-23 22:31:30,048 | INFO     | chi2: 2.8758759992571017
[2025-11-23 17:32:02] 2025-11-23 22:31:30,048 | INFO     | current chi2=2.8758759992571017 (change=45.63617655048823 %)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,049 | INFO     | sum of square deviations: 455786093275.0513
[2025-11-23 17:32:02] 2025-11-23 22:31:30,075 | INFO     | sum of deviations: 2764639234056.2407
[2025-11-23 17:32:02] 2025-11-23 22:31:30,075 | INFO     | mean x: 1763901773.6077397
[2025-11-23 17:32:02] 2025-11-23 22:31:30,075 | INFO     | mean y: 2878414.3817062443
[2025-11-23 17:32:02] 2025-11-23 22:31:30,075 | INFO     | intersect: -10696333606.978748
[2025-11-23 17:32:02] 2025-11-23 22:31:30,076 | INFO     | chi2: 2.460026979574377
[2025-11-23 17:32:02] 2025-11-23 22:31:30,076 | INFO     | current chi2=2.460026979574377 (change=14.459907860775182 %)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,076 | INFO     | right removable region: 1136
[2025-11-23 17:32:02] 2025-11-23 22:31:30,077 | INFO     | sum of square deviations: 461824932389.38934
[2025-11-23 17:32:02] 2025-11-23 22:31:30,103 | INFO     | sum of deviations: 2030206658398.7668
[2025-11-23 17:32:02] 2025-11-23 22:31:30,103 | INFO     | mean x: 1763902231.1050787
[2025-11-23 17:32:02] 2025-11-23 22:31:30,103 | INFO     | mean y: 2875290.401926445
[2025-11-23 17:32:02] 2025-11-23 22:31:30,103 | INFO     | intersect: -7751331559.856573
[2025-11-23 17:32:02] 2025-11-23 22:31:30,104 | INFO     | chi2: 3.196586274449384
[2025-11-23 17:32:02] 2025-11-23 22:31:30,104 | INFO     | current chi2=3.196586274449384 (change=39.5736631516138 %)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,105 | INFO     | sum of square deviations: 455785250255.05225
[2025-11-23 17:32:02] 2025-11-23 22:31:30,131 | INFO     | sum of deviations: 1932263277144.7058
[2025-11-23 17:32:02] 2025-11-23 22:31:30,131 | INFO     | mean x: 1763902383.6077397
[2025-11-23 17:32:02] 2025-11-23 22:31:30,132 | INFO     | mean y: 2877763.0105540897
[2025-11-23 17:32:02] 2025-11-23 22:31:30,132 | INFO     | intersect: -7475038203.787383
[2025-11-23 17:32:02] 2025-11-23 22:31:30,133 | INFO     | chi2: 3.0883888543437372
[2025-11-23 17:32:02] 2025-11-23 22:31:30,133 | INFO     | current chi2=3.0883888543437372 (change=3.3847802254073045 %)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,133 | INFO     | left removable region: 20
[2025-11-23 17:32:02] 2025-11-23 22:31:30,134 | INFO     | sum of square deviations: 430994304785.15
[2025-11-23 17:32:02] 2025-11-23 22:31:30,158 | INFO     | sum of deviations: 2218643653284.7373
[2025-11-23 17:32:02] 2025-11-23 22:31:30,158 | INFO     | mean x: 1763902353.1191757
[2025-11-23 17:32:02] 2025-11-23 22:31:30,158 | INFO     | mean y: 2892203.6711469535
[2025-11-23 17:32:02] 2025-11-23 22:31:30,159 | INFO     | intersect: -9077206343.600218
[2025-11-23 17:32:02] 2025-11-23 22:31:30,160 | INFO     | chi2: 0.18030567031553613
[2025-11-23 17:32:02] 2025-11-23 22:31:30,160 | INFO     | current memory leak: 5.15 B/s (using 1116 data points, chi2=0.18)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | could have reported an average CPU frequency of 2592 MHz (42 samples)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | ..............................
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . Timing measurements:
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . get job = 0 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . initial setup = 2 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . payload setup = 5 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . stage-in = 0 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . payload execution = 69954 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,161 | INFO     | . stage-out = 3 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,162 | INFO     | . log creation = 0 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,162 | INFO     | ..............................
[2025-11-23 17:32:02] 2025-11-23 22:31:30,242 | INFO     | 
[2025-11-23 17:32:02] 2025-11-23 22:31:30,242 | INFO     | job summary report
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | --------------------------------------------------
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | PanDA job id: 6895328601
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | task id: 47556137
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | errors: (none)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:32:02] 2025-11-23 22:31:30,243 | INFO     | pilot state: finished 
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | transexitcode: 0
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | exeerrorcode: 0
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | exeerrordiag: 
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | exitcode: 0
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | exitmsg: OK
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | cpuconsumptiontime: 542609 s
[2025-11-23 17:32:02] 2025-11-23 22:31:30,244 | INFO     | nevents: 1000
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | neventsw: 0
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | pid: 20779
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | pgrp: 20779
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | corecount: 8
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | event service: False
[2025-11-23 17:32:02] 2025-11-23 22:31:30,245 | INFO     | sizes: {0: 2298638, 1: 2298780, 5: 2299042, 12: 2299098, 69963: 2354461, 69964: 2354460, 69968: 2363638, 69969: 2363694, 69976: 2363718}
[2025-11-23 17:32:02] 2025-11-23 22:31:30,246 | INFO     | --------------------------------------------------
[2025-11-23 17:32:02] 2025-11-23 22:31:30,246 | INFO     | 
[2025-11-23 17:32:02] 2025-11-23 22:31:30,246 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 17:32:02] 2025-11-23 22:31:30,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:32:02] 2025-11-23 22:31:30,275 | INFO     | job 6895328601 has completed (purged errors)
[2025-11-23 17:32:02] 2025-11-23 22:31:30,275 | INFO     | overall cleanup function is called
[2025-11-23 17:32:02] 2025-11-23 22:31:31,290 | INFO     | --- collectZombieJob: --- 10, [20779]
[2025-11-23 17:32:02] 2025-11-23 22:31:31,290 | INFO     | zombie collector waiting for pid 20779
[2025-11-23 17:32:02] 2025-11-23 22:31:31,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:32:02] 2025-11-23 22:31:31,290 | INFO     | collected zombie processes
[2025-11-23 17:32:02] 2025-11-23 22:31:31,290 | INFO     | will attempt to kill all subprocesses of pid=20779
[2025-11-23 17:32:02] 2025-11-23 22:31:31,398 | INFO     | process IDs to be killed: [20779] (in reverse order)
[2025-11-23 17:32:02] 2025-11-23 22:31:31,452 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:32:02] 2025-11-23 22:31:31,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:32:02] 2025-11-23 22:31:31,460 | INFO     | did not find any defunct processes belonging to 20779
[2025-11-23 17:32:02] 2025-11-23 22:31:31,462 | INFO     | did not find any defunct processes belonging to 20779
[2025-11-23 17:32:02] 2025-11-23 22:31:31,464 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:32:02] 2025-11-23 22:31:31,465 | INFO     | ready for new job
[2025-11-23 17:32:02] 2025-11-23 22:31:31,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:32:02] 2025-11-23 22:31:31,469 | INFO     | ***************************************
[2025-11-23 17:32:02] 2025-11-23 22:31:31,469 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:32:02] 2025-11-23 22:31:31,469 | INFO     | ***************************************
[2025-11-23 17:32:02] 2025-11-23 22:31:31,469 | INFO     | 
[2025-11-23 17:32:02] 2025-11-23 22:31:31,470 | INFO     | architecture information:
[2025-11-23 17:32:02] 2025-11-23 22:31:31,470 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:32:02] 2025-11-23 22:31:31,486 | INFO     | cat /etc/os-release:
[2025-11-23 17:32:02] NAME="CentOS Linux"
[2025-11-23 17:32:02] VERSION="7 (Core)"
[2025-11-23 17:32:02] ID="centos"
[2025-11-23 17:32:02] ID_LIKE="rhel fedora"
[2025-11-23 17:32:02] VERSION_ID="7"
[2025-11-23 17:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:32:02] ANSI_COLOR="0;31"
[2025-11-23 17:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:32:02] HOME_URL="https://www.centos.org/"
[2025-11-23 17:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:32:02] 
[2025-11-23 17:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:32:02] 
[2025-11-23 17:32:02] 2025-11-23 22:31:31,486 | INFO     | ***************************************
[2025-11-23 17:32:02] 2025-11-23 22:31:31,990 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 17:32:02] 2025-11-23 22:31:32,007 | INFO     | sufficient remaining disk space (25923944448 B)
[2025-11-23 17:32:02] 2025-11-23 22:31:32,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:32:02] 2025-11-23 22:31:32,008 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:32:02] 2025-11-23 22:31:32,008 | INFO     | update_server=False
[2025-11-23 17:32:02] 2025-11-23 22:31:32,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:32:02] 2025-11-23 22:31:32,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:32:02] 2025-11-23 22:31:32,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:32:02] 2025-11-23 22:31:32,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 17:32:02] 2025-11-23 22:31:32,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 17:32:02] 2025-11-23 22:31:32,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:32:02] 2025-11-23 22:31:32,268 | INFO     | will abort loop
[2025-11-23 17:32:02] 2025-11-23 22:31:32,720 | INFO     | all data control threads have been joined
[2025-11-23 17:32:02] 2025-11-23 22:31:32,871 | INFO     | all job control threads have been joined
[2025-11-23 17:32:02] 2025-11-23 22:31:33,014 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,014 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,028 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,273 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,432 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,456 | INFO     | all payload control threads have been joined
[2025-11-23 17:32:02] 2025-11-23 22:31:33,726 | INFO     | [data] control thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,876 | INFO     | [job] control thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:33,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:32:02] 2025-11-23 22:31:34,002 | INFO     | [job] validate thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,019 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,048 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,295 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,421 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,462 | INFO     | [payload] control thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:34,550 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:37,902 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:32:02] 2025-11-23 22:31:54,313 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:32:02] 2025-11-23 22:31:54,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715024832320)>', '<ExcThread(monitor, started 140714444834560)>']
[2025-11-23 17:32:02] 2025-11-23 22:31:59,690 | INFO     | all workflow threads have been joined
[2025-11-23 17:32:02] 2025-11-23 22:31:59,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:32:02] 2025-11-23 22:31:59,691 | INFO     | traces error code: 0
[2025-11-23 17:32:02] 2025-11-23 22:31:59,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | INFO     | PID=13342 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | INFO     | .. there are 2 such processes running
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:32:02] 2025-11-23 22:32:02,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:32:02] 2025-11-23 22:32:02,195 | INFO     | [monitor] control thread has ended
[2025-11-23 17:32:02] 2025-11-23 22:32:02,275 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:32:02] 2025-11-23 22:32:02,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:32:02] 2025-11-23 22:32:02,282 [wrapper] pilotpid: 13342
[2025-11-23 17:32:02] 2025-11-23 22:32:02,285 [wrapper] Pilot exit status: 0
[2025-11-23 17:32:02] 2025-11-23 22:32:02,297 [wrapper] pandaids: 6895328601
[2025-11-23 17:32:02] 2025-11-23 22:32:02,343 [wrapper] cleanup supervisor_pilot 13212 13343
[2025-11-23 17:32:02] 2025-11-23 22:32:02,346 [wrapper] Test setup, not cleaning
[2025-11-23 17:32:02] 2025-11-23 22:32:02,349 [wrapper] apfmon messages muted
[2025-11-23 17:32:02] 2025-11-23 22:32:02,353 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:32:02] 2025-11-23 22:32:02,357 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:32:02]  *** Error codes and diagnostics ***
[2025-11-23 17:32:02]     "exeErrorCode": 0,
[2025-11-23 17:32:02]     "exeErrorDiag": "",
[2025-11-23 17:32:02]     "pilotErrorCode": 0,
[2025-11-23 17:32:02]     "pilotErrorDiag": "",
[2025-11-23 17:32:02]  *** Listing of results directory ***
[2025-11-23 17:32:02] total 1324300
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 12:05 pilot3.tar.gz
[2025-11-23 17:32:02] -rwx------ 1 boincer umatlas     36292 Nov 21 12:22 runpilot2-wrapper.sh
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 12:22 queuedata.json
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas       100 Nov 22 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:32:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 22:04 run_atlas
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas       105 Nov 22 22:04 job.xml
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas 410713555 Nov 22 22:04 EVNT.47483658._000080.pool.root.1
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:04 start_atlas.sh
[2025-11-23 17:32:02] drwxrwx--x 2 boincer umatlas      4096 Nov 22 22:04 shared
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas    590094 Nov 22 22:04 input.tar.gz
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas         0 Nov 22 22:04 boinc_lockfile
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 22:04 pandaJob.out
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas        57 Nov 22 22:04 setup.sh.local
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas    989784 Nov 22 22:04 agis_schedconf.cvmfs.json
[2025-11-23 17:32:02] drwx------ 5 boincer umatlas      4096 Nov 22 22:04 pilot3
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas       533 Nov 23 17:21 boinc_task_state.xml
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 17:30 init_data.xml
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas 917428243 Nov 23 17:30 HITS.47556137._000799.pool.root.1
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas        95 Nov 23 17:31 pilot_heartbeat.json
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas      1068 Nov 23 17:31 memory_monitor_summary.json
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas   1526164 Nov 23 17:31 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas   2316491 Nov 23 17:31 log.47556137._000799.job.log.tgz.1
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas      7989 Nov 23 17:31 heartbeat.json
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:31 boinc_mmap_file
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:31 wrapper_checkpoint.txt
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas       820 Nov 23 17:32 pilotlog.txt
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas   9698730 Nov 23 17:32 log.47556137._000799.job.log.1
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas       353 Nov 23 17:32 output.list
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:32 runtime_log
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas  12032000 Nov 23 17:32 result.tar.gz
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas       668 Nov 23 17:32 Sa3MDml0jg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJkHKDmoPWxFn.diag
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 17:32 runtime_log.err
[2025-11-23 17:32:02] -rw-r--r-- 1 boincer umatlas     21317 Nov 23 17:32 stderr.txt
[2025-11-23 17:32:02] HITS file was successfully produced:
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas 917428243 Nov 23 17:30 shared/HITS.pool.root.1
[2025-11-23 17:32:02]  *** Contents of shared directory: ***
[2025-11-23 17:32:02] total 1309368
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas 410713555 Nov 22 22:04 ATLAS.root_0
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 22:04 start_atlas.sh
[2025-11-23 17:32:02] -rw-r--r-- 2 boincer umatlas    590094 Nov 22 22:04 input.tar.gz
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas 917428243 Nov 23 17:30 HITS.pool.root.1
[2025-11-23 17:32:02] -rw------- 1 boincer umatlas  12032000 Nov 23 17:32 result.tar.gz
17:32:03 (9668): run_atlas exited; CPU time 541683.910232
17:32:03 (9668): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN