Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:39 (2055836): wrapper (7.7.26015): starting
23:22:39 (2055836): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 23:22:39] Arguments: --nthreads 4
[2025-11-25 23:22:39] Threads: 4
[2025-11-25 23:22:39] Checking for CVMFS
[2025-11-25 23:22:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:22:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:22:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:22:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:22:40] 2.9.2.0 504476 10307 100528 153300 1 81 35691934 36864000 0 130560 0 4086101 99.933 538753 7193 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 23:22:40] CVMFS is ok
[2025-11-25 23:22:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:22:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:22:40] Further information can be found at the LHC@home message board.
[2025-11-25 23:22:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:22:40] Checking for apptainer binary...
[2025-11-25 23:22:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:22:40] Running /usr/bin/apptainer --version
[2025-11-25 23:22:40] apptainer version 1.4.1-1.1
[2025-11-25 23:22:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:22:40] thA338
[2025-11-25 23:22:40] apptainer works
[2025-11-25 23:22:40] Set ATHENA_PROC_NUMBER=4
[2025-11-25 23:22:40] Set ATHENA_CORE_NUMBER=4
[2025-11-25 23:22:40] Starting ATLAS job with PandaID=6895335988
[2025-11-25 23:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:19:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:19:25] 2025-11-26 05:18:25,880 | INFO     | cat /etc/os-release:
[2025-11-26 06:19:25] NAME="CentOS Linux"
[2025-11-26 06:19:25] VERSION="7 (Core)"
[2025-11-26 06:19:25] ID="centos"
[2025-11-26 06:19:25] ID_LIKE="rhel fedora"
[2025-11-26 06:19:25] VERSION_ID="7"
[2025-11-26 06:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:19:25] ANSI_COLOR="0;31"
[2025-11-26 06:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:19:25] HOME_URL="https://www.centos.org/"
[2025-11-26 06:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:19:25] 
[2025-11-26 06:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:19:25] 
[2025-11-26 06:19:25] 2025-11-26 05:18:25,880 | INFO     | ***************************************
[2025-11-26 06:19:25] 2025-11-26 05:18:26,383 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 06:19:25] 2025-11-26 05:18:26,401 | INFO     | sufficient remaining disk space (220343566336 B)
[2025-11-26 06:19:25] 2025-11-26 05:18:26,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:19:25] 2025-11-26 05:18:26,401 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:19:25] 2025-11-26 05:18:26,401 | INFO     | update_server=False
[2025-11-26 06:19:25] 2025-11-26 05:18:26,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:19:25] 2025-11-26 05:18:26,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:19:25] 2025-11-26 05:18:26,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:19:25] 2025-11-26 05:18:26,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:19:25] 2025-11-26 05:18:26,402 | INFO     | aborting loop
[2025-11-26 06:19:25] 2025-11-26 05:18:26,838 | INFO     | all data control threads have been joined
[2025-11-26 06:19:25] 2025-11-26 05:18:27,119 | INFO     | all payload control threads have been joined
[2025-11-26 06:19:25] 2025-11-26 05:18:27,407 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:27,408 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:27,408 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:27,502 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:27,556 | INFO     | all job control threads have been joined
[2025-11-26 06:19:25] 2025-11-26 05:18:27,735 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:27,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:19:25] 2025-11-26 05:18:27,844 | INFO     | [data] control thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,125 | INFO     | [payload] control thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,269 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,328 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,349 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,397 | INFO     | [job] validate thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,561 | INFO     | [job] control thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,633 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:28,829 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:29,751 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:30,409 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:19:25] 2025-11-26 05:18:56,968 | INFO     | PID=2059636 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:19:25] 2025-11-26 05:18:56,968 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:19:25] 2025-11-26 05:18:56,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:19:25] 2025-11-26 05:18:56,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:19:25] 2025-11-26 05:19:18,337 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:19:25] 2025-11-26 05:19:19,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995074729792)>', '<ExcThread(monitor, started 139993980856064)>']
[2025-11-26 06:19:25] 2025-11-26 05:19:20,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:19:25] 2025-11-26 05:19:20,092 | INFO     | [monitor] control thread has ended
[2025-11-26 06:19:25] 2025-11-26 05:19:24,837 | INFO     | all workflow threads have been joined
[2025-11-26 06:19:25] 2025-11-26 05:19:24,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:19:25] 2025-11-26 05:19:24,837 | INFO     | traces error code: 0
[2025-11-26 06:19:25] 2025-11-26 05:19:24,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:19:25] 2025-11-26 05:19:24,919 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:19:25] 2025-11-26 05:19:24,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:19:25] 2025-11-26 05:19:24,927 [wrapper] pilotpid: 2059636
[2025-11-26 06:19:25] 2025-11-26 05:19:24,931 [wrapper] Pilot exit status: 0
[2025-11-26 06:19:25] 2025-11-26 05:19:24,943 [wrapper] pandaids: 6895335988
[2025-11-26 06:19:25] 2025-11-26 05:19:24,968 [wrapper] cleanup supervisor_pilot 2111857 2059637
[2025-11-26 06:19:25] 2025-11-26 05:19:24,972 [wrapper] Test setup, not cleaning
[2025-11-26 06:19:25] 2025-11-26 05:19:24,976 [wrapper] apfmon messages muted
[2025-11-26 06:19:25] 2025-11-26 05:19:24,980 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:19:25] 2025-11-26 05:19:24,983 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:19:25]  *** Error codes and diagnostics ***
[2025-11-26 06:19:25]     "exeErrorCode": 0,
[2025-11-26 06:19:25]     "exeErrorDiag": "",
[2025-11-26 06:19:25]     "pilotErrorCode": 0,
[2025-11-26 06:19:25]     "pilotErrorDiag": "",
[2025-11-26 06:19:25]  *** Listing of results directory ***
[2025-11-26 06:19:25] total 1314020
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc    576529 Nov 22 05:55 pilot3.tar.gz
[2025-11-26 06:19:25] -rwx------ 1 boinc boinc     36292 Nov 22 06:05 runpilot2-wrapper.sh
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      5112 Nov 22 06:05 queuedata.json
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:19:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:22 run_atlas
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:22 job.xml
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc 412390553 Nov 25 23:22 EVNT.47483658._000262.pool.root.1
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc    590098 Nov 25 23:22 input.tar.gz
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:22 start_atlas.sh
[2025-11-26 06:19:25] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:22 shared
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:22 boinc_setup_complete
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      6376 Nov 25 23:22 init_data.xml
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:22 boinc_lockfile
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      2786 Nov 25 23:22 pandaJob.out
[2025-11-26 06:19:25] -rw------- 1 boinc boinc    991877 Nov 25 23:22 agis_schedconf.cvmfs.json
[2025-11-26 06:19:25] drwx------ 5 boinc boinc      4096 Nov 25 23:22 pilot3
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc       532 Nov 26 06:11 boinc_task_state.xml
[2025-11-26 06:19:25] -rw------- 1 boinc boinc 919710650 Nov 26 06:17 HITS.47556137._002582.pool.root.1
[2025-11-26 06:19:25] -rw------- 1 boinc boinc        95 Nov 26 06:18 pilot_heartbeat.json
[2025-11-26 06:19:25] -rw------- 1 boinc boinc      1029 Nov 26 06:18 memory_monitor_summary.json
[2025-11-26 06:19:25] -rw------- 1 boinc boinc   1516240 Nov 26 06:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:19:25] -rw------- 1 boinc boinc   1259106 Nov 26 06:18 log.47556137._002582.job.log.tgz.1
[2025-11-26 06:19:25] -rw------- 1 boinc boinc      8583 Nov 26 06:18 heartbeat.json
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      8192 Nov 26 06:19 boinc_mmap_file
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc        28 Nov 26 06:19 wrapper_checkpoint.txt
[2025-11-26 06:19:25] -rw------- 1 boinc boinc      4752 Nov 26 06:19 pilotlog.txt
[2025-11-26 06:19:25] -rw------- 1 boinc boinc   3516335 Nov 26 06:19 log.47556137._002582.job.log.1
[2025-11-26 06:19:25] -rw------- 1 boinc boinc       353 Nov 26 06:19 output.list
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc       620 Nov 26 06:19 runtime_log
[2025-11-26 06:19:25] -rw------- 1 boinc boinc   4792320 Nov 26 06:19 result.tar.gz
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      8898 Nov 26 06:19 runtime_log.err
[2025-11-26 06:19:25] -rw------- 1 boinc boinc       665 Nov 26 06:19 FtILDmczug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaxHKDmGH8eim.diag
[2025-11-26 06:19:25] -rw-r--r-- 1 boinc boinc      8788 Nov 26 06:19 stderr.txt
[2025-11-26 06:19:25] HITS file was successfully produced:
[2025-11-26 06:19:25] -rw------- 1 boinc boinc 919710650 Nov 26 06:17 shared/HITS.pool.root.1
[2025-11-26 06:19:25]  *** Contents of shared directory: ***
[2025-11-26 06:19:25] total 1306168
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc 412390553 Nov 25 23:22 ATLAS.root_0
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc    590098 Nov 25 23:22 input.tar.gz
[2025-11-26 06:19:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:22 start_atlas.sh
[2025-11-26 06:19:25] -rw------- 1 boinc boinc 919710650 Nov 26 06:17 HITS.pool.root.1
[2025-11-26 06:19:25] -rw------- 1 boinc boinc   4792320 Nov 26 06:19 result.tar.gz
06:19:27 (2055836): run_atlas exited; CPU time 97226.811580
06:19:27 (2055836): called boinc_finish(0)

</stderr_txt>
]]>

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