Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:49 (7465): wrapper (7.7.26015): starting
23:30:49 (7465): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:30:49] Arguments: --nthreads 8
[2025-11-22 23:30:49] Threads: 8
[2025-11-22 23:30:49] Checking for CVMFS
[2025-11-22 23:30:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:30:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:30:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:30:49] 2.11.2.0 2857 62839 87240 153197 0 81 13414456 20275200 1 130560 0 16427769 99.843 3631688 29377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:30:49] CVMFS is ok
[2025-11-22 23:30:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:30:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:30:49] Further information can be found at the LHC@home message board.
[2025-11-22 23:30:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:30:49] Checking for apptainer binary...
[2025-11-22 23:30:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:30:49] Running /usr/bin/apptainer --version
[2025-11-22 23:30:49] apptainer version 1.3.2-1.el7
[2025-11-22 23:30:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:30:51] c-204-10.aglt2.org
[2025-11-22 23:30:51] apptainer works
[2025-11-22 23:30:51] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:30:51] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:30:51] Starting ATLAS job with PandaID=6895335427
[2025-11-22 23:30:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:16:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:16:30] 2025-11-23 17:15:49,541 | INFO     | monitor loop #3373: job 0:6895335427 is in state 'finished'
[2025-11-23 12:16:30] 2025-11-23 17:15:49,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,014 | INFO     | time since job start (45882s) is within the limit (172800.0s)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,507 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:16:30] 2025-11-23 17:15:51,511 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-11-23 12:16:30] 2025-11-23 17:15:51,513 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895335427/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,513 | INFO     | extracted standard info from prmon json
[2025-11-23 12:16:30] 2025-11-23 17:15:51,514 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:16:30] 2025-11-23 17:15:51,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:16:30] 2025-11-23 17:15:51,527 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:16:30] 2025-11-23 17:15:51,528 | INFO     | sum of square deviations: 131866079069.4681
[2025-11-23 12:16:30] 2025-11-23 17:15:51,540 | INFO     | sum of deviations: 826868327286.9617
[2025-11-23 12:16:30] 2025-11-23 17:15:51,540 | INFO     | mean x: 1763895208.0265958
[2025-11-23 12:16:30] 2025-11-23 17:15:51,540 | INFO     | mean y: 2877508.301861702
[2025-11-23 12:16:30] 2025-11-23 17:15:51,540 | INFO     | intersect: -11057655196.26187
[2025-11-23 12:16:30] 2025-11-23 17:15:51,541 | INFO     | chi2: 5.588480620618766
[2025-11-23 12:16:30] 2025-11-23 17:15:51,542 | INFO     | sum of square deviations: 129253350858.07213
[2025-11-23 12:16:30] 2025-11-23 17:15:51,554 | INFO     | sum of deviations: 1069695348445.3011
[2025-11-23 12:16:30] 2025-11-23 17:15:51,554 | INFO     | mean x: 1763895055.5301204
[2025-11-23 12:16:30] 2025-11-23 17:15:51,555 | INFO     | mean y: 2891673.986613119
[2025-11-23 12:16:30] 2025-11-23 17:15:51,555 | INFO     | intersect: -14595030341.343481
[2025-11-23 12:16:30] 2025-11-23 17:15:51,556 | INFO     | chi2: 2.6037160338512666
[2025-11-23 12:16:30] 2025-11-23 17:15:51,556 | INFO     | current chi2=2.6037160338512666 (change=53.40923212214738 %)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,557 | INFO     | sum of square deviations: 126675367484.15775
[2025-11-23 12:16:30] 2025-11-23 17:15:51,568 | INFO     | sum of deviations: 1128028037287.8306
[2025-11-23 12:16:30] 2025-11-23 17:15:51,568 | INFO     | mean x: 1763894903.0336928
[2025-11-23 12:16:30] 2025-11-23 17:15:51,569 | INFO     | mean y: 2895116.0067385444
[2025-11-23 12:16:30] 2025-11-23 17:15:51,569 | INFO     | intersect: -15704364669.128231
[2025-11-23 12:16:30] 2025-11-23 17:15:51,570 | INFO     | chi2: 2.2877137137839054
[2025-11-23 12:16:30] 2025-11-23 17:15:51,570 | INFO     | current chi2=2.2877137137839054 (change=12.13658924241246 %)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,570 | INFO     | right removable region: 741
[2025-11-23 12:16:30] 2025-11-23 17:15:51,571 | INFO     | sum of square deviations: 129253109298.07204
[2025-11-23 12:16:30] 2025-11-23 17:15:51,582 | INFO     | sum of deviations: 624742275490.0118
[2025-11-23 12:16:30] 2025-11-23 17:15:51,583 | INFO     | mean x: 1763895360.5301204
[2025-11-23 12:16:30] 2025-11-23 17:15:51,583 | INFO     | mean y: 2889286.421686747
[2025-11-23 12:16:30] 2025-11-23 17:15:51,583 | INFO     | intersect: -8522863070.704003
[2025-11-23 12:16:30] 2025-11-23 17:15:51,584 | INFO     | chi2: 3.4501569775502596
[2025-11-23 12:16:30] 2025-11-23 17:15:51,584 | INFO     | current chi2=3.4501569775502596 (change=38.26305910732044 %)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,585 | INFO     | sum of square deviations: 126674884364.1578
[2025-11-23 12:16:30] 2025-11-23 17:15:51,596 | INFO     | sum of deviations: 580121368274.0262
[2025-11-23 12:16:30] 2025-11-23 17:15:51,596 | INFO     | mean x: 1763895513.0336928
[2025-11-23 12:16:30] 2025-11-23 17:15:51,597 | INFO     | mean y: 2891924.398921833
[2025-11-23 12:16:30] 2025-11-23 17:15:51,597 | INFO     | intersect: -8075058836.320722
[2025-11-23 12:16:30] 2025-11-23 17:15:51,597 | INFO     | chi2: 3.4044793834586535
[2025-11-23 12:16:30] 2025-11-23 17:15:51,598 | INFO     | current chi2=3.4044793834586535 (change=1.3239279948368872 %)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,598 | INFO     | left removable region: 20
[2025-11-23 12:16:30] 2025-11-23 17:15:51,599 | INFO     | sum of square deviations: 116221303531.04344
[2025-11-23 12:16:30] 2025-11-23 17:15:51,610 | INFO     | sum of deviations: 826647110987.6373
[2025-11-23 12:16:30] 2025-11-23 17:15:51,610 | INFO     | mean x: 1763895482.5409155
[2025-11-23 12:16:30] 2025-11-23 17:15:51,610 | INFO     | mean y: 2912983.6393897366
[2025-11-23 12:16:30] 2025-11-23 17:15:51,610 | INFO     | intersect: -12543144068.08796
[2025-11-23 12:16:30] 2025-11-23 17:15:51,611 | INFO     | chi2: 0.07484721841825653
[2025-11-23 12:16:30] 2025-11-23 17:15:51,611 | INFO     | current memory leak: 7.11 B/s (using 721 data points, chi2=0.07)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | could have reported an average CPU frequency of 2162 MHz (29 samples)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | ..............................
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | . Timing measurements:
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | . get job = 0 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | . initial setup = 2 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,612 | INFO     | . payload setup = 9 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,613 | INFO     | . stage-in = 0 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,613 | INFO     | . payload execution = 45841 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,613 | INFO     | . stage-out = 4 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,613 | INFO     | . log creation = 0 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,613 | INFO     | ..............................
[2025-11-23 12:16:30] 2025-11-23 17:15:51,727 | INFO     | 
[2025-11-23 12:16:30] 2025-11-23 17:15:51,727 | INFO     | job summary report
[2025-11-23 12:16:30] 2025-11-23 17:15:51,727 | INFO     | --------------------------------------------------
[2025-11-23 12:16:30] 2025-11-23 17:15:51,727 | INFO     | PanDA job id: 6895335427
[2025-11-23 12:16:30] 2025-11-23 17:15:51,727 | INFO     | task id: 47556137
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | errors: (none)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | pilot state: finished 
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | transexitcode: 0
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | exeerrorcode: 0
[2025-11-23 12:16:30] 2025-11-23 17:15:51,728 | INFO     | exeerrordiag: 
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | exitcode: 0
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | exitmsg: OK
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | cpuconsumptiontime: 353724 s
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | nevents: 1000
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | neventsw: 0
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | pid: 18659
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | pgrp: 18659
[2025-11-23 12:16:30] 2025-11-23 17:15:51,729 | INFO     | corecount: 8
[2025-11-23 12:16:30] 2025-11-23 17:15:51,730 | INFO     | event service: False
[2025-11-23 12:16:30] 2025-11-23 17:15:51,730 | INFO     | sizes: {0: 2298630, 1: 2298829, 6: 2299091, 11: 2299119, 45854: 2345374, 45859: 2354552, 45865: 2354742}
[2025-11-23 12:16:30] 2025-11-23 17:15:51,730 | INFO     | --------------------------------------------------
[2025-11-23 12:16:30] 2025-11-23 17:15:51,730 | INFO     | 
[2025-11-23 12:16:30] 2025-11-23 17:15:51,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:16:30] 2025-11-23 17:15:51,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:16:30] 2025-11-23 17:15:51,765 | INFO     | job 6895335427 has completed (purged errors)
[2025-11-23 12:16:30] 2025-11-23 17:15:51,765 | INFO     | overall cleanup function is called
[2025-11-23 12:16:30] 2025-11-23 17:15:52,781 | INFO     | --- collectZombieJob: --- 10, [18659]
[2025-11-23 12:16:30] 2025-11-23 17:15:52,781 | INFO     | zombie collector waiting for pid 18659
[2025-11-23 12:16:30] 2025-11-23 17:15:52,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:16:30] 2025-11-23 17:15:52,782 | INFO     | collected zombie processes
[2025-11-23 12:16:30] 2025-11-23 17:15:52,782 | INFO     | will attempt to kill all subprocesses of pid=18659
[2025-11-23 12:16:30] 2025-11-23 17:15:52,874 | INFO     | process IDs to be killed: [18659] (in reverse order)
[2025-11-23 12:16:30] 2025-11-23 17:15:52,946 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:16:30] 2025-11-23 17:15:52,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:16:30] 2025-11-23 17:15:52,950 | INFO     | did not find any defunct processes belonging to 18659
[2025-11-23 12:16:30] 2025-11-23 17:15:52,954 | INFO     | did not find any defunct processes belonging to 18659
[2025-11-23 12:16:30] 2025-11-23 17:15:52,956 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:16:30] 2025-11-23 17:15:52,957 | INFO     | ready for new job
[2025-11-23 12:16:30] 2025-11-23 17:15:52,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:16:30] 2025-11-23 17:15:52,961 | INFO     | ***************************************
[2025-11-23 12:16:30] 2025-11-23 17:15:52,961 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:16:30] 2025-11-23 17:15:52,961 | INFO     | ***************************************
[2025-11-23 12:16:30] 2025-11-23 17:15:52,962 | INFO     | 
[2025-11-23 12:16:30] 2025-11-23 17:15:52,962 | INFO     | architecture information:
[2025-11-23 12:16:30] 2025-11-23 17:15:52,963 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:16:30] 2025-11-23 17:15:52,983 | INFO     | cat /etc/os-release:
[2025-11-23 12:16:30] NAME="CentOS Linux"
[2025-11-23 12:16:30] VERSION="7 (Core)"
[2025-11-23 12:16:30] ID="centos"
[2025-11-23 12:16:30] ID_LIKE="rhel fedora"
[2025-11-23 12:16:30] VERSION_ID="7"
[2025-11-23 12:16:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:16:30] ANSI_COLOR="0;31"
[2025-11-23 12:16:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:16:30] HOME_URL="https://www.centos.org/"
[2025-11-23 12:16:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:16:30] 
[2025-11-23 12:16:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:16:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:16:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:16:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:16:30] 
[2025-11-23 12:16:30] 2025-11-23 17:15:52,983 | INFO     | ***************************************
[2025-11-23 12:16:30] 2025-11-23 17:15:53,487 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:16:30] 2025-11-23 17:15:53,508 | INFO     | sufficient remaining disk space (17455644672 B)
[2025-11-23 12:16:30] 2025-11-23 17:15:53,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:16:30] 2025-11-23 17:15:53,509 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:16:30] 2025-11-23 17:15:53,509 | INFO     | update_server=False
[2025-11-23 12:16:30] 2025-11-23 17:15:53,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:16:30] 2025-11-23 17:15:53,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:16:30] 2025-11-23 17:15:53,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:16:30] 2025-11-23 17:15:53,511 | INFO     | aborting loop
[2025-11-23 12:16:30] 2025-11-23 17:15:53,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:16:30] 2025-11-23 17:15:54,373 | INFO     | all data control threads have been joined
[2025-11-23 12:16:30] 2025-11-23 17:15:54,440 | INFO     | all payload control threads have been joined
[2025-11-23 12:16:30] 2025-11-23 17:15:54,510 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,514 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,516 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,606 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,728 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,751 | INFO     | all job control threads have been joined
[2025-11-23 12:16:30] 2025-11-23 17:15:54,796 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:54,907 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,379 | INFO     | [data] control thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,406 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,446 | INFO     | [payload] control thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,556 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,757 | INFO     | [job] control thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,757 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:55,765 | INFO     | [job] validate thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:15:56,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:16:30] 2025-11-23 17:16:00,146 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:16:30] 2025-11-23 17:16:14,265 [wrapper] supervise_pilot (15 min periods counter: 52)
[2025-11-23 12:16:30] 2025-11-23 17:16:24,232 | INFO     | PID=11268 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 12:16:30] 2025-11-23 17:16:24,233 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:16:30] 2025-11-23 17:16:24,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:16:30] 2025-11-23 17:16:24,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:16:30] 2025-11-23 17:16:25,266 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:16:30] 2025-11-23 17:16:25,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786003482432)>', '<ExcThread(monitor, started 139784810919680)>']
[2025-11-23 12:16:30] 2025-11-23 17:16:26,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:16:30] 2025-11-23 17:16:26,250 | INFO     | [monitor] control thread has ended
[2025-11-23 12:16:30] 2025-11-23 17:16:30,311 | INFO     | all workflow threads have been joined
[2025-11-23 12:16:30] 2025-11-23 17:16:30,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:16:30] 2025-11-23 17:16:30,312 | INFO     | traces error code: 0
[2025-11-23 12:16:30] 2025-11-23 17:16:30,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:16:30] 2025-11-23 17:16:30,523 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:16:30] 2025-11-23 17:16:30,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:16:30] 2025-11-23 17:16:30,534 [wrapper] pilotpid: 11268
[2025-11-23 12:16:30] 2025-11-23 17:16:30,539 [wrapper] Pilot exit status: 0
[2025-11-23 12:16:30] 2025-11-23 17:16:30,558 [wrapper] pandaids: 6895335427
[2025-11-23 12:16:30] 2025-11-23 17:16:30,617 [wrapper] cleanup supervisor_pilot 13856 11269
[2025-11-23 12:16:30] 2025-11-23 17:16:30,622 [wrapper] Test setup, not cleaning
[2025-11-23 12:16:30] 2025-11-23 17:16:30,628 [wrapper] apfmon messages muted
[2025-11-23 12:16:30] 2025-11-23 17:16:30,633 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:16:30] 2025-11-23 17:16:30,638 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:16:30]  *** Error codes and diagnostics ***
[2025-11-23 12:16:30]     "exeErrorCode": 0,
[2025-11-23 12:16:30]     "exeErrorDiag": "",
[2025-11-23 12:16:30]     "pilotErrorCode": 0,
[2025-11-23 12:16:30]     "pilotErrorDiag": "",
[2025-11-23 12:16:30]  *** Listing of results directory ***
[2025-11-23 12:16:30] total 1329180
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 23:34 pilot3.tar.gz
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 23:37 queuedata.json
[2025-11-23 12:16:30] -rwx------ 1 boincer umatlas     36292 Nov 21 23:38 runpilot2-wrapper.sh
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas       100 Nov 22 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:16:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 23:30 run_atlas
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas       105 Nov 22 23:30 job.xml
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas 411737588 Nov 22 23:30 EVNT.47483658._000255.pool.root.1
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:30 start_atlas.sh
[2025-11-23 12:16:30] drwxrwx--x 2 boincer umatlas      4096 Nov 22 23:30 shared
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas    590103 Nov 22 23:30 input.tar.gz
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas         0 Nov 22 23:30 boinc_lockfile
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 23:30 pandaJob.out
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas        57 Nov 22 23:30 setup.sh.local
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas    989784 Nov 22 23:31 agis_schedconf.cvmfs.json
[2025-11-23 12:16:30] drwx------ 5 boincer umatlas      4096 Nov 22 23:31 pilot3
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas       533 Nov 23 12:05 boinc_task_state.xml
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 12:10 init_data.xml
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas 928801247 Nov 23 12:15 HITS.47556137._002511.pool.root.1
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas        95 Nov 23 12:15 pilot_heartbeat.json
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas      1062 Nov 23 12:15 memory_monitor_summary.json
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas   1526164 Nov 23 12:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas   1991186 Nov 23 12:15 log.47556137._002511.job.log.tgz.1
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas      8653 Nov 23 12:15 heartbeat.json
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:16 boinc_mmap_file
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:16 wrapper_checkpoint.txt
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas      4746 Nov 23 12:16 pilotlog.txt
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas   6316357 Nov 23 12:16 log.47556137._002511.job.log.1
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas       353 Nov 23 12:16 output.list
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:16 runtime_log
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas   8325120 Nov 23 12:16 result.tar.gz
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 12:16 runtime_log.err
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas       668 Nov 23 12:16 5xgMDmAZug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2wHKDmM5gCqn.diag
[2025-11-23 12:16:30] -rw-r--r-- 1 boincer umatlas     21279 Nov 23 12:16 stderr.txt
[2025-11-23 12:16:30] HITS file was successfully produced:
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas 928801247 Nov 23 12:15 shared/HITS.pool.root.1
[2025-11-23 12:16:30]  *** Contents of shared directory: ***
[2025-11-23 12:16:30] total 1317856
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas 411737588 Nov 22 23:30 ATLAS.root_0
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 23:30 start_atlas.sh
[2025-11-23 12:16:30] -rw-r--r-- 2 boincer umatlas    590103 Nov 22 23:30 input.tar.gz
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas 928801247 Nov 23 12:15 HITS.pool.root.1
[2025-11-23 12:16:30] -rw------- 1 boincer umatlas   8325120 Nov 23 12:16 result.tar.gz
12:16:32 (7465): run_atlas exited; CPU time 349497.828920
12:16:32 (7465): called boinc_finish(0)

</stderr_txt>
]]>

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