Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:56 (998217): wrapper (7.7.26015): starting
14:46:56 (998217): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 14:46:56] Arguments: --nthreads 12
[2025-11-23 14:46:56] Threads: 12
[2025-11-23 14:46:56] Checking for CVMFS
[2025-11-23 14:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:46:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:46:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:46:56] 2.13.3.0 8990 2816 72072 153210 2 81 3355930 4097024 1044 130560 0 2188026 99.990 105298 7495 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 14:46:56] CVMFS is ok
[2025-11-23 14:46:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:46:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:46:56] Further information can be found at the LHC@home message board.
[2025-11-23 14:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:46:56] Checking for apptainer binary...
[2025-11-23 14:46:56] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-23 14:46:56] apptainer is not installed, using version from CVMFS
[2025-11-23 14:46:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:46:56] pckelar2.cern.ch
[2025-11-23 14:46:56] apptainer works
[2025-11-23 14:46:56] Set ATHENA_PROC_NUMBER=12
[2025-11-23 14:46:56] Set ATHENA_CORE_NUMBER=12
[2025-11-23 14:46:56] Starting ATLAS job with PandaID=6895335428
[2025-11-23 14:46:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:45:38]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:45:38] 2025-11-24 01:45:04,328 | INFO     | monitor loop #3052: job 0:6895335428 is in state 'finished'
[2025-11-24 02:45:38] 2025-11-24 01:45:04,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:45:38] 2025-11-24 01:45:04,657 | INFO     | time since job start (43077s) is within the limit (172800.0s)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,843 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 02:45:38] 2025-11-24 01:45:05,849 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.4194583333333
[2025-11-24 02:45:38] 2025-11-24 01:45:05,854 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6895335428/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,855 | INFO     | extracted standard info from prmon json
[2025-11-24 02:45:38] 2025-11-24 01:45:05,856 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:45:38] 2025-11-24 01:45:05,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:45:38] 2025-11-24 01:45:05,875 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:45:38] 2025-11-24 01:45:05,877 | INFO     | sum of square deviations: 109116707082.13736
[2025-11-24 02:45:38] 2025-11-24 01:45:05,893 | INFO     | sum of deviations: 1488843343759.112
[2025-11-24 02:45:38] 2025-11-24 01:45:05,893 | INFO     | mean x: 1763927160.4773371
[2025-11-24 02:45:38] 2025-11-24 01:45:05,893 | INFO     | mean y: 3600093.0382436262
[2025-11-24 02:45:38] 2025-11-24 01:45:05,894 | INFO     | intersect: -24064311063.552288
[2025-11-24 02:45:38] 2025-11-24 01:45:05,895 | INFO     | chi2: 6.156420977181014
[2025-11-24 02:45:38] 2025-11-24 01:45:05,896 | INFO     | sum of square deviations: 106814948784.82736
[2025-11-24 02:45:38] 2025-11-24 01:45:05,912 | INFO     | sum of deviations: 1774287096039.23
[2025-11-24 02:45:38] 2025-11-24 01:45:05,912 | INFO     | mean x: 1763927007.9843082
[2025-11-24 02:45:38] 2025-11-24 01:45:05,912 | INFO     | mean y: 3618998.566333809
[2025-11-24 02:45:38] 2025-11-24 01:45:05,913 | INFO     | intersect: -29296708008.342358
[2025-11-24 02:45:38] 2025-11-24 01:45:05,914 | INFO     | chi2: 3.1066808823627325
[2025-11-24 02:45:38] 2025-11-24 01:45:05,914 | INFO     | current chi2=3.1066808823627325 (change=49.53754959451682 %)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,915 | INFO     | sum of square deviations: 104545710595.90836
[2025-11-24 02:45:38] 2025-11-24 01:45:05,931 | INFO     | sum of deviations: 1834940105884.1587
[2025-11-24 02:45:38] 2025-11-24 01:45:05,931 | INFO     | mean x: 1763926855.4885058
[2025-11-24 02:45:38] 2025-11-24 01:45:05,931 | INFO     | mean y: 3623058.2701149425
[2025-11-24 02:45:38] 2025-11-24 01:45:05,932 | INFO     | intersect: -30956041499.298695
[2025-11-24 02:45:38] 2025-11-24 01:45:05,933 | INFO     | chi2: 2.728914138119445
[2025-11-24 02:45:38] 2025-11-24 01:45:05,933 | INFO     | current chi2=2.728914138119445 (change=12.159818100016237 %)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,933 | INFO     | right removable region: 695
[2025-11-24 02:45:38] 2025-11-24 01:45:05,934 | INFO     | sum of square deviations: 106814570707.7939
[2025-11-24 02:45:38] 2025-11-24 01:45:05,950 | INFO     | sum of deviations: 1232321465626.0361
[2025-11-24 02:45:38] 2025-11-24 01:45:05,950 | INFO     | mean x: 1763927312.9828815
[2025-11-24 02:45:38] 2025-11-24 01:45:05,951 | INFO     | mean y: 3617060.169757489
[2025-11-24 02:45:38] 2025-11-24 01:45:05,951 | INFO     | intersect: -20346841469.869076
[2025-11-24 02:45:38] 2025-11-24 01:45:05,952 | INFO     | chi2: 3.7716804467832414
[2025-11-24 02:45:38] 2025-11-24 01:45:05,952 | INFO     | current chi2=3.7716804467832414 (change=38.735826208716 %)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,953 | INFO     | sum of square deviations: 104545210887.79327
[2025-11-24 02:45:38] 2025-11-24 01:45:05,969 | INFO     | sum of deviations: 1158759306648.3452
[2025-11-24 02:45:38] 2025-11-24 01:45:05,969 | INFO     | mean x: 1763927465.4827585
[2025-11-24 02:45:38] 2025-11-24 01:45:05,969 | INFO     | mean y: 3622001.570402299
[2025-11-24 02:45:38] 2025-11-24 01:45:05,969 | INFO     | intersect: -19547415769.777462
[2025-11-24 02:45:38] 2025-11-24 01:45:05,970 | INFO     | chi2: 3.6950045938501597
[2025-11-24 02:45:38] 2025-11-24 01:45:05,971 | INFO     | current chi2=3.6950045938501597 (change=2.032936088169304 %)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,971 | INFO     | left removable region: 20
[2025-11-24 02:45:38] 2025-11-24 01:45:05,972 | INFO     | sum of square deviations: 95365061994.98671
[2025-11-24 02:45:38] 2025-11-24 01:45:05,987 | INFO     | sum of deviations: 1408101192154.6384
[2025-11-24 02:45:38] 2025-11-24 01:45:05,987 | INFO     | mean x: 1763927434.9955556
[2025-11-24 02:45:38] 2025-11-24 01:45:05,987 | INFO     | mean y: 3652292.546666667
[2025-11-24 02:45:38] 2025-11-24 01:45:05,987 | INFO     | intersect: -26041403120.1168
[2025-11-24 02:45:38] 2025-11-24 01:45:05,988 | INFO     | chi2: 0.21743561736231323
[2025-11-24 02:45:38] 2025-11-24 01:45:05,989 | INFO     | current memory leak: 14.77 B/s (using 675 data points, chi2=0.22)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | could have reported an average CPU frequency of 2802 MHz (27 samples)
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | ..............................
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | . Timing measurements:
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | . get job = 0 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | . initial setup = 1 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,990 | INFO     | . payload setup = 8 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,991 | INFO     | . stage-in = 0 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,991 | INFO     | . payload execution = 43037 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,991 | INFO     | . stage-out = 2 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,991 | INFO     | . log creation = 0 s
[2025-11-24 02:45:38] 2025-11-24 01:45:05,991 | INFO     | ..............................
[2025-11-24 02:45:38] 2025-11-24 01:45:06,174 | INFO     | 
[2025-11-24 02:45:38] 2025-11-24 01:45:06,174 | INFO     | job summary report
[2025-11-24 02:45:38] 2025-11-24 01:45:06,174 | INFO     | --------------------------------------------------
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | PanDA job id: 6895335428
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | task id: 47556137
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | errors: (none)
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | pilot state: finished 
[2025-11-24 02:45:38] 2025-11-24 01:45:06,175 | INFO     | transexitcode: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | exeerrorcode: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | exeerrordiag: 
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | exitcode: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | exitmsg: OK
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | cpuconsumptiontime: 501712 s
[2025-11-24 02:45:38] 2025-11-24 01:45:06,176 | INFO     | nevents: 1000
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | neventsw: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | pid: 1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | pgrp: 1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | corecount: 12
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | event service: False
[2025-11-24 02:45:38] 2025-11-24 01:45:06,177 | INFO     | sizes: {0: 2298637, 1: 2298836, 6: 2299098, 12: 2299126, 43050: 2341869, 43053: 2350865, 43057: 2351049, 43062: 2351295}
[2025-11-24 02:45:38] 2025-11-24 01:45:06,178 | INFO     | --------------------------------------------------
[2025-11-24 02:45:38] 2025-11-24 01:45:06,178 | INFO     | 
[2025-11-24 02:45:38] 2025-11-24 01:45:06,178 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-11-24 02:45:38] 2025-11-24 01:45:06,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:45:38] 2025-11-24 01:45:06,203 | INFO     | job 6895335428 has completed (purged errors)
[2025-11-24 02:45:38] 2025-11-24 01:45:06,203 | INFO     | overall cleanup function is called
[2025-11-24 02:45:38] 2025-11-24 01:45:07,222 | INFO     | --- collectZombieJob: --- 10, [1009633]
[2025-11-24 02:45:38] 2025-11-24 01:45:07,223 | INFO     | zombie collector waiting for pid 1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:07,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:45:38] 2025-11-24 01:45:07,223 | INFO     | collected zombie processes
[2025-11-24 02:45:38] 2025-11-24 01:45:07,223 | INFO     | will attempt to kill all subprocesses of pid=1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:07,410 | INFO     | process IDs to be killed: [1009633] (in reverse order)
[2025-11-24 02:45:38] 2025-11-24 01:45:07,471 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:45:38] 2025-11-24 01:45:07,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:45:38] 2025-11-24 01:45:07,478 | INFO     | did not find any defunct processes belonging to 1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:07,485 | INFO     | did not find any defunct processes belonging to 1009633
[2025-11-24 02:45:38] 2025-11-24 01:45:07,486 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:45:38] 2025-11-24 01:45:07,486 | INFO     | ready for new job
[2025-11-24 02:45:38] 2025-11-24 01:45:07,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:45:38] 2025-11-24 01:45:07,490 | INFO     | ***************************************
[2025-11-24 02:45:38] 2025-11-24 01:45:07,490 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:45:38] 2025-11-24 01:45:07,490 | INFO     | ***************************************
[2025-11-24 02:45:38] 2025-11-24 01:45:07,490 | INFO     | 
[2025-11-24 02:45:38] 2025-11-24 01:45:07,492 | INFO     | architecture information:
[2025-11-24 02:45:38] 2025-11-24 01:45:07,492 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:45:38] 2025-11-24 01:45:07,505 | INFO     | cat /etc/os-release:
[2025-11-24 02:45:38] NAME="CentOS Linux"
[2025-11-24 02:45:38] VERSION="7 (Core)"
[2025-11-24 02:45:38] ID="centos"
[2025-11-24 02:45:38] ID_LIKE="rhel fedora"
[2025-11-24 02:45:38] VERSION_ID="7"
[2025-11-24 02:45:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:45:38] ANSI_COLOR="0;31"
[2025-11-24 02:45:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:45:38] HOME_URL="https://www.centos.org/"
[2025-11-24 02:45:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:45:38] 
[2025-11-24 02:45:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:45:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:45:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:45:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:45:38] 
[2025-11-24 02:45:38] 2025-11-24 01:45:07,506 | INFO     | ***************************************
[2025-11-24 02:45:38] 2025-11-24 01:45:08,009 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-11-24 02:45:38] 2025-11-24 01:45:08,027 | INFO     | sufficient remaining disk space (230048137216 B)
[2025-11-24 02:45:38] 2025-11-24 01:45:08,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:45:38] 2025-11-24 01:45:08,027 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:45:38] 2025-11-24 01:45:08,028 | INFO     | update_server=False
[2025-11-24 02:45:38] 2025-11-24 01:45:08,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:45:38] 2025-11-24 01:45:08,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:45:38] 2025-11-24 01:45:08,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:45:38] 2025-11-24 01:45:08,029 | INFO     | aborting loop
[2025-11-24 02:45:38] 2025-11-24 01:45:08,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:45:38] 2025-11-24 01:45:08,142 | INFO     | all payload control threads have been joined
[2025-11-24 02:45:38] 2025-11-24 01:45:08,528 | INFO     | all job control threads have been joined
[2025-11-24 02:45:38] 2025-11-24 01:45:08,804 | INFO     | all data control threads have been joined
[2025-11-24 02:45:38] 2025-11-24 01:45:09,029 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,034 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,035 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,148 | INFO     | [payload] control thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,210 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,442 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,472 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,533 | INFO     | [job] control thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,771 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,810 | INFO     | [data] control thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:09,852 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:10,038 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:10,059 | INFO     | [job] validate thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:10,070 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:10,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:11,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:45:38] 2025-11-24 01:45:15,313 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:45:38] 2025-11-24 01:45:18,922 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:45:38] 2025-11-24 01:45:19,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392076715840)>', '<ExcThread(monitor, started 140391407941376)>']
[2025-11-24 02:45:38] 2025-11-24 01:45:24,321 | INFO     | all workflow threads have been joined
[2025-11-24 02:45:38] 2025-11-24 01:45:24,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:45:38] 2025-11-24 01:45:24,322 | INFO     | traces error code: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:24,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:45:38] 2025-11-24 01:45:37,973 | INFO     | PID=1002083 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 02:45:38] 2025-11-24 01:45:37,974 | INFO     | .. there are 2 such processes running
[2025-11-24 02:45:38] 2025-11-24 01:45:37,975 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:45:38] 2025-11-24 01:45:37,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:45:38] 2025-11-24 01:45:37,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:45:38] 2025-11-24 01:45:37,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:45:38] 2025-11-24 01:45:37,976 | INFO     | [monitor] control thread has ended
[2025-11-24 02:45:38] 2025-11-24 01:45:38,096 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:45:38] 2025-11-24 01:45:38,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:45:38] 2025-11-24 01:45:38,101 [wrapper] pilotpid: 1002083
[2025-11-24 02:45:38] 2025-11-24 01:45:38,103 [wrapper] Pilot exit status: 0
[2025-11-24 02:45:38] 2025-11-24 01:45:38,113 [wrapper] pandaids: 6895335428
[2025-11-24 02:45:38] 2025-11-24 01:45:38,150 [wrapper] cleanup supervisor_pilot 1243396 1002084
[2025-11-24 02:45:38] 2025-11-24 01:45:38,153 [wrapper] Test setup, not cleaning
[2025-11-24 02:45:38] 2025-11-24 01:45:38,156 [wrapper] apfmon messages muted
[2025-11-24 02:45:38] 2025-11-24 01:45:38,159 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:45:38] 2025-11-24 01:45:38,161 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:45:38]  *** Error codes and diagnostics ***
[2025-11-24 02:45:38]     "exeErrorCode": 0,
[2025-11-24 02:45:38]     "exeErrorDiag": "",
[2025-11-24 02:45:38]     "pilotErrorCode": 0,
[2025-11-24 02:45:38]     "pilotErrorDiag": "",
[2025-11-24 02:45:38]  *** Listing of results directory ***
[2025-11-24 02:45:38] total 1315580
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc    576529 Nov 22 05:34 pilot3.tar.gz
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc      5112 Nov 22 05:40 queuedata.json
[2025-11-24 02:45:38] -rwx------ 1 boinc boinc     36292 Nov 22 05:41 runpilot2-wrapper.sh
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:45:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:46 run_atlas
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:46 job.xml
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc 411737588 Nov 23 14:46 EVNT.47483658._000255.pool.root.1
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:46 start_atlas.sh
[2025-11-24 02:45:38] drwxrwx--x 2 boinc boinc        68 Nov 23 14:46 shared
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc    590095 Nov 23 14:46 input.tar.gz
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc      6296 Nov 23 14:46 init_data.xml
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:46 boinc_lockfile
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc      2786 Nov 23 14:46 pandaJob.out
[2025-11-24 02:45:38] -rw------- 1 boinc boinc    989785 Nov 23 14:47 agis_schedconf.cvmfs.json
[2025-11-24 02:45:38] drwx------ 5 boinc boinc      4096 Nov 23 14:47 pilot3
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc       533 Nov 24 02:33 boinc_task_state.xml
[2025-11-24 02:45:38] -rw------- 1 boinc boinc 914739380 Nov 24 02:44 HITS.47556137._002512.pool.root.1
[2025-11-24 02:45:38] -rw------- 1 boinc boinc      1034 Nov 24 02:44 memory_monitor_summary.json
[2025-11-24 02:45:38] -rw------- 1 boinc boinc   1526164 Nov 24 02:44 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:45:38] -rw------- 1 boinc boinc   2409895 Nov 24 02:44 log.47556137._002512.job.log.tgz.1
[2025-11-24 02:45:38] -rw------- 1 boinc boinc      7937 Nov 24 02:45 heartbeat.json
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc      8192 Nov 24 02:45 boinc_mmap_file
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc        29 Nov 24 02:45 wrapper_checkpoint.txt
[2025-11-24 02:45:38] -rw------- 1 boinc boinc        95 Nov 24 02:45 pilot_heartbeat.json
[2025-11-24 02:45:38] -rw------- 1 boinc boinc       822 Nov 24 02:45 pilotlog.txt
[2025-11-24 02:45:38] -rw------- 1 boinc boinc   5977058 Nov 24 02:45 log.47556137._002512.job.log.1
[2025-11-24 02:45:38] -rw------- 1 boinc boinc       353 Nov 24 02:45 output.list
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc       620 Nov 24 02:45 runtime_log
[2025-11-24 02:45:38] -rw------- 1 boinc boinc   8407040 Nov 24 02:45 result.tar.gz
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc      8858 Nov 24 02:45 runtime_log.err
[2025-11-24 02:45:38] -rw------- 1 boinc boinc       665 Nov 24 02:45 dSeLDm8bug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4wHKDmfaGmXn.diag
[2025-11-24 02:45:38] -rw-r--r-- 1 boinc boinc     21441 Nov 24 02:45 stderr.txt
[2025-11-24 02:45:38] HITS file was successfully produced:
[2025-11-24 02:45:38] -rw------- 1 boinc boinc 914739380 Nov 24 02:44 shared/HITS.pool.root.1
[2025-11-24 02:45:38]  *** Contents of shared directory: ***
[2025-11-24 02:45:38] total 1304200
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc 411737588 Nov 23 14:46 ATLAS.root_0
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:46 start_atlas.sh
[2025-11-24 02:45:38] -rw-r--r-- 2 boinc boinc    590095 Nov 23 14:46 input.tar.gz
[2025-11-24 02:45:38] -rw------- 1 boinc boinc 914739380 Nov 24 02:44 HITS.pool.root.1
[2025-11-24 02:45:38] -rw------- 1 boinc boinc   8407040 Nov 24 02:45 result.tar.gz
02:45:40 (998217): run_atlas exited; CPU time 501876.467719
02:45:40 (998217): called boinc_finish(0)

</stderr_txt>
]]>

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