Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 21:54:05 (13752): vboxwrapper version 26210
2025-11-22 21:54:05 (13752): BOINC client version: 8.3.0
2025-11-22 21:54:05 (13752): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-22 21:54:05 (13752): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 21:54:05 (13752): Create VM. (boinc_0a823caafae6273c, slot#7)
2025-11-22 21:54:06 (13752): Setting Memory Size for VM. (4300MB)
2025-11-22 21:54:06 (13752): Setting CPU Count for VM. (3)
2025-11-22 21:54:06 (13752): Setting Chipset Options for VM.
2025-11-22 21:54:06 (13752): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 21:54:06 (13752): Setting Boot Options for VM.
2025-11-22 21:54:06 (13752): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 21:54:06 (13752): Enabling VM Network Access.
2025-11-22 21:54:06 (13752): Disabling USB Support for VM.
2025-11-22 21:54:06 (13752): Disabling COM Port Support for VM.
2025-11-22 21:54:06 (13752): Disabling LPT Port Support for VM.
2025-11-22 21:54:07 (13752): Disabling Audio Support for VM.
2025-11-22 21:54:07 (13752): Disabling Clipboard Support for VM.
2025-11-22 21:54:07 (13752): Disabling Drag and Drop Support for VM.
2025-11-22 21:54:07 (13752): Adding storage controller(s) to VM.
2025-11-22 21:54:07 (13752): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 21:54:07 (13752): Adding VirtualBox Guest Additions to VM.
2025-11-22 21:54:07 (13752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 21:54:07 (13752): forwarding host port 51767 to guest port 80
2025-11-22 21:54:07 (13752): Enabling remote desktop for VM.
2025-11-22 21:54:07 (13752): Enabling shared directory for VM.
2025-11-22 21:54:08 (13752): Starting VM using VBoxManage interface. (boinc_0a823caafae6273c, slot#7)
2025-11-22 21:54:09 (13752): Successfully started VM. (PID = '14189')
2025-11-22 21:54:09 (13752): Reporting VM Process ID to BOINC.
2025-11-22 21:54:09 (13752): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-22 21:54:09 (13752): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 21:54:09 (13752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 21:54:09 (13752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 21:54:09 (13752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 21:54:09 (13752): Detected: Web Application Enabled (http://localhost:51767)
2025-11-22 21:54:09 (13752): Detected: Remote Desktop Enabled (localhost:45337)
2025-11-22 21:54:09 (13752): Preference change detected
2025-11-22 21:54:09 (13752): Setting CPU throttle for VM. (100%)
2025-11-22 21:54:09 (13752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 21:54:11 (13752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 21:54:11 (13752): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 21:54:14 (13752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 21:54:14 (13752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 21:54:14 (13752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 21:54:24 (13752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 21:54:24 (13752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 21:55:10 (13752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000146 main     Log opened 2025-11-23T02:55:08.865186000Z
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000247 main     OS Product: Linux
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000272 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000308 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000309 main     Process ID: 1313
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.000309 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 21:55:10 (13752): Guest Log: 00:00:00.001207 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 21:55:11 (13752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 21:55:11 (13752): Guest Log: [INFO] Mounting shared directory
2025-11-22 21:55:11 (13752): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 21:55:24 (13752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 21:55:24 (13752): Guest Log: [INFO] Detected branch: prod
2025-11-22 21:55:24 (13752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 21:55:24 (13752): Guest Log: Copying input files
2025-11-22 21:55:28 (13752): Guest Log: Copied input files into RunAtlas.
2025-11-22 21:55:28 (13752): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 21:55:28 (13752): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 21:55:28 (13752): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 21:55:28 (13752): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 21:55:50 (13752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 21:55:50 (13752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 21:55:50 (13752): Guest Log: 2.6.3.0 1590 0 30184 153193 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 21:55:54 (13752): Guest Log: copied the webapp to /var/www
2025-11-22 21:55:55 (13752): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-22 21:55:55 (13752): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-22 21:55:55 (13752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 21:55:55 (13752): Guest Log:  *** Starting ATLAS job. (PandaID=6893860165 taskID=47523449) ***
2025-11-22 23:33:09 (13752): Status Report: Elapsed Time: '6000.000000'
2025-11-22 23:33:09 (13752): Status Report: CPU Time: '15876.970000'
2025-11-23 01:12:09 (13752): Status Report: Elapsed Time: '12000.000000'
2025-11-23 01:12:09 (13752): Status Report: CPU Time: '33628.100000'
2025-11-23 02:51:10 (13752): Status Report: Elapsed Time: '18000.000000'
2025-11-23 02:51:10 (13752): Status Report: CPU Time: '51402.070000'
2025-11-23 04:30:10 (13752): Status Report: Elapsed Time: '24000.000000'
2025-11-23 04:30:10 (13752): Status Report: CPU Time: '69191.820000'
2025-11-23 06:09:11 (13752): Status Report: Elapsed Time: '30000.000000'
2025-11-23 06:09:11 (13752): Status Report: CPU Time: '86992.440000'
2025-11-23 07:48:11 (13752): Status Report: Elapsed Time: '36000.000000'
2025-11-23 07:48:11 (13752): Status Report: CPU Time: '104797.630000'
2025-11-23 09:27:12 (13752): Status Report: Elapsed Time: '42000.000000'
2025-11-23 09:27:12 (13752): Status Report: CPU Time: '122598.960000'
2025-11-23 11:06:12 (13752): Status Report: Elapsed Time: '48000.000000'
2025-11-23 11:06:12 (13752): Status Report: CPU Time: '140408.330000'
2025-11-23 12:45:13 (13752): Status Report: Elapsed Time: '54000.000000'
2025-11-23 12:45:13 (13752): Status Report: CPU Time: '158220.080000'
2025-11-23 13:40:47 (13752): Guest Log:  *** Job finished ***
2025-11-23 13:40:47 (13752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:44,920 | INFO     | all workflow threads have been joined
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:44,920 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:44,920 | INFO     | traces error code: 0
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:44,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,646 | INFO     | PID=5989 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,647 | INFO     | found 0 job(s) in 20 queues
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,647 | INFO     | [monitor] control thread has ended
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,769 [wrapper] ==== pilot stdout END ====
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,773 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,777 [wrapper] pilotpid: 5989
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,780 [wrapper] Pilot exit status: 0
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,805 [wrapper] pandaids: 6893860165
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,826 [wrapper] cleanup supervisor_pilot 16085 5990
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,830 [wrapper] Test setup, not cleaning
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,834 [wrapper] apfmon messages muted
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,838 [wrapper] ==== wrapper stdout END ====
2025-11-23 13:40:47 (13752): Guest Log: 2025-11-23 18:40:46,842 [wrapper] ==== wrapper stderr END ====
2025-11-23 13:40:47 (13752): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 13:40:47 (13752): Guest Log:     "exeErrorCode": 0,
2025-11-23 13:40:47 (13752): Guest Log:     "exeErrorDiag": "",
2025-11-23 13:40:47 (13752): Guest Log:     "pilotErrorCode": 0,
2025-11-23 13:40:47 (13752): Guest Log:     "pilotErrorDiag": "",
2025-11-23 13:40:47 (13752): Guest Log:  *** Listing of results directory ***
2025-11-23 13:40:47 (13752): Guest Log: total 912460
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 13:12 pilot3.tar.gz
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 13:39 queuedata.json
2025-11-23 13:40:47 (13752): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 13:40 runpilot2-wrapper.sh
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 23 02:55 start_atlas.sh
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas      9455 Nov 23 02:55 init_data.xml
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas    590100 Nov 23 02:55 input.tar.gz
2025-11-23 13:40:47 (13752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 02:55 EVNT.47493127._000546.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 23 02:55 pandaJob.out
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 02:57 agis_schedconf.cvmfs.json
2025-11-23 13:40:47 (13752): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 02:57 pilot3
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas 912889659 Nov 23 18:39 HITS.47523449._005457.pool.root.1
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas      1037 Nov 23 18:39 memory_monitor_summary.json
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 18:39 agis_ddmendpoints.agis.ALL.json
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas   1493027 Nov 23 18:39 log.47523449._005457.job.log.tgz.1
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas      8669 Nov 23 18:40 heartbeat.json
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas       744 Nov 23 18:40 pilotlog.txt
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 18:40 pilot_heartbeat.json
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas   7315627 Nov 23 18:40 log.47523449._005457.job.log.1
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 18:40 output.list
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 18:40 runtime_log
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas   8826880 Nov 23 18:40 result.tar.gz
2025-11-23 13:40:47 (13752): Guest Log: -rw-r--r--. 1 atlas atlas      8756 Nov 23 18:40 runtime_log.err
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas       665 Nov 23 18:40 gEJKDmR4Jg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmyHKDmnVWUjm.diag
2025-11-23 13:40:47 (13752): Guest Log: Looking for outputfile HITS.47523449._005457.pool.root.1
2025-11-23 13:40:47 (13752): Guest Log: HITS file was successfully produced
2025-11-23 13:40:47 (13752): Guest Log: -rw-------. 1 atlas atlas 912889659 Nov 23 18:39 /home/atlas/RunAtlas/HITS.47523449._005457.pool.root.1
2025-11-23 13:40:48 (13752): Guest Log: Successfully finished the ATLAS job!
2025-11-23 13:40:48 (13752): Guest Log: Copying the results back to the shared directory!
2025-11-23 13:40:48 (13752): Guest Log:  *** Contents of shared directory: ***
2025-11-23 13:40:48 (13752): Guest Log: total 409432
2025-11-23 13:40:48 (13752): Guest Log: -rw-r--r--. 1 root root 409801138 Nov 23 02:54 ATLAS.root_0
2025-11-23 13:40:48 (13752): Guest Log: -rw-r--r--. 1 root root      9455 Nov 23 02:54 init_data.xml
2025-11-23 13:40:48 (13752): Guest Log: -rw-r--r--. 1 root root    590100 Nov 23 02:54 input.tar.gz
2025-11-23 13:40:48 (13752): Guest Log: -rw-r--r--. 1 root root   8826880 Nov 23 18:40 result.tar.gz
2025-11-23 13:40:48 (13752): Guest Log: -rw-r--r--. 1 root root     15847 Nov 23 02:54 start_atlas.sh
2025-11-23 13:40:48 (13752): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 13:40:48 (13752): VM Completion File Detected.
2025-11-23 13:40:48 (13752): Powering off VM.
2025-11-23 13:40:49 (13752): Successfully stopped VM.
2025-11-23 13:40:49 (13752): Deregistering VM. (boinc_0a823caafae6273c, slot#7)
2025-11-23 13:40:49 (13752): Removing network bandwidth throttle group from VM.
2025-11-23 13:40:49 (13752): Removing VM from VirtualBox.
2025-11-23 13:40:54 (13752): called boinc_finish(0)

</stderr_txt>
]]>

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