Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 21:54:11 (11321): vboxwrapper version 26210
2025-11-22 21:54:11 (11321): BOINC client version: 8.3.0
2025-11-22 21:54:11 (11321): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-22 21:54:11 (11321): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 21:54:11 (11321): Create VM. (boinc_4b59bc6534ed7b3d, slot#11)
2025-11-22 21:54:11 (11321): Setting Memory Size for VM. (4300MB)
2025-11-22 21:54:11 (11321): Setting CPU Count for VM. (3)
2025-11-22 21:54:12 (11321): Setting Chipset Options for VM.
2025-11-22 21:54:12 (11321): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 21:54:12 (11321): Setting Boot Options for VM.
2025-11-22 21:54:12 (11321): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 21:54:12 (11321): Enabling VM Network Access.
2025-11-22 21:54:12 (11321): Disabling USB Support for VM.
2025-11-22 21:54:12 (11321): Disabling COM Port Support for VM.
2025-11-22 21:54:12 (11321): Disabling LPT Port Support for VM.
2025-11-22 21:54:13 (11321): Disabling Audio Support for VM.
2025-11-22 21:54:13 (11321): Disabling Clipboard Support for VM.
2025-11-22 21:54:13 (11321): Disabling Drag and Drop Support for VM.
2025-11-22 21:54:13 (11321): Adding storage controller(s) to VM.
2025-11-22 21:54:13 (11321): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 21:54:13 (11321): Adding VirtualBox Guest Additions to VM.
2025-11-22 21:54:14 (11321): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 21:54:14 (11321): forwarding host port 53171 to guest port 80
2025-11-22 21:54:14 (11321): Enabling remote desktop for VM.
2025-11-22 21:54:14 (11321): Enabling shared directory for VM.
2025-11-22 21:54:14 (11321): Starting VM using VBoxManage interface. (boinc_4b59bc6534ed7b3d, slot#11)
2025-11-22 21:54:15 (11321): Successfully started VM. (PID = '11760')
2025-11-22 21:54:15 (11321): Reporting VM Process ID to BOINC.
2025-11-22 21:54:15 (11321): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-22 21:54:15 (11321): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 21:54:15 (11321): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 21:54:15 (11321): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 21:54:15 (11321): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 21:54:15 (11321): Detected: Web Application Enabled (http://localhost:53171)
2025-11-22 21:54:15 (11321): Detected: Remote Desktop Enabled (localhost:46319)
2025-11-22 21:54:15 (11321): Preference change detected
2025-11-22 21:54:15 (11321): Setting CPU throttle for VM. (100%)
2025-11-22 21:54:16 (11321): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 21:54:17 (11321): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 21:54:17 (11321): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 21:54:21 (11321): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 21:54:21 (11321): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 21:54:21 (11321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 21:54:35 (11321): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 21:54:35 (11321): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 21:55:33 (11321): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000170 main     Log opened 2025-11-23T02:55:31.289110000Z
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000292 main     OS Product: Linux
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000323 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000340 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000357 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000357 main     Process ID: 1312
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000357 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 21:55:33 (11321): Guest Log: 00:00:00.000877 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 21:55:34 (11321): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 21:55:34 (11321): Guest Log: [INFO] Mounting shared directory
2025-11-22 21:55:34 (11321): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 21:55:51 (11321): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 21:55:51 (11321): Guest Log: [INFO] Detected branch: prod
2025-11-22 21:55:52 (11321): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 21:55:52 (11321): Guest Log: Copying input files
2025-11-22 21:56:23 (11321): Guest Log: Copied input files into RunAtlas.
2025-11-22 21:56:23 (11321): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 21:56:23 (11321): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 21:56:23 (11321): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 21:56:23 (11321): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 21:56:45 (11321): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 21:56:45 (11321): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 21:56:45 (11321): Guest Log: 2.6.3.0 1590 1 32208 153193 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 21:56:51 (11321): Guest Log: copied the webapp to /var/www
2025-11-22 21:56:51 (11321): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-22 21:56:51 (11321): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-22 21:56:51 (11321): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 21:56:51 (11321): Guest Log:  *** Starting ATLAS job. (PandaID=6895328650 taskID=47556149) ***
2025-11-22 23:33:16 (11321): Status Report: Elapsed Time: '6000.000000'
2025-11-22 23:33:16 (11321): Status Report: CPU Time: '16154.790000'
2025-11-23 01:12:16 (11321): Status Report: Elapsed Time: '12000.000000'
2025-11-23 01:12:16 (11321): Status Report: CPU Time: '33954.770000'
2025-11-23 02:51:17 (11321): Status Report: Elapsed Time: '18000.000000'
2025-11-23 02:51:17 (11321): Status Report: CPU Time: '51752.240000'
2025-11-23 04:30:17 (11321): Status Report: Elapsed Time: '24000.000000'
2025-11-23 04:30:17 (11321): Status Report: CPU Time: '69562.690000'
2025-11-23 06:09:18 (11321): Status Report: Elapsed Time: '30000.000000'
2025-11-23 06:09:18 (11321): Status Report: CPU Time: '87378.270000'
2025-11-23 07:48:18 (11321): Status Report: Elapsed Time: '36000.000000'
2025-11-23 07:48:18 (11321): Status Report: CPU Time: '105191.820000'
2025-11-23 09:27:19 (11321): Status Report: Elapsed Time: '42000.000000'
2025-11-23 09:27:19 (11321): Status Report: CPU Time: '123006.030000'
2025-11-23 10:58:20 (11321): Guest Log:  *** Job finished ***
2025-11-23 10:58:20 (11321): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:09,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:09,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:11,416 | INFO     | [monitor] cgroup control has ended
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:12,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005022316352)>', '<ExcThread(monitor, started 140004441446144)>']
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:12,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:12,637 | INFO     | [monitor] control thread has ended
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,423 | INFO     | all workflow threads have been joined
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,424 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,424 | INFO     | traces error code: 0
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,649 [wrapper] ==== pilot stdout END ====
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,656 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,662 [wrapper] pilotpid: 5990
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,669 [wrapper] Pilot exit status: 0
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,723 [wrapper] pandaids: 6895328650
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,756 [wrapper] cleanup supervisor_pilot 30897 5991
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,769 [wrapper] Test setup, not cleaning
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,776 [wrapper] apfmon messages muted
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,783 [wrapper] ==== wrapper stdout END ====
2025-11-23 10:58:20 (11321): Guest Log: 2025-11-23 15:58:17,789 [wrapper] ==== wrapper stderr END ====
2025-11-23 10:58:20 (11321): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 10:58:20 (11321): Guest Log:     "exeErrorCode": 0,
2025-11-23 10:58:20 (11321): Guest Log:     "exeErrorDiag": "",
2025-11-23 10:58:20 (11321): Guest Log:     "pilotErrorCode": 0,
2025-11-23 10:58:20 (11321): Guest Log:     "pilotErrorDiag": "",
2025-11-23 10:58:20 (11321): Guest Log:  *** Listing of results directory ***
2025-11-23 10:58:20 (11321): Guest Log: total 916284
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 17:05 pilot3.tar.gz
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 17:36 queuedata.json
2025-11-23 10:58:20 (11321): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 17:38 runpilot2-wrapper.sh
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas      9166 Nov 23 02:55 init_data.xml
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas    590104 Nov 23 02:55 input.tar.gz
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 23 02:55 start_atlas.sh
2025-11-23 10:58:20 (11321): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 02:56 EVNT.47483658._001030.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 23 02:56 pandaJob.out
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 02:58 agis_schedconf.cvmfs.json
2025-11-23 10:58:20 (11321): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 02:58 pilot3
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas 919655086 Nov 23 15:56 HITS.47556149._000164.pool.root.1
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 23 15:56 memory_monitor_summary.json
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 15:57 agis_ddmendpoints.agis.ALL.json
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas   1380565 Nov 23 15:57 log.47556149._000164.job.log.tgz.1
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas      8662 Nov 23 15:57 heartbeat.json
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 15:58 pilot_heartbeat.json
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 23 15:58 pilotlog.txt
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas   5999076 Nov 23 15:58 log.47556149._000164.job.log.1
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 15:58 output.list
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 15:58 runtime_log
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas   7403520 Nov 23 15:58 result.tar.gz
2025-11-23 10:58:20 (11321): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Nov 23 15:58 runtime_log.err
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas       667 Nov 23 15:58 HbYLDmnGkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBbJKDmB8qDTo.diag
2025-11-23 10:58:20 (11321): Guest Log: Looking for outputfile HITS.47556149._000164.pool.root.1
2025-11-23 10:58:20 (11321): Guest Log: HITS file was successfully produced
2025-11-23 10:58:20 (11321): Guest Log: -rw-------. 1 atlas atlas 919655086 Nov 23 15:56 /home/atlas/RunAtlas/HITS.47556149._000164.pool.root.1
2025-11-23 10:58:20 (11321): Guest Log: Successfully finished the ATLAS job!
2025-11-23 10:58:20 (11321): Guest Log: Copying the results back to the shared directory!
2025-11-23 10:58:21 (11321): Guest Log:  *** Contents of shared directory: ***
2025-11-23 10:58:21 (11321): Guest Log: total 409268
2025-11-23 10:58:21 (11321): Guest Log: -rw-r--r--. 1 root root 411056985 Nov 23 02:54 ATLAS.root_0
2025-11-23 10:58:21 (11321): Guest Log: -rw-r--r--. 1 root root      9166 Nov 23 02:54 init_data.xml
2025-11-23 10:58:21 (11321): Guest Log: -rw-r--r--. 1 root root    590104 Nov 23 02:54 input.tar.gz
2025-11-23 10:58:21 (11321): Guest Log: -rw-r--r--. 1 root root   7403520 Nov 23 15:58 result.tar.gz
2025-11-23 10:58:21 (11321): Guest Log: -rw-r--r--. 1 root root     15847 Nov 23 02:54 start_atlas.sh
2025-11-23 10:58:21 (11321): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 10:58:21 (11321): VM Completion File Detected.
2025-11-23 10:58:21 (11321): Powering off VM.
2025-11-23 10:58:21 (11321): Successfully stopped VM.
2025-11-23 10:58:21 (11321): Deregistering VM. (boinc_4b59bc6534ed7b3d, slot#11)
2025-11-23 10:58:21 (11321): Removing network bandwidth throttle group from VM.
2025-11-23 10:58:22 (11321): Removing VM from VirtualBox.
2025-11-23 10:58:27 (11321): called boinc_finish(0)

</stderr_txt>
]]>

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