Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 22:12:53 (32081): vboxwrapper version 26210
2025-11-22 22:12:53 (32081): BOINC client version: 8.3.0
2025-11-22 22:12:53 (32081): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-22 22:12:53 (32081): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 22:12:53 (32081): Create VM. (boinc_f77ce5cb97425830, slot#6)
2025-11-22 22:12:53 (32081): Setting Memory Size for VM. (4300MB)
2025-11-22 22:12:53 (32081): Setting CPU Count for VM. (3)
2025-11-22 22:12:53 (32081): Setting Chipset Options for VM.
2025-11-22 22:12:53 (32081): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 22:12:53 (32081): Setting Boot Options for VM.
2025-11-22 22:12:53 (32081): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 22:12:54 (32081): Enabling VM Network Access.
2025-11-22 22:12:54 (32081): Disabling USB Support for VM.
2025-11-22 22:12:54 (32081): Disabling COM Port Support for VM.
2025-11-22 22:12:54 (32081): Disabling LPT Port Support for VM.
2025-11-22 22:12:54 (32081): Disabling Audio Support for VM.
2025-11-22 22:12:54 (32081): Disabling Clipboard Support for VM.
2025-11-22 22:12:54 (32081): Disabling Drag and Drop Support for VM.
2025-11-22 22:12:54 (32081): Adding storage controller(s) to VM.
2025-11-22 22:12:54 (32081): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 22:12:54 (32081): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 22:12:54 (32081): forwarding host port 56467 to guest port 80
2025-11-22 22:12:54 (32081): Enabling remote desktop for VM.
2025-11-22 22:12:55 (32081): Enabling shared directory for VM.
2025-11-22 22:12:55 (32081): Starting VM using VBoxManage interface. (boinc_f77ce5cb97425830, slot#6)
2025-11-22 22:12:56 (32081): Successfully started VM. (PID = '32592')
2025-11-22 22:12:56 (32081): Reporting VM Process ID to BOINC.
2025-11-22 22:12:56 (32081): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-22 22:12:56 (32081): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 22:12:56 (32081): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 22:12:56 (32081): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 22:12:56 (32081): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 22:12:56 (32081): Detected: Web Application Enabled (http://localhost:56467)
2025-11-22 22:12:56 (32081): Detected: Remote Desktop Enabled (localhost:40519)
2025-11-22 22:12:56 (32081): Preference change detected
2025-11-22 22:12:56 (32081): Setting CPU throttle for VM. (100%)
2025-11-22 22:12:56 (32081): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 22:12:58 (32081): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 22:12:58 (32081): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 22:13:01 (32081): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 22:13:01 (32081): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 22:13:01 (32081): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 22:13:06 (32081): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 22:13:06 (32081): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 22:13:11 (32081): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000154 main     Log opened 2025-11-23T03:13:09.852832000Z
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000255 main     OS Product: Linux
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000286 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000312 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000335 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000335 main     Process ID: 1280
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.000336 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 22:13:11 (32081): Guest Log: 00:00:00.004903 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 22:13:11 (32081): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 22:13:11 (32081): Guest Log: [INFO] Mounting shared directory
2025-11-22 22:13:11 (32081): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 22:13:27 (32081): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 22:13:27 (32081): Guest Log: [INFO] Detected branch: prod
2025-11-22 22:13:27 (32081): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 22:13:27 (32081): Guest Log: Copying input files
2025-11-22 22:13:29 (32081): Guest Log: Copied input files into RunAtlas.
2025-11-22 22:13:29 (32081): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 22:13:29 (32081): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 22:13:29 (32081): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 22:13:29 (32081): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 22:13:59 (32081): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 22:13:59 (32081): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 22:13:59 (32081): Guest Log: 2.6.3.0 1558 0 30136 153195 2 1 3117639 4096000 0 65024 1 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 22:14:00 (32081): Guest Log: copied the webapp to /var/www
2025-11-22 22:14:00 (32081): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-22 22:14:00 (32081): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-22 22:14:00 (32081): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 22:14:00 (32081): Guest Log:  *** Starting ATLAS job. (PandaID=6895335207 taskID=47556137) ***
2025-11-22 23:51:56 (32081): Status Report: Elapsed Time: '6000.000000'
2025-11-22 23:51:56 (32081): Status Report: CPU Time: '16473.350000'
2025-11-23 01:30:57 (32081): Status Report: Elapsed Time: '12000.000000'
2025-11-23 01:30:57 (32081): Status Report: CPU Time: '34204.550000'
2025-11-23 03:09:57 (32081): Status Report: Elapsed Time: '18000.000000'
2025-11-23 03:09:57 (32081): Status Report: CPU Time: '51946.580000'
2025-11-23 04:48:58 (32081): Status Report: Elapsed Time: '24000.000000'
2025-11-23 04:48:58 (32081): Status Report: CPU Time: '69697.330000'
2025-11-23 06:27:58 (32081): Status Report: Elapsed Time: '30000.000000'
2025-11-23 06:27:58 (32081): Status Report: CPU Time: '87450.770000'
2025-11-23 08:06:58 (32081): Status Report: Elapsed Time: '36000.000000'
2025-11-23 08:06:58 (32081): Status Report: CPU Time: '105202.220000'
2025-11-23 09:45:59 (32081): Status Report: Elapsed Time: '42000.000000'
2025-11-23 09:45:59 (32081): Status Report: CPU Time: '122949.630000'
2025-11-23 11:24:59 (32081): Status Report: Elapsed Time: '48000.000000'
2025-11-23 11:24:59 (32081): Status Report: CPU Time: '140696.120000'
2025-11-23 12:02:26 (32081): Guest Log:  *** Job finished ***
2025-11-23 12:02:26 (32081): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:09,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:09,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:17,979 | INFO     | [monitor] cgroup control has ended
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:20,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217835169600)>', '<ExcThread(monitor, started 140217616627456)>']
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:20,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:20,218 | INFO     | [monitor] control thread has ended
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,061 | INFO     | all workflow threads have been joined
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,061 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,061 | INFO     | traces error code: 0
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,125 [wrapper] ==== pilot stdout END ====
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,129 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,134 [wrapper] pilotpid: 5949
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,138 [wrapper] Pilot exit status: 0
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,157 [wrapper] pandaids: 6895335207
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,183 [wrapper] cleanup supervisor_pilot  6645 5950
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,190 [wrapper] Test setup, not cleaning
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,194 [wrapper] apfmon messages muted
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,198 [wrapper] ==== wrapper stdout END ====
2025-11-23 12:02:26 (32081): Guest Log: 2025-11-23 17:02:25,202 [wrapper] ==== wrapper stderr END ====
2025-11-23 12:02:26 (32081): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 12:02:26 (32081): Guest Log:     "exeErrorCode": 0,
2025-11-23 12:02:26 (32081): Guest Log:     "exeErrorDiag": "",
2025-11-23 12:02:26 (32081): Guest Log:     "pilotErrorCode": 0,
2025-11-23 12:02:26 (32081): Guest Log:     "pilotErrorDiag": "",
2025-11-23 12:02:26 (32081): Guest Log:  *** Listing of results directory ***
2025-11-23 12:02:26 (32081): Guest Log: total 918548
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 04:34 pilot3.tar.gz
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 04:37 queuedata.json
2025-11-23 12:02:26 (32081): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 04:38 runpilot2-wrapper.sh
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas    590107 Nov 23 03:13 input.tar.gz
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 23 03:13 start_atlas.sh
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas      9576 Nov 23 03:13 init_data.xml
2025-11-23 12:02:26 (32081): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 03:13 EVNT.47483658._000254.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 23 03:13 pandaJob.out
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 03:15 agis_schedconf.cvmfs.json
2025-11-23 12:02:26 (32081): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 03:15 pilot3
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas 921047562 Nov 23 17:01 HITS.47556137._002508.pool.root.1
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 23 17:01 memory_monitor_summary.json
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 17:01 agis_ddmendpoints.agis.ALL.json
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas   1420366 Nov 23 17:01 log.47556137._002508.job.log.tgz.1
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas      8658 Nov 23 17:01 heartbeat.json
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 17:02 pilot_heartbeat.json
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 23 17:02 pilotlog.txt
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas   6429158 Nov 23 17:02 log.47556137._002508.job.log.1
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 17:02 output.list
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 17:02 runtime_log
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas   7864320 Nov 23 17:02 result.tar.gz
2025-11-23 12:02:26 (32081): Guest Log: -rw-r--r--. 1 atlas atlas      8741 Nov 23 17:02 runtime_log.err
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas       660 Nov 23 17:02 k0cMDmAZug8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzwHKDmBZ8fnm.diag
2025-11-23 12:02:26 (32081): Guest Log: Looking for outputfile HITS.47556137._002508.pool.root.1
2025-11-23 12:02:26 (32081): Guest Log: HITS file was successfully produced
2025-11-23 12:02:26 (32081): Guest Log: -rw-------. 1 atlas atlas 921047562 Nov 23 17:01 /home/atlas/RunAtlas/HITS.47556137._002508.pool.root.1
2025-11-23 12:02:26 (32081): Guest Log: Successfully finished the ATLAS job!
2025-11-23 12:02:26 (32081): Guest Log: Copying the results back to the shared directory!
2025-11-23 12:02:27 (32081): Guest Log:  *** Contents of shared directory: ***
2025-11-23 12:02:27 (32081): Guest Log: total 408840
2025-11-23 12:02:27 (32081): Guest Log: -rw-r--r--. 1 root root 410163575 Nov 23 03:12 ATLAS.root_0
2025-11-23 12:02:27 (32081): Guest Log: -rw-r--r--. 1 root root      9576 Nov 23 03:12 init_data.xml
2025-11-23 12:02:27 (32081): Guest Log: -rw-r--r--. 1 root root    590107 Nov 23 03:12 input.tar.gz
2025-11-23 12:02:27 (32081): Guest Log: -rw-r--r--. 1 root root   7864320 Nov 23 17:02 result.tar.gz
2025-11-23 12:02:27 (32081): Guest Log: -rw-r--r--. 1 root root     15847 Nov 23 03:12 start_atlas.sh
2025-11-23 12:02:27 (32081): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 12:02:27 (32081): VM Completion File Detected.
2025-11-23 12:02:27 (32081): Powering off VM.
2025-11-23 12:02:27 (32081): Successfully stopped VM.
2025-11-23 12:02:27 (32081): Deregistering VM. (boinc_f77ce5cb97425830, slot#6)
2025-11-23 12:02:27 (32081): Removing network bandwidth throttle group from VM.
2025-11-23 12:02:28 (32081): Removing VM from VirtualBox.
2025-11-23 12:02:33 (32081): called boinc_finish(0)

</stderr_txt>
]]>

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