Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:40 (3257933): wrapper (7.7.26015): starting
23:39:40 (3257933): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:39:40] Arguments: --nthreads 8
[2025-11-22 23:39:40] Threads: 8
[2025-11-22 23:39:40] Checking for CVMFS
[2025-11-22 23:39:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:39:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:39:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:39:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:39:42] 2.13.2.0 5670 28118 156416 153197 0 341 28242661 40960000 9528 16776704 0 22082136 99.749 11613975 28947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:39:42] CVMFS is ok
[2025-11-22 23:39:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:39:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:39:42] Further information can be found at the LHC@home message board.
[2025-11-22 23:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:39:42] Checking for apptainer binary...
[2025-11-22 23:39:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:39:42] Running /usr/bin/apptainer --version
[2025-11-22 23:39:42] apptainer version 1.4.4-1.el9
[2025-11-22 23:39:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:39:43] c-211-8.aglt2.org
[2025-11-22 23:39:43] apptainer works
[2025-11-22 23:39:43] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:39:43] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:39:43] Starting ATLAS job with PandaID=6895328345
[2025-11-22 23:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:10:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:10:19] 2025-11-25 04:09:18,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:10:19] 2025-11-25 04:09:19,317 | INFO     | PID=3262953 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 23:10:19] 2025-11-25 04:09:19,317 | INFO     | .. there are 9 such processes running
[2025-11-24 23:10:19] 2025-11-25 04:09:20,318 | INFO     | time since job start (170932s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:21,399 | INFO     | monitor loop #9110: job 0:6895328345 is in state 'finished'
[2025-11-24 23:10:19] 2025-11-25 04:09:21,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:10:19] 2025-11-25 04:09:22,328 | INFO     | time since job start (170934s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:23,909 | INFO     | monitor loop #9111: job 0:6895328345 is in state 'finished'
[2025-11-24 23:10:19] 2025-11-25 04:09:23,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:10:19] 2025-11-25 04:09:24,337 | INFO     | time since job start (170936s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:26,344 | INFO     | time since job start (170938s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:26,422 | INFO     | monitor loop #9112: job 0:6895328345 is in state 'finished'
[2025-11-24 23:10:19] 2025-11-25 04:09:26,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:10:19] 2025-11-25 04:09:27,269 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:10:19] 2025-11-25 04:09:27,287 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2617.7131041666676
[2025-11-24 23:10:19] 2025-11-25 04:09:27,299 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895328345/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:10:19] 2025-11-25 04:09:27,300 | INFO     | extracted standard info from prmon json
[2025-11-24 23:10:19] 2025-11-25 04:09:27,300 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:10:19] 2025-11-25 04:09:27,301 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:10:19] 2025-11-25 04:09:27,386 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:10:19] 2025-11-25 04:09:27,390 | INFO     | sum of square deviations: 6814849460427.976
[2025-11-24 23:10:19] 2025-11-25 04:09:27,891 | INFO     | sum of deviations: 22555179631041.438
[2025-11-24 23:10:19] 2025-11-25 04:09:27,891 | INFO     | mean x: 1763958318.0681899
[2025-11-24 23:10:19] 2025-11-25 04:09:27,891 | INFO     | mean y: 2901336.9403784364
[2025-11-24 23:10:19] 2025-11-25 04:09:27,892 | INFO     | intersect: -5835290241.131421
[2025-11-24 23:10:19] 2025-11-25 04:09:27,908 | INFO     | chi2: 18.439837160080074
[2025-11-24 23:10:19] 2025-11-25 04:09:27,924 | INFO     | sum of square deviations: 6778429604691.921
[2025-11-24 23:10:19] 2025-11-25 04:09:28,436 | INFO     | time since job start (170940s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:28,597 | INFO     | sum of deviations: 23530292804286.56
[2025-11-24 23:10:19] 2025-11-25 04:09:28,597 | INFO     | mean x: 1763958165.582618
[2025-11-24 23:10:19] 2025-11-25 04:09:28,598 | INFO     | mean y: 2905419.110157368
[2025-11-24 23:10:19] 2025-11-25 04:09:28,598 | INFO     | intersect: -6120408467.920711
[2025-11-24 23:10:19] 2025-11-25 04:09:28,606 | INFO     | chi2: 15.076724110798533
[2025-11-24 23:10:19] 2025-11-25 04:09:28,606 | INFO     | current chi2=15.076724110798533 (change=18.23830123924444 %)
[2025-11-24 23:10:19] 2025-11-25 04:09:28,606 | INFO     | right removable region: 2795
[2025-11-24 23:10:19] 2025-11-25 04:09:28,619 | INFO     | sum of square deviations: 6778415819301.918
[2025-11-24 23:10:19] 2025-11-25 04:09:28,951 | INFO     | monitor loop #9113: job 0:6895328345 is in state 'finished'
[2025-11-24 23:10:19] 2025-11-25 04:09:28,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:10:19] 2025-11-25 04:09:29,040 | INFO     | sum of deviations: 21471935827669.88
[2025-11-24 23:10:19] 2025-11-25 04:09:29,040 | INFO     | mean x: 1763958470.582618
[2025-11-24 23:10:19] 2025-11-25 04:09:29,041 | INFO     | mean y: 2905871.2689556507
[2025-11-24 23:10:19] 2025-11-25 04:09:29,041 | INFO     | intersect: -5584771853.54276
[2025-11-24 23:10:19] 2025-11-25 04:09:29,049 | INFO     | chi2: 14.684152265185544
[2025-11-24 23:10:19] 2025-11-25 04:09:29,049 | INFO     | current chi2=14.684152265185544 (change=20.367234603487255 %)
[2025-11-24 23:10:19] 2025-11-25 04:09:29,049 | INFO     | left removable region: 10
[2025-11-24 23:10:19] 2025-11-25 04:09:29,057 | INFO     | sum of square deviations: 6698735796144.451
[2025-11-24 23:10:19] 2025-11-25 04:09:30,189 | INFO     | sum of deviations: 21712854034091.562
[2025-11-24 23:10:19] 2025-11-25 04:09:30,194 | INFO     | mean x: 1763958440.1145422
[2025-11-24 23:10:19] 2025-11-25 04:09:30,194 | INFO     | mean y: 2914523.4685816877
[2025-11-24 23:10:19] 2025-11-25 04:09:30,194 | INFO     | intersect: -5714667614.112558
[2025-11-24 23:10:19] 2025-11-25 04:09:30,202 | INFO     | chi2: 8.266808791264507
[2025-11-24 23:10:19] 2025-11-25 04:09:30,203 | INFO     | current memory leak: 3.24 B/s (using 2785 data points, chi2=8.27)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,210 | INFO     | could have reported an average CPU frequency of 2536 MHz (95 samples)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,210 | INFO     | ..............................
[2025-11-24 23:10:19] 2025-11-25 04:09:30,210 | INFO     | . Timing measurements:
[2025-11-24 23:10:19] 2025-11-25 04:09:30,210 | INFO     | . get job = 0 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,210 | INFO     | . initial setup = 4 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | . payload setup = 27 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | . stage-in = 0 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | . payload execution = 170831 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | . stage-out = 16 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | . log creation = 3 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,211 | INFO     | ..............................
[2025-11-24 23:10:19] 2025-11-25 04:09:30,511 | INFO     | time since job start (170942s) is within the limit (172800.0s)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,627 | INFO     | 
[2025-11-24 23:10:19] 2025-11-25 04:09:30,627 | INFO     | job summary report
[2025-11-24 23:10:19] 2025-11-25 04:09:30,627 | INFO     | --------------------------------------------------
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | PanDA job id: 6895328345
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | task id: 47556137
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | errors: (none)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | pilot state: finished 
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | transexitcode: 0
[2025-11-24 23:10:19] 2025-11-25 04:09:30,628 | INFO     | exeerrorcode: 0
[2025-11-24 23:10:19] 2025-11-25 04:09:30,629 | INFO     | exeerrordiag: 
[2025-11-24 23:10:19] 2025-11-25 04:09:30,632 | INFO     | exitcode: 0
[2025-11-24 23:10:19] 2025-11-25 04:09:30,632 | INFO     | exitmsg: OK
[2025-11-24 23:10:19] 2025-11-25 04:09:30,632 | INFO     | cpuconsumptiontime: 363940 s
[2025-11-24 23:10:19] 2025-11-25 04:09:30,632 | INFO     | nevents: 1000
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | neventsw: 0
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | pid: 3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | pgrp: 3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | corecount: 8
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | event service: False
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | sizes: {0: 2298576, 1: 2298660, 2: 2298831, 12: 2298859, 23: 2299177, 170863: 2401685, 170865: 2401812, 170883: 2411653, 170885: 2411709, 170900: 2411955}
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | --------------------------------------------------
[2025-11-24 23:10:19] 2025-11-25 04:09:30,633 | INFO     | 
[2025-11-24 23:10:19] 2025-11-25 04:09:30,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 23:10:19] 2025-11-25 04:09:30,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:10:19] 2025-11-25 04:09:30,690 | INFO     | job 6895328345 has completed (purged errors)
[2025-11-24 23:10:19] 2025-11-25 04:09:30,694 | INFO     | overall cleanup function is called
[2025-11-24 23:10:19] 2025-11-25 04:09:31,725 | INFO     | --- collectZombieJob: --- 10, [3270803]
[2025-11-24 23:10:19] 2025-11-25 04:09:31,725 | INFO     | zombie collector waiting for pid 3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:31,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:10:19] 2025-11-25 04:09:31,726 | INFO     | collected zombie processes
[2025-11-24 23:10:19] 2025-11-25 04:09:31,726 | INFO     | will attempt to kill all subprocesses of pid=3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:33,875 | INFO     | process IDs to be killed: [3270803] (in reverse order)
[2025-11-24 23:10:19] 2025-11-25 04:09:34,022 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:10:19] 2025-11-25 04:09:34,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:10:19] 2025-11-25 04:09:34,042 | INFO     | did not find any defunct processes belonging to 3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:34,054 | INFO     | did not find any defunct processes belonging to 3270803
[2025-11-24 23:10:19] 2025-11-25 04:09:34,056 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:10:19] 2025-11-25 04:09:34,056 | INFO     | ready for new job
[2025-11-24 23:10:19] 2025-11-25 04:09:34,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:10:19] 2025-11-25 04:09:34,208 | INFO     | ***************************************
[2025-11-24 23:10:19] 2025-11-25 04:09:34,208 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:10:19] 2025-11-25 04:09:34,208 | INFO     | ***************************************
[2025-11-24 23:10:19] 2025-11-25 04:09:34,208 | INFO     | 
[2025-11-24 23:10:19] 2025-11-25 04:09:34,214 | INFO     | architecture information:
[2025-11-24 23:10:19] 2025-11-25 04:09:34,215 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:10:19] 2025-11-25 04:09:34,247 | INFO     | cat /etc/os-release:
[2025-11-24 23:10:19] NAME="CentOS Linux"
[2025-11-24 23:10:19] VERSION="7 (Core)"
[2025-11-24 23:10:19] ID="centos"
[2025-11-24 23:10:19] ID_LIKE="rhel fedora"
[2025-11-24 23:10:19] VERSION_ID="7"
[2025-11-24 23:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:10:19] ANSI_COLOR="0;31"
[2025-11-24 23:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:10:19] HOME_URL="https://www.centos.org/"
[2025-11-24 23:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:10:19] 
[2025-11-24 23:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:10:19] 
[2025-11-24 23:10:19] 2025-11-25 04:09:34,248 | INFO     | ***************************************
[2025-11-24 23:10:19] 2025-11-25 04:09:34,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 23:10:19] 2025-11-25 04:09:34,792 | INFO     | sufficient remaining disk space (60264808448 B)
[2025-11-24 23:10:19] 2025-11-25 04:09:34,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:10:19] 2025-11-25 04:09:34,793 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:10:19] 2025-11-25 04:09:34,793 | INFO     | update_server=False
[2025-11-24 23:10:19] 2025-11-25 04:09:34,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:10:19] 2025-11-25 04:09:34,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:10:19] 2025-11-25 04:09:34,975 | INFO     | all payload control threads have been joined
[2025-11-24 23:10:19] 2025-11-25 04:09:35,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:10:19] 2025-11-25 04:09:35,115 | INFO     | aborting loop
[2025-11-24 23:10:19] 2025-11-25 04:09:35,176 | INFO     | all job control threads have been joined
[2025-11-24 23:10:19] 2025-11-25 04:09:35,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:10:19] 2025-11-25 04:09:35,489 | INFO     | all data control threads have been joined
[2025-11-24 23:10:19] 2025-11-25 04:09:35,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:10:19] 2025-11-25 04:09:35,800 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:35,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:35,942 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:35,949 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:35,981 | INFO     | [payload] control thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,121 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,182 | INFO     | [job] control thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,495 | INFO     | [data] control thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,504 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,602 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:36,801 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:37,152 | INFO     | [job] validate thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:37,153 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:37,278 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:37,317 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:09:39,331 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:10:19] 2025-11-25 04:10:04,500 | INFO     | PID=3262953 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:10:19] 2025-11-25 04:10:04,500 | INFO     | .. there are 9 such processes running
[2025-11-24 23:10:19] 2025-11-25 04:10:04,501 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:10:19] 2025-11-25 04:10:04,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:10:19] 2025-11-25 04:10:04,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:10:19] 2025-11-25 04:10:10,765 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:10:19] 2025-11-25 04:10:11,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590249178944)>', '<ExcThread(monitor, started 140589731387136)>']
[2025-11-24 23:10:19] 2025-11-25 04:10:11,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:10:19] 2025-11-25 04:10:11,543 | INFO     | [monitor] control thread has ended
[2025-11-24 23:10:19] 2025-11-25 04:10:16,561 | INFO     | all workflow threads have been joined
[2025-11-24 23:10:19] 2025-11-25 04:10:16,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:10:19] 2025-11-25 04:10:16,562 | INFO     | traces error code: 0
[2025-11-24 23:10:19] 2025-11-25 04:10:16,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:10:19] 2025-11-25 04:10:18,274 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:10:19] 2025-11-25 04:10:18,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:10:19] 2025-11-25 04:10:18,354 [wrapper] pilotpid: 3262953
[2025-11-24 23:10:19] 2025-11-25 04:10:18,398 [wrapper] Pilot exit status: 0
[2025-11-24 23:10:19] 2025-11-25 04:10:18,492 [wrapper] pandaids: 6895328345
[2025-11-24 23:10:19] 2025-11-25 04:10:18,561 [wrapper] cleanup supervisor_pilot 3057864 3262954
[2025-11-24 23:10:19] 2025-11-25 04:10:18,584 [wrapper] Test setup, not cleaning
[2025-11-24 23:10:19] 2025-11-25 04:10:18,607 [wrapper] apfmon messages muted
[2025-11-24 23:10:19] 2025-11-25 04:10:18,627 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:10:19] 2025-11-25 04:10:18,654 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:10:19]  *** Error codes and diagnostics ***
[2025-11-24 23:10:19]     "exeErrorCode": 0,
[2025-11-24 23:10:19]     "exeErrorDiag": "",
[2025-11-24 23:10:19]     "pilotErrorCode": 0,
[2025-11-24 23:10:19]     "pilotErrorDiag": "",
[2025-11-24 23:10:19]  *** Listing of results directory ***
[2025-11-24 23:10:19] total 1352932
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 11:59 pilot3.tar.gz
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 12:01 queuedata.json
[2025-11-24 23:10:19] -rwx------. 1 boincer umatlas     36292 Nov 21 12:02 runpilot2-wrapper.sh
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas       100 Nov 22 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:10:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 23:39 run_atlas
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas       105 Nov 22 23:39 job.xml
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas 410482842 Nov 22 23:39 EVNT.47483658._000073.pool.root.1
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:39 start_atlas.sh
[2025-11-24 23:10:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 23:39 shared
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 22 23:39 input.tar.gz
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas         0 Nov 22 23:39 boinc_lockfile
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas      2784 Nov 22 23:39 pandaJob.out
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas        57 Nov 22 23:39 setup.sh.local
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas    989784 Nov 22 23:40 agis_schedconf.cvmfs.json
[2025-11-24 23:10:19] drwx------. 5 boincer umatlas      4096 Nov 22 23:40 pilot3
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas       534 Nov 24 22:47 boinc_task_state.xml
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas      6615 Nov 24 23:01 init_data.xml
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas 924021179 Nov 24 23:06 HITS.47556137._000727.pool.root.1
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas      1071 Nov 24 23:08 memory_monitor_summary.json
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:09 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas        95 Nov 24 23:09 pilot_heartbeat.json
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas   3370686 Nov 24 23:09 log.47556137._000727.job.log.tgz.1
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas      8661 Nov 24 23:09 heartbeat.json
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas      4823 Nov 24 23:10 pilotlog.txt
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas  20119183 Nov 24 23:10 log.47556137._000727.job.log.1
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas       353 Nov 24 23:10 output.list
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas        30 Nov 24 23:10 wrapper_checkpoint.txt
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:10 boinc_mmap_file
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:10 runtime_log
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas  23511040 Nov 24 23:10 result.tar.gz
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas      9339 Nov 24 23:10 runtime_log.err
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas       666 Nov 24 23:10 HfBLDmjhjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsZJKDmhwNfnm.diag
[2025-11-24 23:10:19] -rw-r--r--. 1 boincer umatlas     21890 Nov 24 23:10 stderr.txt
[2025-11-24 23:10:19] HITS file was successfully produced:
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas 924021179 Nov 24 23:06 shared/HITS.pool.root.1
[2025-11-24 23:10:19]  *** Contents of shared directory: ***
[2025-11-24 23:10:19] total 1326796
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas 410482842 Nov 22 23:39 ATLAS.root_0
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:39 start_atlas.sh
[2025-11-24 23:10:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 22 23:39 input.tar.gz
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas 924021179 Nov 24 23:06 HITS.pool.root.1
[2025-11-24 23:10:19] -rw-------. 1 boincer umatlas  23511040 Nov 24 23:10 result.tar.gz
23:10:21 (3257933): run_atlas exited; CPU time 368493.940589
23:10:21 (3257933): called boinc_finish(0)

</stderr_txt>
]]>

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