Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:57:26 (4432): wrapper (7.7.26015): starting
20:57:26 (4432): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 20:57:26] Arguments: --nthreads 12
[2025-11-22 20:57:26] Threads: 12
[2025-11-22 20:57:26] Checking for CVMFS
[2025-11-22 20:57:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:57:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:57:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:57:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:57:26] 2.11.2.0 2910 33950 92632 153192 3 82 13859785 20275200 1 130560 0 3913189 99.784 1564735 26244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:57:26] CVMFS is ok
[2025-11-22 20:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:57:26] Further information can be found at the LHC@home message board.
[2025-11-22 20:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:57:26] Checking for apptainer binary...
[2025-11-22 20:57:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:57:26] Running /usr/bin/apptainer --version
[2025-11-22 20:57:26] apptainer version 1.3.2-1.el7
[2025-11-22 20:57:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:57:28] c-205-11.aglt2.org
[2025-11-22 20:57:28] apptainer works
[2025-11-22 20:57:28] Set ATHENA_PROC_NUMBER=12
[2025-11-22 20:57:28] Set ATHENA_CORE_NUMBER=12
[2025-11-22 20:57:28] Starting ATLAS job with PandaID=6895335022
[2025-11-22 20:57:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:53:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:53:30] 2025-11-23 08:52:34,119 | INFO     | monitor loop #1857: job 0:6895335022 is in state 'finished'
[2025-11-23 03:53:30] 2025-11-23 08:52:34,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,308 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 03:53:30] 2025-11-23 08:52:34,312 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-23 03:53:30] 2025-11-23 08:52:34,314 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895335022/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,315 | INFO     | extracted standard info from prmon json
[2025-11-23 03:53:30] 2025-11-23 08:52:34,315 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:53:30] 2025-11-23 08:52:34,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:53:30] 2025-11-23 08:52:34,323 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:53:30] 2025-11-23 08:52:34,323 | INFO     | sum of square deviations: 21059872791.997696
[2025-11-23 03:53:30] 2025-11-23 08:52:34,327 | INFO     | sum of deviations: 369489163082.34064
[2025-11-23 03:53:30] 2025-11-23 08:52:34,327 | INFO     | mean x: 1763875505.752451
[2025-11-23 03:53:30] 2025-11-23 08:52:34,327 | INFO     | mean y: 4103952.4093137253
[2025-11-23 03:53:30] 2025-11-23 08:52:34,327 | INFO     | intersect: -30942563714.527313
[2025-11-23 03:53:30] 2025-11-23 08:52:34,328 | INFO     | chi2: 6.462200134438916
[2025-11-23 03:53:30] 2025-11-23 08:52:34,328 | INFO     | sum of square deviations: 20295089866.67492
[2025-11-23 03:53:30] 2025-11-23 08:52:34,332 | INFO     | sum of deviations: 574673304403.1769
[2025-11-23 03:53:30] 2025-11-23 08:52:34,332 | INFO     | mean x: 1763875353.255583
[2025-11-23 03:53:30] 2025-11-23 08:52:34,332 | INFO     | mean y: 4144825.1439205958
[2025-11-23 03:53:30] 2025-11-23 08:52:34,332 | INFO     | intersect: -49941535852.779594
[2025-11-23 03:53:30] 2025-11-23 08:52:34,333 | INFO     | chi2: 2.9003310114078515
[2025-11-23 03:53:30] 2025-11-23 08:52:34,333 | INFO     | current chi2=2.9003310114078515 (change=55.11852076584325 %)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,333 | INFO     | sum of square deviations: 19549051478.844147
[2025-11-23 03:53:30] 2025-11-23 08:52:34,337 | INFO     | sum of deviations: 589471165051.362
[2025-11-23 03:53:30] 2025-11-23 08:52:34,337 | INFO     | mean x: 1763875200.758794
[2025-11-23 03:53:30] 2025-11-23 08:52:34,337 | INFO     | mean y: 4147806.753768844
[2025-11-23 03:53:30] 2025-11-23 08:52:34,337 | INFO     | intersect: -53182758510.50188
[2025-11-23 03:53:30] 2025-11-23 08:52:34,338 | INFO     | chi2: 2.755618402416726
[2025-11-23 03:53:30] 2025-11-23 08:52:34,338 | INFO     | current chi2=2.755618402416726 (change=4.989520452042495 %)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,338 | INFO     | right removable region: 397
[2025-11-23 03:53:30] 2025-11-23 08:52:34,338 | INFO     | sum of square deviations: 20295027036.67491
[2025-11-23 03:53:30] 2025-11-23 08:52:34,342 | INFO     | sum of deviations: 196613847713.5584
[2025-11-23 03:53:30] 2025-11-23 08:52:34,342 | INFO     | mean x: 1763875658.255583
[2025-11-23 03:53:30] 2025-11-23 08:52:34,342 | INFO     | mean y: 4138326.7518610423
[2025-11-23 03:53:30] 2025-11-23 08:52:34,342 | INFO     | intersect: -17083908879.650633
[2025-11-23 03:53:30] 2025-11-23 08:52:34,343 | INFO     | chi2: 3.865813499075205
[2025-11-23 03:53:30] 2025-11-23 08:52:34,343 | INFO     | current chi2=3.865813499075205 (change=40.17805981474982 %)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,343 | INFO     | sum of square deviations: 19548950157.35939
[2025-11-23 03:53:30] 2025-11-23 08:52:34,347 | INFO     | sum of deviations: 161727056078.41473
[2025-11-23 03:53:30] 2025-11-23 08:52:34,347 | INFO     | mean x: 1763875810.7562814
[2025-11-23 03:53:30] 2025-11-23 08:52:34,347 | INFO     | mean y: 4145448.334170854
[2025-11-23 03:53:30] 2025-11-23 08:52:34,347 | INFO     | intersect: -14588272040.343555
[2025-11-23 03:53:30] 2025-11-23 08:52:34,348 | INFO     | chi2: 3.8166393335952518
[2025-11-23 03:53:30] 2025-11-23 08:52:34,348 | INFO     | current chi2=3.8166393335952518 (change=1.2720263274914 %)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,348 | INFO     | left removable region: 20
[2025-11-23 03:53:30] 2025-11-23 08:52:34,348 | INFO     | sum of square deviations: 16614905329.47479
[2025-11-23 03:53:30] 2025-11-23 08:52:34,351 | INFO     | sum of deviations: 341473496699.3422
[2025-11-23 03:53:30] 2025-11-23 08:52:34,352 | INFO     | mean x: 1763875780.2652519
[2025-11-23 03:53:30] 2025-11-23 08:52:34,352 | INFO     | mean y: 4199514.76657825
[2025-11-23 03:53:30] 2025-11-23 08:52:34,352 | INFO     | intersect: -36247396175.15577
[2025-11-23 03:53:30] 2025-11-23 08:52:34,352 | INFO     | chi2: 0.036318443143764194
[2025-11-23 03:53:30] 2025-11-23 08:52:34,352 | INFO     | current memory leak: 20.55 B/s (using 377 data points, chi2=0.04)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | could have reported an average CPU frequency of 2390 MHz (17 samples)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | ..............................
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | . Timing measurements:
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | . get job = 0 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | . initial setup = 2 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | . payload setup = 7 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,353 | INFO     | . stage-in = 0 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,354 | INFO     | . payload execution = 24853 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,354 | INFO     | . stage-out = 3 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,354 | INFO     | . log creation = 0 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,354 | INFO     | ..............................
[2025-11-23 03:53:30] 2025-11-23 08:52:34,434 | INFO     | 
[2025-11-23 03:53:30] 2025-11-23 08:52:34,434 | INFO     | job summary report
[2025-11-23 03:53:30] 2025-11-23 08:52:34,434 | INFO     | --------------------------------------------------
[2025-11-23 03:53:30] 2025-11-23 08:52:34,434 | INFO     | PanDA job id: 6895335022
[2025-11-23 03:53:30] 2025-11-23 08:52:34,434 | INFO     | task id: 47556137
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | errors: (none)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | pilot state: finished 
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | transexitcode: 0
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | exeerrorcode: 0
[2025-11-23 03:53:30] 2025-11-23 08:52:34,435 | INFO     | exeerrordiag: 
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | exitcode: 0
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | exitmsg: OK
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | cpuconsumptiontime: 288385 s
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | nevents: 1000
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | neventsw: 0
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | pid: 14620
[2025-11-23 03:53:30] 2025-11-23 08:52:34,436 | INFO     | pgrp: 14620
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | corecount: 12
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | event service: False
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 24864: 2335938, 24868: 2344932, 24869: 2344988, 24875: 2345426}
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | --------------------------------------------------
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | 
[2025-11-23 03:53:30] 2025-11-23 08:52:34,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 03:53:30] 2025-11-23 08:52:34,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:53:30] 2025-11-23 08:52:34,495 | INFO     | job 6895335022 has completed (purged errors)
[2025-11-23 03:53:30] 2025-11-23 08:52:34,495 | INFO     | overall cleanup function is called
[2025-11-23 03:53:30] 2025-11-23 08:52:35,512 | INFO     | --- collectZombieJob: --- 10, [14620]
[2025-11-23 03:53:30] 2025-11-23 08:52:35,512 | INFO     | zombie collector waiting for pid 14620
[2025-11-23 03:53:30] 2025-11-23 08:52:35,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:53:30] 2025-11-23 08:52:35,512 | INFO     | collected zombie processes
[2025-11-23 03:53:30] 2025-11-23 08:52:35,513 | INFO     | will attempt to kill all subprocesses of pid=14620
[2025-11-23 03:53:30] 2025-11-23 08:52:35,603 | INFO     | process IDs to be killed: [14620] (in reverse order)
[2025-11-23 03:53:30] 2025-11-23 08:52:35,657 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:53:30] 2025-11-23 08:52:35,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:53:30] 2025-11-23 08:52:35,661 | INFO     | did not find any defunct processes belonging to 14620
[2025-11-23 03:53:30] 2025-11-23 08:52:35,665 | INFO     | did not find any defunct processes belonging to 14620
[2025-11-23 03:53:30] 2025-11-23 08:52:35,667 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:53:30] 2025-11-23 08:52:35,668 | INFO     | ready for new job
[2025-11-23 03:53:30] 2025-11-23 08:52:35,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:53:30] 2025-11-23 08:52:35,670 | INFO     | ***************************************
[2025-11-23 03:53:30] 2025-11-23 08:52:35,670 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:53:30] 2025-11-23 08:52:35,670 | INFO     | ***************************************
[2025-11-23 03:53:30] 2025-11-23 08:52:35,670 | INFO     | 
[2025-11-23 03:53:30] 2025-11-23 08:52:35,671 | INFO     | architecture information:
[2025-11-23 03:53:30] 2025-11-23 08:52:35,672 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:53:30] 2025-11-23 08:52:35,689 | INFO     | cat /etc/os-release:
[2025-11-23 03:53:30] NAME="CentOS Linux"
[2025-11-23 03:53:30] VERSION="7 (Core)"
[2025-11-23 03:53:30] ID="centos"
[2025-11-23 03:53:30] ID_LIKE="rhel fedora"
[2025-11-23 03:53:30] VERSION_ID="7"
[2025-11-23 03:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:53:30] ANSI_COLOR="0;31"
[2025-11-23 03:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:53:30] HOME_URL="https://www.centos.org/"
[2025-11-23 03:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:53:30] 
[2025-11-23 03:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:53:30] 
[2025-11-23 03:53:30] 2025-11-23 08:52:35,689 | INFO     | ***************************************
[2025-11-23 03:53:30] 2025-11-23 08:52:36,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 03:53:30] 2025-11-23 08:52:36,211 | INFO     | sufficient remaining disk space (28281143296 B)
[2025-11-23 03:53:30] 2025-11-23 08:52:36,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:53:30] 2025-11-23 08:52:36,212 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:53:30] 2025-11-23 08:52:36,212 | INFO     | update_server=False
[2025-11-23 03:53:30] 2025-11-23 08:52:36,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:53:30] 2025-11-23 08:52:36,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:53:30] 2025-11-23 08:52:36,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:53:30] 2025-11-23 08:52:36,622 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 03:53:30] 2025-11-23 08:52:36,622 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 03:53:30] 2025-11-23 08:52:36,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:53:30] 2025-11-23 08:52:36,623 | INFO     | will abort loop
[2025-11-23 03:53:30] 2025-11-23 08:52:36,880 | INFO     | all data control threads have been joined
[2025-11-23 03:53:30] 2025-11-23 08:52:37,054 | INFO     | all payload control threads have been joined
[2025-11-23 03:53:30] 2025-11-23 08:52:37,217 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,218 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,256 | INFO     | [job] validate thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,278 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,334 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,457 | INFO     | all job control threads have been joined
[2025-11-23 03:53:30] 2025-11-23 08:52:37,496 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,628 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,885 | INFO     | [data] control thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:37,969 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:38,060 | INFO     | [payload] control thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:38,218 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:38,463 | INFO     | [job] control thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:38,580 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:38,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:52:39,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:53:30] 2025-11-23 08:52:43,299 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:53:30] 2025-11-23 08:53:06,934 | INFO     | PID=8104 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 03:53:30] 2025-11-23 08:53:06,935 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:53:30] 2025-11-23 08:53:06,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:53:30] 2025-11-23 08:53:06,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:53:30] 2025-11-23 08:53:23,724 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:53:30] 2025-11-23 08:53:25,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252165891904)>', '<ExcThread(monitor, started 140251720824576)>']
[2025-11-23 03:53:30] 2025-11-23 08:53:26,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:53:30] 2025-11-23 08:53:26,027 | INFO     | [monitor] control thread has ended
[2025-11-23 03:53:30] 2025-11-23 08:53:30,358 | INFO     | all workflow threads have been joined
[2025-11-23 03:53:30] 2025-11-23 08:53:30,358 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:53:30] 2025-11-23 08:53:30,359 | INFO     | traces error code: 0
[2025-11-23 03:53:30] 2025-11-23 08:53:30,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:53:30] 2025-11-23 08:53:30,453 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:53:30] 2025-11-23 08:53:30,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:53:30] 2025-11-23 08:53:30,461 [wrapper] pilotpid: 8104
[2025-11-23 03:53:30] 2025-11-23 08:53:30,465 [wrapper] Pilot exit status: 0
[2025-11-23 03:53:30] 2025-11-23 08:53:30,480 [wrapper] pandaids: 6895335022
[2025-11-23 03:53:30] 2025-11-23 08:53:30,527 [wrapper] cleanup supervisor_pilot 14013 8105
[2025-11-23 03:53:30] 2025-11-23 08:53:30,532 [wrapper] Test setup, not cleaning
[2025-11-23 03:53:30] 2025-11-23 08:53:30,536 [wrapper] apfmon messages muted
[2025-11-23 03:53:30] 2025-11-23 08:53:30,540 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:53:30] 2025-11-23 08:53:30,544 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:53:30]  *** Error codes and diagnostics ***
[2025-11-23 03:53:30]     "exeErrorCode": 0,
[2025-11-23 03:53:30]     "exeErrorDiag": "",
[2025-11-23 03:53:30]     "pilotErrorCode": 0,
[2025-11-23 03:53:30]     "pilotErrorDiag": "",
[2025-11-23 03:53:30]  *** Listing of results directory ***
[2025-11-23 03:53:30] total 1314632
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:55 pilot3.tar.gz
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 23:00 queuedata.json
[2025-11-23 03:53:30] -rwx------ 1 boincer umatlas     36292 Nov 21 23:03 runpilot2-wrapper.sh
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas       100 Nov 22 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:53:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 20:57 run_atlas
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas       105 Nov 22 20:57 job.xml
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas 410950249 Nov 22 20:57 EVNT.47483658._000245.pool.root.1
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:57 start_atlas.sh
[2025-11-23 03:53:30] drwxrwx--x 2 boincer umatlas      4096 Nov 22 20:57 shared
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 20:57 input.tar.gz
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas         0 Nov 22 20:57 boinc_lockfile
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 20:57 pandaJob.out
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas    989784 Nov 22 20:57 agis_schedconf.cvmfs.json
[2025-11-23 03:53:30] drwx------ 5 boincer umatlas      4096 Nov 22 20:57 pilot3
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas       532 Nov 23 03:45 boinc_task_state.xml
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas      5871 Nov 23 03:48 init_data.xml
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas 920046418 Nov 23 03:51 HITS.47556137._002414.pool.root.1
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas      1064 Nov 23 03:52 memory_monitor_summary.json
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas   1526164 Nov 23 03:52 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas   2161735 Nov 23 03:52 log.47556137._002414.job.log.tgz.1
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas      8665 Nov 23 03:52 heartbeat.json
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas        95 Nov 23 03:53 pilot_heartbeat.json
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 03:53 boinc_mmap_file
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas        29 Nov 23 03:53 wrapper_checkpoint.txt
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas      4931 Nov 23 03:53 pilotlog.txt
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas   3471417 Nov 23 03:53 log.47556137._002414.job.log.1
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas       353 Nov 23 03:53 output.list
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas       620 Nov 23 03:53 runtime_log
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas   5652480 Nov 23 03:53 result.tar.gz
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas      8820 Nov 23 03:53 runtime_log.err
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas       669 Nov 23 03:53 nj2NDmf1tg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQwHKDmCaGCKo.diag
[2025-11-23 03:53:30] -rw-r--r-- 1 boincer umatlas     21286 Nov 23 03:53 stderr.txt
[2025-11-23 03:53:30] HITS file was successfully produced:
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas 920046418 Nov 23 03:51 shared/HITS.pool.root.1
[2025-11-23 03:53:30]  *** Contents of shared directory: ***
[2025-11-23 03:53:30] total 1305928
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas 410950249 Nov 22 20:57 ATLAS.root_0
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:57 start_atlas.sh
[2025-11-23 03:53:30] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 20:57 input.tar.gz
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas 920046418 Nov 23 03:51 HITS.pool.root.1
[2025-11-23 03:53:30] -rw------- 1 boincer umatlas   5652480 Nov 23 03:53 result.tar.gz
03:53:31 (4432): run_atlas exited; CPU time 284926.190553
03:53:31 (4432): called boinc_finish(0)

</stderr_txt>
]]>

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