Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:10:03 (29577): wrapper (7.7.26015): starting
21:10:03 (29577): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 21:10:03] Arguments: --nthreads 8
[2025-11-22 21:10:03] Threads: 8
[2025-11-22 21:10:03] Checking for CVMFS
[2025-11-22 21:10:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 21:10:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 21:10:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 21:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 21:10:03] 2.11.2.0 16446 112726 135600 153192 0 104 15783609 18432001 1859 130560 0 80269085 99.973 4701012 30059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 21:10:03] CVMFS is ok
[2025-11-22 21:10:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 21:10:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 21:10:03] Further information can be found at the LHC@home message board.
[2025-11-22 21:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 21:10:03] Checking for apptainer binary...
[2025-11-22 21:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 21:10:03] Running /usr/bin/apptainer --version
[2025-11-22 21:10:03] apptainer version 1.3.2-1.el7
[2025-11-22 21:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 21:10:04] c-206-26.aglt2.org
[2025-11-22 21:10:04] apptainer works
[2025-11-22 21:10:04] Set ATHENA_PROC_NUMBER=8
[2025-11-22 21:10:04] Set ATHENA_CORE_NUMBER=8
[2025-11-22 21:10:04] Starting ATLAS job with PandaID=6895334506
[2025-11-22 21:10:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:36:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:36:24] 2025-11-23 22:35:29,264 | INFO     | monitor loop #5235: job 0:6895334506 is in state 'finished'
[2025-11-23 17:36:24] 2025-11-23 22:35:29,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:36:24] 2025-11-23 22:35:29,909 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 17:36:24] 2025-11-23 22:35:29,914 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2422.4166666666665
[2025-11-23 17:36:24] 2025-11-23 22:35:29,917 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895334506/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:36:24] 2025-11-23 22:35:29,918 | INFO     | extracted standard info from prmon json
[2025-11-23 17:36:24] 2025-11-23 22:35:29,918 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:36:24] 2025-11-23 22:35:29,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:36:24] 2025-11-23 22:35:29,934 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:36:24] 2025-11-23 22:35:29,935 | INFO     | sum of square deviations: 542546946311.40735
[2025-11-23 17:36:24] 2025-11-23 22:35:29,962 | INFO     | sum of deviations: 2708225498705.4937
[2025-11-23 17:36:24] 2025-11-23 22:35:29,962 | INFO     | mean x: 1763900566.6406639
[2025-11-23 17:36:24] 2025-11-23 22:35:29,962 | INFO     | mean y: 2885547.887966805
[2025-11-23 17:36:24] 2025-11-23 22:35:29,962 | INFO     | intersect: -8801957100.724827
[2025-11-23 17:36:24] 2025-11-23 22:35:29,963 | INFO     | chi2: 5.605973755111075
[2025-11-23 17:36:24] 2025-11-23 22:35:29,964 | INFO     | sum of square deviations: 535821437059.348
[2025-11-23 17:36:24] 2025-11-23 22:35:29,995 | INFO     | sum of deviations: 3078231970273.0176
[2025-11-23 17:36:24] 2025-11-23 22:35:29,995 | INFO     | mean x: 1763900414.1433334
[2025-11-23 17:36:24] 2025-11-23 22:35:29,995 | INFO     | mean y: 2893933.470833333
[2025-11-23 17:36:24] 2025-11-23 22:35:29,995 | INFO     | intersect: -10130509233.436108
[2025-11-23 17:36:24] 2025-11-23 22:35:29,996 | INFO     | chi2: 2.867461063658507
[2025-11-23 17:36:24] 2025-11-23 22:35:29,996 | INFO     | current chi2=2.867461063658507 (change=48.849902105870775 %)
[2025-11-23 17:36:24] 2025-11-23 22:35:29,997 | INFO     | sum of square deviations: 529151742807.2681
[2025-11-23 17:36:24] 2025-11-23 22:35:30,024 | INFO     | sum of deviations: 3193514857032.6704
[2025-11-23 17:36:24] 2025-11-23 22:35:30,024 | INFO     | mean x: 1763900261.6460252
[2025-11-23 17:36:24] 2025-11-23 22:35:30,024 | INFO     | mean y: 2896565.1623430965
[2025-11-23 17:36:24] 2025-11-23 22:35:30,024 | INFO     | intersect: -10642521820.886717
[2025-11-23 17:36:24] 2025-11-23 22:35:30,025 | INFO     | chi2: 2.40236638753397
[2025-11-23 17:36:24] 2025-11-23 22:35:30,025 | INFO     | current chi2=2.40236638753397 (change=16.219738151601497 %)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,025 | INFO     | right removable region: 1194
[2025-11-23 17:36:24] 2025-11-23 22:35:30,027 | INFO     | sum of square deviations: 535821039400.634
[2025-11-23 17:36:24] 2025-11-23 22:35:30,070 | INFO     | sum of deviations: 2391865063903.1567
[2025-11-23 17:36:24] 2025-11-23 22:35:30,070 | INFO     | mean x: 1763900719.1425
[2025-11-23 17:36:24] 2025-11-23 22:35:30,071 | INFO     | mean y: 2892713.700833333
[2025-11-23 17:36:24] 2025-11-23 22:35:30,071 | INFO     | intersect: -7871028233.916231
[2025-11-23 17:36:24] 2025-11-23 22:35:30,072 | INFO     | chi2: 3.6060352964845586
[2025-11-23 17:36:24] 2025-11-23 22:35:30,073 | INFO     | current chi2=3.6060352964845586 (change=35.6751306015861 %)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,074 | INFO     | sum of square deviations: 529151167334.70844
[2025-11-23 17:36:24] 2025-11-23 22:35:30,123 | INFO     | sum of deviations: 2284644778716.6626
[2025-11-23 17:36:24] 2025-11-23 22:35:30,123 | INFO     | mean x: 1763900871.641841
[2025-11-23 17:36:24] 2025-11-23 22:35:30,123 | INFO     | mean y: 2895164.89874477
[2025-11-23 17:36:24] 2025-11-23 22:35:30,123 | INFO     | intersect: -7612862231.741834
[2025-11-23 17:36:24] 2025-11-23 22:35:30,125 | INFO     | chi2: 3.4926390324758003
[2025-11-23 17:36:24] 2025-11-23 22:35:30,125 | INFO     | current chi2=3.4926390324758003 (change=3.144624350163895 %)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,126 | INFO     | left removable region: 20
[2025-11-23 17:36:24] 2025-11-23 22:35:30,127 | INFO     | sum of square deviations: 501742122330.9155
[2025-11-23 17:36:24] 2025-11-23 22:35:30,164 | INFO     | sum of deviations: 2617870705962.0845
[2025-11-23 17:36:24] 2025-11-23 22:35:30,165 | INFO     | mean x: 1763900841.149063
[2025-11-23 17:36:24] 2025-11-23 22:35:30,165 | INFO     | mean y: 2910004.713798978
[2025-11-23 17:36:24] 2025-11-23 22:35:30,165 | INFO     | intersect: -9200352258.406519
[2025-11-23 17:36:24] 2025-11-23 22:35:30,166 | INFO     | chi2: 0.1986189607671041
[2025-11-23 17:36:24] 2025-11-23 22:35:30,166 | INFO     | current memory leak: 5.22 B/s (using 1174 data points, chi2=0.20)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | could have reported an average CPU frequency of 2638 MHz (43 samples)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | ..............................
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | . Timing measurements:
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | . get job = 0 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | . initial setup = 2 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | . payload setup = 5 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,167 | INFO     | . stage-in = 0 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,168 | INFO     | . payload execution = 73478 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,168 | INFO     | . stage-out = 3 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,168 | INFO     | . log creation = 0 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,168 | INFO     | ..............................
[2025-11-23 17:36:24] 2025-11-23 22:35:30,309 | INFO     | 
[2025-11-23 17:36:24] 2025-11-23 22:35:30,309 | INFO     | job summary report
[2025-11-23 17:36:24] 2025-11-23 22:35:30,309 | INFO     | --------------------------------------------------
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | PanDA job id: 6895334506
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | task id: 47556149
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | errors: (none)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | pilot state: finished 
[2025-11-23 17:36:24] 2025-11-23 22:35:30,310 | INFO     | transexitcode: 0
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | exeerrorcode: 0
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | exeerrordiag: 
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | exitcode: 0
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | exitmsg: OK
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | cpuconsumptiontime: 567108 s
[2025-11-23 17:36:24] 2025-11-23 22:35:30,311 | INFO     | nevents: 1000
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | neventsw: 0
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | pid: 8267
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | pgrp: 8267
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | corecount: 8
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | event service: False
[2025-11-23 17:36:24] 2025-11-23 22:35:30,312 | INFO     | sizes: {0: 2298583, 1: 2298782, 4: 2299044, 12: 2299072, 73488: 2357684, 73493: 2366862, 73497: 2367052}
[2025-11-23 17:36:24] 2025-11-23 22:35:30,313 | INFO     | --------------------------------------------------
[2025-11-23 17:36:24] 2025-11-23 22:35:30,313 | INFO     | 
[2025-11-23 17:36:24] 2025-11-23 22:35:30,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 17:36:24] 2025-11-23 22:35:30,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:36:24] 2025-11-23 22:35:30,338 | INFO     | job 6895334506 has completed (purged errors)
[2025-11-23 17:36:24] 2025-11-23 22:35:30,338 | INFO     | overall cleanup function is called
[2025-11-23 17:36:24] 2025-11-23 22:35:31,351 | INFO     | --- collectZombieJob: --- 10, [8267]
[2025-11-23 17:36:24] 2025-11-23 22:35:31,352 | INFO     | zombie collector waiting for pid 8267
[2025-11-23 17:36:24] 2025-11-23 22:35:31,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:36:24] 2025-11-23 22:35:31,352 | INFO     | collected zombie processes
[2025-11-23 17:36:24] 2025-11-23 22:35:31,352 | INFO     | will attempt to kill all subprocesses of pid=8267
[2025-11-23 17:36:24] 2025-11-23 22:35:31,498 | INFO     | process IDs to be killed: [8267] (in reverse order)
[2025-11-23 17:36:24] 2025-11-23 22:35:31,567 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:36:24] 2025-11-23 22:35:31,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:36:24] 2025-11-23 22:35:31,572 | INFO     | did not find any defunct processes belonging to 8267
[2025-11-23 17:36:24] 2025-11-23 22:35:31,577 | INFO     | did not find any defunct processes belonging to 8267
[2025-11-23 17:36:24] 2025-11-23 22:35:31,579 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:36:24] 2025-11-23 22:35:31,579 | INFO     | ready for new job
[2025-11-23 17:36:24] 2025-11-23 22:35:31,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:36:24] 2025-11-23 22:35:31,584 | INFO     | ***************************************
[2025-11-23 17:36:24] 2025-11-23 22:35:31,584 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:36:24] 2025-11-23 22:35:31,585 | INFO     | ***************************************
[2025-11-23 17:36:24] 2025-11-23 22:35:31,585 | INFO     | 
[2025-11-23 17:36:24] 2025-11-23 22:35:31,586 | INFO     | architecture information:
[2025-11-23 17:36:24] 2025-11-23 22:35:31,586 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:36:24] 2025-11-23 22:35:31,600 | INFO     | cat /etc/os-release:
[2025-11-23 17:36:24] NAME="CentOS Linux"
[2025-11-23 17:36:24] VERSION="7 (Core)"
[2025-11-23 17:36:24] ID="centos"
[2025-11-23 17:36:24] ID_LIKE="rhel fedora"
[2025-11-23 17:36:24] VERSION_ID="7"
[2025-11-23 17:36:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:36:24] ANSI_COLOR="0;31"
[2025-11-23 17:36:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:36:24] HOME_URL="https://www.centos.org/"
[2025-11-23 17:36:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:36:24] 
[2025-11-23 17:36:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:36:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:36:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:36:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:36:24] 
[2025-11-23 17:36:24] 2025-11-23 22:35:31,601 | INFO     | ***************************************
[2025-11-23 17:36:24] 2025-11-23 22:35:32,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 17:36:24] 2025-11-23 22:35:32,119 | INFO     | sufficient remaining disk space (25574768640 B)
[2025-11-23 17:36:24] 2025-11-23 22:35:32,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:36:24] 2025-11-23 22:35:32,120 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:36:24] 2025-11-23 22:35:32,120 | INFO     | update_server=False
[2025-11-23 17:36:24] 2025-11-23 22:35:32,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:36:24] 2025-11-23 22:35:32,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:36:24] 2025-11-23 22:35:32,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:36:24] 2025-11-23 22:35:32,369 | INFO     | all job control threads have been joined
[2025-11-23 17:36:24] 2025-11-23 22:35:32,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:36:24] 2025-11-23 22:35:32,777 | INFO     | aborting loop
[2025-11-23 17:36:24] 2025-11-23 22:35:33,086 | INFO     | all data control threads have been joined
[2025-11-23 17:36:24] 2025-11-23 22:35:33,126 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,126 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,344 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,369 | INFO     | all payload control threads have been joined
[2025-11-23 17:36:24] 2025-11-23 22:35:33,377 | INFO     | [job] control thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,382 | INFO     | [job] validate thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:36:24] 2025-11-23 22:35:33,588 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:33,786 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,091 | INFO     | [data] control thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,095 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,318 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,374 | INFO     | [payload] control thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:34,702 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:35,473 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:36,188 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:35:43,148 | INFO     | job.realtimelogging is not enabled
[2025-11-23 17:36:24] 2025-11-23 22:35:44,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:36:24] 2025-11-23 22:36:01,616 | INFO     | PID=1705 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 17:36:24] 2025-11-23 22:36:01,616 | INFO     | .. there are 3 such processes running
[2025-11-23 17:36:24] 2025-11-23 22:36:01,617 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:36:24] 2025-11-23 22:36:01,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:36:24] 2025-11-23 22:36:01,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:36:24] 2025-11-23 22:36:18,070 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:36:24] 2025-11-23 22:36:19,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834593232704)>', '<ExcThread(monitor, started 139833708103424)>']
[2025-11-23 17:36:24] 2025-11-23 22:36:19,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:36:24] 2025-11-23 22:36:19,715 | INFO     | [monitor] control thread has ended
[2025-11-23 17:36:24] 2025-11-23 22:36:24,498 | INFO     | all workflow threads have been joined
[2025-11-23 17:36:24] 2025-11-23 22:36:24,499 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:36:24] 2025-11-23 22:36:24,499 | INFO     | traces error code: 0
[2025-11-23 17:36:24] 2025-11-23 22:36:24,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:36:24] 2025-11-23 22:36:24,616 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:36:24] 2025-11-23 22:36:24,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:36:24] 2025-11-23 22:36:24,621 [wrapper] pilotpid: 1705
[2025-11-23 17:36:24] 2025-11-23 22:36:24,623 [wrapper] Pilot exit status: 0
[2025-11-23 17:36:24] 2025-11-23 22:36:24,639 [wrapper] pandaids: 6895334506
[2025-11-23 17:36:24] 2025-11-23 22:36:24,684 [wrapper] cleanup supervisor_pilot  4026 1710
[2025-11-23 17:36:24] 2025-11-23 22:36:24,686 [wrapper] Test setup, not cleaning
[2025-11-23 17:36:24] 2025-11-23 22:36:24,689 [wrapper] apfmon messages muted
[2025-11-23 17:36:24] 2025-11-23 22:36:24,691 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:36:24] 2025-11-23 22:36:24,694 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:36:24]  *** Error codes and diagnostics ***
[2025-11-23 17:36:24]     "exeErrorCode": 0,
[2025-11-23 17:36:24]     "exeErrorDiag": "",
[2025-11-23 17:36:24]     "pilotErrorCode": 0,
[2025-11-23 17:36:24]     "pilotErrorDiag": "",
[2025-11-23 17:36:24]  *** Listing of results directory ***
[2025-11-23 17:36:24] total 1337012
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:44 pilot3.tar.gz
[2025-11-23 17:36:24] -rwx------ 1 boincer umatlas     36292 Nov 21 22:54 runpilot2-wrapper.sh
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 22:54 queuedata.json
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas       100 Nov 22 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:36:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 21:09 run_atlas
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas       105 Nov 22 21:09 job.xml
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas 409143373 Nov 22 21:10 EVNT.47483658._001061.pool.root.1
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 21:10 start_atlas.sh
[2025-11-23 17:36:24] drwxrwx--x 2 boincer umatlas      4096 Nov 22 21:10 shared
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 21:10 input.tar.gz
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas         0 Nov 22 21:10 boinc_lockfile
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 21:10 pandaJob.out
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas        57 Nov 22 21:10 setup.sh.local
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas    989784 Nov 22 21:10 agis_schedconf.cvmfs.json
[2025-11-23 17:36:24] drwx------ 5 boincer umatlas      4096 Nov 22 21:10 pilot3
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas       533 Nov 23 17:24 boinc_task_state.xml
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 17:27 init_data.xml
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas 930985372 Nov 23 17:34 HITS.47556149._000476.pool.root.1
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas      1065 Nov 23 17:35 memory_monitor_summary.json
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas   1526164 Nov 23 17:35 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas   2361024 Nov 23 17:35 log.47556149._000476.job.log.tgz.1
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas      8665 Nov 23 17:35 heartbeat.json
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas        95 Nov 23 17:36 pilot_heartbeat.json
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 17:36 boinc_mmap_file
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas        29 Nov 23 17:36 wrapper_checkpoint.txt
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas      4892 Nov 23 17:36 pilotlog.txt
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas  10158253 Nov 23 17:36 log.47556149._000476.job.log.1
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas       353 Nov 23 17:36 output.list
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas       620 Nov 23 17:36 runtime_log
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas  12544000 Nov 23 17:36 result.tar.gz
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 17:36 runtime_log.err
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas       668 Nov 23 17:36 jucKDm1stg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEwHKDmVgcW0n.diag
[2025-11-23 17:36:24] -rw-r--r-- 1 boincer umatlas     21250 Nov 23 17:36 stderr.txt
[2025-11-23 17:36:24] HITS file was successfully produced:
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas 930985372 Nov 23 17:34 shared/HITS.pool.root.1
[2025-11-23 17:36:24]  *** Contents of shared directory: ***
[2025-11-23 17:36:24] total 1321576
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas 409143373 Nov 22 21:10 ATLAS.root_0
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 21:10 start_atlas.sh
[2025-11-23 17:36:24] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 21:10 input.tar.gz
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas 930985372 Nov 23 17:34 HITS.pool.root.1
[2025-11-23 17:36:24] -rw------- 1 boincer umatlas  12544000 Nov 23 17:36 result.tar.gz
17:36:26 (29577): run_atlas exited; CPU time 565810.769095
17:36:26 (29577): called boinc_finish(0)

</stderr_txt>
]]>

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