Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:03 (21442): wrapper (7.7.26015): starting
21:58:03 (21442): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 21:58:03] Arguments: --nthreads 12
[2025-11-22 21:58:03] Threads: 12
[2025-11-22 21:58:03] Checking for CVMFS
[2025-11-22 21:58:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 21:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 21:58:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 21:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 21:58:04] 2.11.2.0 2979 282805 92368 153193 0 81 10933509 20275201 1 130560 1 126593769 99.974 15865241 13774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 21:58:04] CVMFS is ok
[2025-11-22 21:58:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 21:58:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 21:58:04] Further information can be found at the LHC@home message board.
[2025-11-22 21:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 21:58:04] Checking for apptainer binary...
[2025-11-22 21:58:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 21:58:04] Running /usr/bin/apptainer --version
[2025-11-22 21:58:04] apptainer version 1.3.2-1.el7
[2025-11-22 21:58:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 21:58:05] c-205-21.aglt2.org
[2025-11-22 21:58:05] apptainer works
[2025-11-22 21:58:05] Set ATHENA_PROC_NUMBER=12
[2025-11-22 21:58:05] Set ATHENA_CORE_NUMBER=12
[2025-11-22 21:58:05] Starting ATLAS job with PandaID=6895334547
[2025-11-22 21:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 05:02:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 05:02:24] 2025-11-23 10:01:48,896 | INFO     | time since job start (25407s) is within the limit (172800.0s)
[2025-11-23 05:02:24] 2025-11-23 10:01:49,417 | INFO     | monitor loop #1904: job 0:6895334547 is in state 'finished'
[2025-11-23 05:02:24] 2025-11-23 10:01:49,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 05:02:24] 2025-11-23 10:01:50,901 | INFO     | time since job start (25409s) is within the limit (172800.0s)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,393 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 05:02:24] 2025-11-23 10:01:51,397 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-23 05:02:24] 2025-11-23 10:01:51,399 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895334547/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,400 | INFO     | extracted standard info from prmon json
[2025-11-23 05:02:24] 2025-11-23 10:01:51,401 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 05:02:24] 2025-11-23 10:01:51,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 05:02:24] 2025-11-23 10:01:51,407 | INFO     | fitting pss+swap vs Time
[2025-11-23 05:02:24] 2025-11-23 10:01:51,408 | INFO     | sum of square deviations: 22323398249.305435
[2025-11-23 05:02:24] 2025-11-23 10:01:51,411 | INFO     | sum of deviations: 446298378335.44226
[2025-11-23 05:02:24] 2025-11-23 10:01:51,411 | INFO     | mean x: 1763879388.7716346
[2025-11-23 05:02:24] 2025-11-23 10:01:51,411 | INFO     | mean y: 3428665.173076923
[2025-11-23 05:02:24] 2025-11-23 10:01:51,412 | INFO     | intersect: -35260759250.86631
[2025-11-23 05:02:24] 2025-11-23 10:01:51,412 | INFO     | chi2: 5.170576940593714
[2025-11-23 05:02:24] 2025-11-23 10:01:51,413 | INFO     | sum of square deviations: 21528143383.93189
[2025-11-23 05:02:24] 2025-11-23 10:01:51,416 | INFO     | sum of deviations: 587259407593.9418
[2025-11-23 05:02:24] 2025-11-23 10:01:51,416 | INFO     | mean x: 1763879236.274939
[2025-11-23 05:02:24] 2025-11-23 10:01:51,417 | INFO     | mean y: 3455655.6642335765
[2025-11-23 05:02:24] 2025-11-23 10:01:51,417 | INFO     | intersect: -48112847589.28783
[2025-11-23 05:02:24] 2025-11-23 10:01:51,417 | INFO     | chi2: 2.679777121830651
[2025-11-23 05:02:24] 2025-11-23 10:01:51,417 | INFO     | current chi2=2.679777121830651 (change=48.1725704380884 %)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,418 | INFO     | sum of square deviations: 20751980206.603466
[2025-11-23 05:02:24] 2025-11-23 10:01:51,421 | INFO     | sum of deviations: 584560827323.9313
[2025-11-23 05:02:24] 2025-11-23 10:01:51,421 | INFO     | mean x: 1763879083.775862
[2025-11-23 05:02:24] 2025-11-23 10:01:51,422 | INFO     | mean y: 3455106.6256157635
[2025-11-23 05:02:24] 2025-11-23 10:01:51,422 | INFO     | intersect: -49683110042.6266
[2025-11-23 05:02:24] 2025-11-23 10:01:51,422 | INFO     | chi2: 2.628826601434223
[2025-11-23 05:02:24] 2025-11-23 10:01:51,422 | INFO     | current chi2=2.628826601434223 (change=1.901296939262691 %)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,422 | INFO     | right removable region: 405
[2025-11-23 05:02:24] 2025-11-23 10:01:51,423 | INFO     | sum of square deviations: 21528074453.931877
[2025-11-23 05:02:24] 2025-11-23 10:01:51,427 | INFO     | sum of deviations: 303119464501.81726
[2025-11-23 05:02:24] 2025-11-23 10:01:51,427 | INFO     | mean x: 1763879541.274939
[2025-11-23 05:02:24] 2025-11-23 10:01:51,427 | INFO     | mean y: 3456042.700729927
[2025-11-23 05:02:24] 2025-11-23 10:01:51,427 | INFO     | intersect: -24832310070.10735
[2025-11-23 05:02:24] 2025-11-23 10:01:51,427 | INFO     | chi2: 2.716421475526224
[2025-11-23 05:02:24] 2025-11-23 10:01:51,428 | INFO     | current chi2=2.716421475526224 (change=47.463861253086584 %)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,428 | INFO     | sum of square deviations: 20751917437.152718
[2025-11-23 05:02:24] 2025-11-23 10:01:51,432 | INFO     | sum of deviations: 271019478155.02954
[2025-11-23 05:02:24] 2025-11-23 10:01:51,432 | INFO     | mean x: 1763879693.773399
[2025-11-23 05:02:24] 2025-11-23 10:01:51,432 | INFO     | mean y: 3462341.891625616
[2025-11-23 05:02:24] 2025-11-23 10:01:51,432 | INFO     | intersect: -23032758555.887283
[2025-11-23 05:02:24] 2025-11-23 10:01:51,433 | INFO     | chi2: 2.6700299603449382
[2025-11-23 05:02:24] 2025-11-23 10:01:51,433 | INFO     | current chi2=2.6700299603449382 (change=1.7078172735436419 %)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,433 | INFO     | left removable region: 20
[2025-11-23 05:02:24] 2025-11-23 10:01:51,433 | INFO     | sum of square deviations: 17695528872.81556
[2025-11-23 05:02:24] 2025-11-23 10:01:51,436 | INFO     | sum of deviations: 357493877681.53485
[2025-11-23 05:02:24] 2025-11-23 10:01:51,437 | INFO     | mean x: 1763879663.2753246
[2025-11-23 05:02:24] 2025-11-23 10:01:51,437 | INFO     | mean y: 3500730.9194805194
[2025-11-23 05:02:24] 2025-11-23 10:01:51,437 | INFO     | intersect: -35631273743.473724
[2025-11-23 05:02:24] 2025-11-23 10:01:51,437 | INFO     | chi2: 0.06415685815519301
[2025-11-23 05:02:24] 2025-11-23 10:01:51,437 | INFO     | current memory leak: 20.20 B/s (using 385 data points, chi2=0.06)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | could have reported an average CPU frequency of 2382 MHz (18 samples)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | ..............................
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | . Timing measurements:
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | . get job = 0 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | . initial setup = 2 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,438 | INFO     | . payload setup = 7 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,439 | INFO     | . stage-in = 0 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,439 | INFO     | . payload execution = 25370 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,439 | INFO     | . stage-out = 3 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,439 | INFO     | . log creation = 0 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,439 | INFO     | ..............................
[2025-11-23 05:02:24] 2025-11-23 10:01:51,519 | INFO     | 
[2025-11-23 05:02:24] 2025-11-23 10:01:51,519 | INFO     | job summary report
[2025-11-23 05:02:24] 2025-11-23 10:01:51,519 | INFO     | --------------------------------------------------
[2025-11-23 05:02:24] 2025-11-23 10:01:51,519 | INFO     | PanDA job id: 6895334547
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | task id: 47556137
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | errors: (none)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | pilot state: finished 
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | transexitcode: 0
[2025-11-23 05:02:24] 2025-11-23 10:01:51,520 | INFO     | exeerrorcode: 0
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | exeerrordiag: 
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | exitcode: 0
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | exitmsg: OK
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | cpuconsumptiontime: 292593 s
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | nevents: 1000
[2025-11-23 05:02:24] 2025-11-23 10:01:51,521 | INFO     | neventsw: 0
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | pid: 31534
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | pgrp: 31534
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | corecount: 12
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | event service: False
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | sizes: {0: 2298580, 1: 2298835, 6: 2299097, 12: 2299125, 25382: 2336222, 25386: 2345216, 25389: 2345400, 25394: 2345646}
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | --------------------------------------------------
[2025-11-23 05:02:24] 2025-11-23 10:01:51,522 | INFO     | 
[2025-11-23 05:02:24] 2025-11-23 10:01:51,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 05:02:24] 2025-11-23 10:01:51,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 05:02:24] 2025-11-23 10:01:51,550 | INFO     | job 6895334547 has completed (purged errors)
[2025-11-23 05:02:24] 2025-11-23 10:01:51,550 | INFO     | overall cleanup function is called
[2025-11-23 05:02:24] 2025-11-23 10:01:52,567 | INFO     | --- collectZombieJob: --- 10, [31534]
[2025-11-23 05:02:24] 2025-11-23 10:01:52,567 | INFO     | zombie collector waiting for pid 31534
[2025-11-23 05:02:24] 2025-11-23 10:01:52,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 05:02:24] 2025-11-23 10:01:52,567 | INFO     | collected zombie processes
[2025-11-23 05:02:24] 2025-11-23 10:01:52,567 | INFO     | will attempt to kill all subprocesses of pid=31534
[2025-11-23 05:02:24] 2025-11-23 10:01:52,658 | INFO     | process IDs to be killed: [31534] (in reverse order)
[2025-11-23 05:02:24] 2025-11-23 10:01:52,710 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 05:02:24] 2025-11-23 10:01:52,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 05:02:24] 2025-11-23 10:01:52,715 | INFO     | did not find any defunct processes belonging to 31534
[2025-11-23 05:02:24] 2025-11-23 10:01:52,718 | INFO     | did not find any defunct processes belonging to 31534
[2025-11-23 05:02:24] 2025-11-23 10:01:52,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 05:02:24] 2025-11-23 10:01:52,721 | INFO     | ready for new job
[2025-11-23 05:02:24] 2025-11-23 10:01:52,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 05:02:24] 2025-11-23 10:01:52,723 | INFO     | ***************************************
[2025-11-23 05:02:24] 2025-11-23 10:01:52,723 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 05:02:24] 2025-11-23 10:01:52,723 | INFO     | ***************************************
[2025-11-23 05:02:24] 2025-11-23 10:01:52,723 | INFO     | 
[2025-11-23 05:02:24] 2025-11-23 10:01:52,724 | INFO     | architecture information:
[2025-11-23 05:02:24] 2025-11-23 10:01:52,725 | INFO     | executing command: cat /etc/os-release
[2025-11-23 05:02:24] 2025-11-23 10:01:52,740 | INFO     | cat /etc/os-release:
[2025-11-23 05:02:24] NAME="CentOS Linux"
[2025-11-23 05:02:24] VERSION="7 (Core)"
[2025-11-23 05:02:24] ID="centos"
[2025-11-23 05:02:24] ID_LIKE="rhel fedora"
[2025-11-23 05:02:24] VERSION_ID="7"
[2025-11-23 05:02:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 05:02:24] ANSI_COLOR="0;31"
[2025-11-23 05:02:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 05:02:24] HOME_URL="https://www.centos.org/"
[2025-11-23 05:02:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 05:02:24] 
[2025-11-23 05:02:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 05:02:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 05:02:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 05:02:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 05:02:24] 
[2025-11-23 05:02:24] 2025-11-23 10:01:52,740 | INFO     | ***************************************
[2025-11-23 05:02:24] 2025-11-23 10:01:53,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 05:02:24] 2025-11-23 10:01:53,260 | INFO     | sufficient remaining disk space (28237103104 B)
[2025-11-23 05:02:24] 2025-11-23 10:01:53,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 05:02:24] 2025-11-23 10:01:53,261 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 05:02:24] 2025-11-23 10:01:53,261 | INFO     | update_server=False
[2025-11-23 05:02:24] 2025-11-23 10:01:53,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 05:02:24] 2025-11-23 10:01:53,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:02:24] 2025-11-23 10:01:53,262 | INFO     | aborting loop
[2025-11-23 05:02:24] 2025-11-23 10:01:53,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 05:02:24] 2025-11-23 10:01:53,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 05:02:24] 2025-11-23 10:01:54,012 | INFO     | all data control threads have been joined
[2025-11-23 05:02:24] 2025-11-23 10:01:54,012 | INFO     | all job control threads have been joined
[2025-11-23 05:02:24] 2025-11-23 10:01:54,074 | INFO     | all payload control threads have been joined
[2025-11-23 05:02:24] 2025-11-23 10:01:54,267 | INFO     | [job] retrieve thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,268 | INFO     | [job] job monitor thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,268 | INFO     | [job] queue monitor thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,308 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,328 | INFO     | [job] validate thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,361 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:54,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 05:02:24] 2025-11-23 10:01:54,876 | INFO     | [data] copytool_in thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,013 | INFO     | [job] control thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,017 | INFO     | [data] control thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,039 | INFO     | [payload] validate_post thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,080 | INFO     | [payload] control thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,555 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:55,751 | INFO     | [payload] failed_post thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:56,747 | INFO     | [data] copytool_out thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:01:57,269 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 05:02:24] 2025-11-23 10:02:02,336 | INFO     | [monitor] cgroup control has ended
[2025-11-23 05:02:24] 2025-11-23 10:02:02,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530204190528)>', '<ExcThread(monitor, started 140529157261056)>']
[2025-11-23 05:02:24] 2025-11-23 10:02:07,707 | INFO     | all workflow threads have been joined
[2025-11-23 05:02:24] 2025-11-23 10:02:07,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 05:02:24] 2025-11-23 10:02:07,707 | INFO     | traces error code: 0
[2025-11-23 05:02:24] 2025-11-23 10:02:07,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 05:02:24] 2025-11-23 10:02:24,108 | INFO     | PID=25152 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 05:02:24] 2025-11-23 10:02:24,109 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 05:02:24] 2025-11-23 10:02:24,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 05:02:24] 2025-11-23 10:02:24,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 05:02:24] 2025-11-23 10:02:24,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 05:02:24] 2025-11-23 10:02:24,109 | INFO     | [monitor] control thread has ended
[2025-11-23 05:02:24] 2025-11-23 10:02:24,198 [wrapper] ==== pilot stdout END ====
[2025-11-23 05:02:24] 2025-11-23 10:02:24,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 05:02:24] 2025-11-23 10:02:24,206 [wrapper] pilotpid: 25152
[2025-11-23 05:02:24] 2025-11-23 10:02:24,210 [wrapper] Pilot exit status: 0
[2025-11-23 05:02:24] 2025-11-23 10:02:24,224 [wrapper] pandaids: 6895334547
[2025-11-23 05:02:24] 2025-11-23 10:02:24,270 [wrapper] cleanup supervisor_pilot 24469 25153
[2025-11-23 05:02:24] 2025-11-23 10:02:24,274 [wrapper] Test setup, not cleaning
[2025-11-23 05:02:24] 2025-11-23 10:02:24,278 [wrapper] apfmon messages muted
[2025-11-23 05:02:24] 2025-11-23 10:02:24,281 [wrapper] ==== wrapper stdout END ====
[2025-11-23 05:02:24] 2025-11-23 10:02:24,285 [wrapper] ==== wrapper stderr END ====
[2025-11-23 05:02:24]  *** Error codes and diagnostics ***
[2025-11-23 05:02:24]     "exeErrorCode": 0,
[2025-11-23 05:02:24]     "exeErrorDiag": "",
[2025-11-23 05:02:24]     "pilotErrorCode": 0,
[2025-11-23 05:02:24]     "pilotErrorDiag": "",
[2025-11-23 05:02:24]  *** Listing of results directory ***
[2025-11-23 05:02:24] total 1315252
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:55 pilot3.tar.gz
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 22:57 queuedata.json
[2025-11-23 05:02:24] -rwx------ 1 boincer umatlas     36292 Nov 21 22:58 runpilot2-wrapper.sh
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas       100 Nov 22 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 05:02:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 21:58 run_atlas
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas       105 Nov 22 21:58 job.xml
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas 411415992 Nov 22 21:58 EVNT.47483658._000241.pool.root.1
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 21:58 start_atlas.sh
[2025-11-23 05:02:24] drwxrwx--x 2 boincer umatlas      4096 Nov 22 21:58 shared
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas    590091 Nov 22 21:58 input.tar.gz
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas         0 Nov 22 21:58 boinc_lockfile
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 21:58 pandaJob.out
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas        57 Nov 22 21:58 setup.sh.local
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas    989784 Nov 22 21:58 agis_schedconf.cvmfs.json
[2025-11-23 05:02:24] drwx------ 5 boincer umatlas      4096 Nov 22 21:58 pilot3
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas       532 Nov 23 04:54 boinc_task_state.xml
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas 920007325 Nov 23 05:01 HITS.47556137._002372.pool.root.1
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 05:01 init_data.xml
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas      1064 Nov 23 05:01 memory_monitor_summary.json
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas   1526164 Nov 23 05:01 agis_ddmendpoints.agis.ALL.json
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas   2179260 Nov 23 05:01 log.47556137._002372.job.log.tgz.1
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas      8678 Nov 23 05:01 heartbeat.json
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas        29 Nov 23 05:02 wrapper_checkpoint.txt
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 05:02 boinc_mmap_file
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas        95 Nov 23 05:02 pilot_heartbeat.json
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas       745 Nov 23 05:02 pilotlog.txt
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas   3557891 Nov 23 05:02 log.47556137._002372.job.log.1
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas       353 Nov 23 05:02 output.list
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas       620 Nov 23 05:02 runtime_log
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas   5754880 Nov 23 05:02 result.tar.gz
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 05:02 runtime_log.err
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas       670 Nov 23 05:02 FunLDmjwtg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwuJKDmcOdhom.diag
[2025-11-23 05:02:24] -rw-r--r-- 1 boincer umatlas     21332 Nov 23 05:02 stderr.txt
[2025-11-23 05:02:24] HITS file was successfully produced:
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas 920007325 Nov 23 05:01 shared/HITS.pool.root.1
[2025-11-23 05:02:24]  *** Contents of shared directory: ***
[2025-11-23 05:02:24] total 1306444
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas 411415992 Nov 22 21:58 ATLAS.root_0
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 21:58 start_atlas.sh
[2025-11-23 05:02:24] -rw-r--r-- 2 boincer umatlas    590091 Nov 22 21:58 input.tar.gz
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas 920007325 Nov 23 05:01 HITS.pool.root.1
[2025-11-23 05:02:24] -rw------- 1 boincer umatlas   5754880 Nov 23 05:02 result.tar.gz
05:02:26 (21442): run_atlas exited; CPU time 285944.996036
05:02:26 (21442): called boinc_finish(0)

</stderr_txt>
]]>

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