Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:01:13 (926839): wrapper (7.7.26015): starting
23:01:13 (926839): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:01:13] Arguments: --nthreads 8
[2025-11-22 23:01:13] Threads: 8
[2025-11-22 23:01:13] Checking for CVMFS
[2025-11-22 23:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:01:13] 2.13.3.0 13693 25221 359708 153195 1 680 29720076 40960001 20511 16776704 0 68501399 99.613 68723118 36382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 23:01:13] CVMFS is ok
[2025-11-22 23:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:01:13] Further information can be found at the LHC@home message board.
[2025-11-22 23:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:01:13] Checking for apptainer binary...
[2025-11-22 23:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:01:13] Running /usr/bin/apptainer --version
[2025-11-22 23:01:14] apptainer version 1.4.4-1.el9
[2025-11-22 23:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:01:14] c6-5-37-3.aglt2.org
[2025-11-22 23:01:14] apptainer works
[2025-11-22 23:01:14] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:01:14] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:01:14] Starting ATLAS job with PandaID=6895327974
[2025-11-22 23:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:28:51]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:28:51] 2025-11-24 14:27:59,246 | INFO     | sum of square deviations: 2597637160307.774
[2025-11-24 09:28:51] 2025-11-24 14:27:59,612 | INFO     | sum of deviations: 8649398334646.176
[2025-11-24 09:28:51] 2025-11-24 14:27:59,612 | INFO     | mean x: 1763932506.0743475
[2025-11-24 09:28:51] 2025-11-24 14:27:59,612 | INFO     | mean y: 2941839.2240275727
[2025-11-24 09:28:51] 2025-11-24 14:27:59,612 | INFO     | intersect: -5870455382.526542
[2025-11-24 09:28:51] 2025-11-24 14:27:59,614 | INFO     | chi2: 11.227930059455703
[2025-11-24 09:28:51] 2025-11-24 14:27:59,621 | INFO     | sum of square deviations: 2578500036062.9033
[2025-11-24 09:28:51] 2025-11-24 14:27:59,747 | INFO     | sum of deviations: 9392883436699.457
[2025-11-24 09:28:51] 2025-11-24 14:27:59,748 | INFO     | mean x: 1763932353.581935
[2025-11-24 09:28:51] 2025-11-24 14:27:59,748 | INFO     | mean y: 2947762.9792694966
[2025-11-24 09:28:51] 2025-11-24 14:27:59,748 | INFO     | intersect: -6422652685.224042
[2025-11-24 09:28:51] 2025-11-24 14:27:59,750 | INFO     | chi2: 7.657482331833722
[2025-11-24 09:28:51] 2025-11-24 14:27:59,750 | INFO     | current chi2=7.657482331833722 (change=31.799696905086222 %)
[2025-11-24 09:28:51] 2025-11-24 14:27:59,756 | INFO     | sum of square deviations: 2559457146142.796
[2025-11-24 09:28:51] 2025-11-24 14:28:00,259 | INFO     | sum of deviations: 10055416006955.385
[2025-11-24 09:28:51] 2025-11-24 14:28:00,355 | INFO     | mean x: 1763932201.0895596
[2025-11-24 09:28:51] 2025-11-24 14:28:00,355 | INFO     | mean y: 2953067.406729342
[2025-11-24 09:28:51] 2025-11-24 14:28:00,355 | INFO     | intersect: -6927060242.935456
[2025-11-24 09:28:51] 2025-11-24 14:28:00,357 | INFO     | chi2: 4.646465222525448
[2025-11-24 09:28:51] 2025-11-24 14:28:00,357 | INFO     | current chi2=4.646465222525448 (change=39.32124135358249 %)
[2025-11-24 09:28:51] 2025-11-24 14:28:00,494 | INFO     | time since job start (123972s) is within the limit (172800.0s)
[2025-11-24 09:28:51] 2025-11-24 14:28:00,502 | INFO     | sum of square deviations: 2540508134831.145
[2025-11-24 09:28:51] 2025-11-24 14:28:01,229 | INFO     | sum of deviations: 10299165236489.805
[2025-11-24 09:28:51] 2025-11-24 14:28:01,230 | INFO     | mean x: 1763932048.5967262
[2025-11-24 09:28:51] 2025-11-24 14:28:01,230 | INFO     | mean y: 2955028.603670635
[2025-11-24 09:28:51] 2025-11-24 14:28:01,230 | INFO     | intersect: -7147987487.722938
[2025-11-24 09:28:51] 2025-11-24 14:28:01,232 | INFO     | chi2: 4.112951444727178
[2025-11-24 09:28:51] 2025-11-24 14:28:01,232 | INFO     | current chi2=4.112951444727178 (change=11.48214292473051 %)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,232 | INFO     | right removable region: 2015
[2025-11-24 09:28:51] 2025-11-24 14:28:01,234 | INFO     | sum of square deviations: 2578496227222.899
[2025-11-24 09:28:51] 2025-11-24 14:28:01,296 | INFO     | sum of deviations: 7924273143449.541
[2025-11-24 09:28:51] 2025-11-24 14:28:01,296 | INFO     | mean x: 1763932658.581935
[2025-11-24 09:28:51] 2025-11-24 14:28:01,296 | INFO     | mean y: 2947615.304047384
[2025-11-24 09:28:51] 2025-11-24 14:28:01,296 | INFO     | intersect: -5417996594.612011
[2025-11-24 09:28:51] 2025-11-24 14:28:01,298 | INFO     | chi2: 8.082414835900465
[2025-11-24 09:28:51] 2025-11-24 14:28:01,298 | INFO     | current chi2=8.082414835900465 (change=28.01509456238743 %)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,300 | INFO     | sum of square deviations: 2559451753257.8545
[2025-11-24 09:28:51] 2025-11-24 14:28:01,516 | INFO     | sum of deviations: 7715564219197.873
[2025-11-24 09:28:51] 2025-11-24 14:28:01,522 | INFO     | mean x: 1763932811.0806532
[2025-11-24 09:28:51] 2025-11-24 14:28:01,522 | INFO     | mean y: 2949285.4547253833
[2025-11-24 09:28:51] 2025-11-24 14:28:01,522 | INFO     | intersect: -5314492961.66697
[2025-11-24 09:28:51] 2025-11-24 14:28:01,528 | INFO     | chi2: 7.8291969049509476
[2025-11-24 09:28:51] 2025-11-24 14:28:01,529 | INFO     | current chi2=7.8291969049509476 (change=3.132948952641907 %)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,529 | INFO     | left removable region: 20
[2025-11-24 09:28:51] 2025-11-24 14:28:01,531 | INFO     | sum of square deviations: 2461933240911.294
[2025-11-24 09:28:51] 2025-11-24 14:28:01,634 | INFO     | monitor loop #6891: job 0:6895327974 is in state 'finished'
[2025-11-24 09:28:51] 2025-11-24 14:28:01,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,828 | INFO     | sum of deviations: 9110534990064.727
[2025-11-24 09:28:51] 2025-11-24 14:28:01,828 | INFO     | mean x: 1763932628.1112783
[2025-11-24 09:28:51] 2025-11-24 14:28:01,829 | INFO     | mean y: 2965278.4967418546
[2025-11-24 09:28:51] 2025-11-24 14:28:01,829 | INFO     | intersect: -6524575623.69934
[2025-11-24 09:28:51] 2025-11-24 14:28:01,831 | INFO     | chi2: 0.5264292227341827
[2025-11-24 09:28:51] 2025-11-24 14:28:01,831 | INFO     | current memory leak: 3.70 B/s (using 1995 data points, chi2=0.53)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | could have reported an average CPU frequency of 3003 MHz (71 samples)
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | ..............................
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . Timing measurements:
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . get job = 0 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . initial setup = 4 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . payload setup = 23 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . stage-in = 0 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . payload execution = 123867 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . stage-out = 9 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,833 | INFO     | . log creation = 3 s
[2025-11-24 09:28:51] 2025-11-24 14:28:01,834 | INFO     | ..............................
[2025-11-24 09:28:51] 2025-11-24 14:28:02,049 | INFO     | 
[2025-11-24 09:28:51] 2025-11-24 14:28:02,049 | INFO     | job summary report
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | --------------------------------------------------
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | PanDA job id: 6895327974
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | task id: 47556137
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | errors: (none)
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 09:28:51] 2025-11-24 14:28:02,050 | INFO     | pilot state: finished 
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | transexitcode: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | exeerrorcode: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | exeerrordiag: 
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | exitcode: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | exitmsg: OK
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | cpuconsumptiontime: 240007 s
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | nevents: 1000
[2025-11-24 09:28:51] 2025-11-24 14:28:02,051 | INFO     | neventsw: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | pid: 938450
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | pgrp: 938450
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | corecount: 8
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | event service: False
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | sizes: {0: 2298802, 1: 2298802, 12: 2298830, 18: 2299120, 23: 2299148, 123895: 2380607, 123906: 2390392, 123909: 2390448, 123934: 2390694}
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | --------------------------------------------------
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | 
[2025-11-24 09:28:51] 2025-11-24 14:28:02,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | job 6895327974 has completed (purged errors)
[2025-11-24 09:28:51] 2025-11-24 14:28:02,102 | INFO     | overall cleanup function is called
[2025-11-24 09:28:51] 2025-11-24 14:28:03,119 | INFO     | --- collectZombieJob: --- 10, [938450]
[2025-11-24 09:28:51] 2025-11-24 14:28:03,119 | INFO     | zombie collector waiting for pid 938450
[2025-11-24 09:28:51] 2025-11-24 14:28:03,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 09:28:51] 2025-11-24 14:28:03,120 | INFO     | collected zombie processes
[2025-11-24 09:28:51] 2025-11-24 14:28:03,120 | INFO     | will attempt to kill all subprocesses of pid=938450
[2025-11-24 09:28:51] 2025-11-24 14:28:04,285 | INFO     | process IDs to be killed: [938450] (in reverse order)
[2025-11-24 09:28:51] 2025-11-24 14:28:04,520 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 09:28:51] 2025-11-24 14:28:04,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 09:28:51] 2025-11-24 14:28:04,649 | INFO     | did not find any defunct processes belonging to 938450
[2025-11-24 09:28:51] 2025-11-24 14:28:05,027 | INFO     | did not find any defunct processes belonging to 938450
[2025-11-24 09:28:51] 2025-11-24 14:28:05,041 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 09:28:51] 2025-11-24 14:28:05,042 | INFO     | ready for new job
[2025-11-24 09:28:51] 2025-11-24 14:28:05,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 09:28:51] 2025-11-24 14:28:05,128 | INFO     | ***************************************
[2025-11-24 09:28:51] 2025-11-24 14:28:05,129 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 09:28:51] 2025-11-24 14:28:05,129 | INFO     | ***************************************
[2025-11-24 09:28:51] 2025-11-24 14:28:05,129 | INFO     | 
[2025-11-24 09:28:51] 2025-11-24 14:28:05,132 | INFO     | architecture information:
[2025-11-24 09:28:51] 2025-11-24 14:28:05,172 | INFO     | executing command: cat /etc/os-release
[2025-11-24 09:28:51] 2025-11-24 14:28:05,308 | INFO     | cat /etc/os-release:
[2025-11-24 09:28:51] NAME="CentOS Linux"
[2025-11-24 09:28:51] VERSION="7 (Core)"
[2025-11-24 09:28:51] ID="centos"
[2025-11-24 09:28:51] ID_LIKE="rhel fedora"
[2025-11-24 09:28:51] VERSION_ID="7"
[2025-11-24 09:28:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 09:28:51] ANSI_COLOR="0;31"
[2025-11-24 09:28:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 09:28:51] HOME_URL="https://www.centos.org/"
[2025-11-24 09:28:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 09:28:51] 
[2025-11-24 09:28:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 09:28:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 09:28:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 09:28:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 09:28:51] 
[2025-11-24 09:28:51] 2025-11-24 14:28:05,309 | INFO     | ***************************************
[2025-11-24 09:28:51] 2025-11-24 14:28:05,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 09:28:51] 2025-11-24 14:28:05,865 | INFO     | sufficient remaining disk space (69972525056 B)
[2025-11-24 09:28:51] 2025-11-24 14:28:05,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:28:51] 2025-11-24 14:28:05,865 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:28:51] 2025-11-24 14:28:05,865 | INFO     | update_server=False
[2025-11-24 09:28:51] 2025-11-24 14:28:05,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:28:51] 2025-11-24 14:28:05,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:28:51] 2025-11-24 14:28:05,866 | INFO     | aborting loop
[2025-11-24 09:28:51] 2025-11-24 14:28:05,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:28:51] 2025-11-24 14:28:06,359 | INFO     | all data control threads have been joined
[2025-11-24 09:28:51] 2025-11-24 14:28:06,714 | INFO     | all payload control threads have been joined
[2025-11-24 09:28:51] 2025-11-24 14:28:06,841 | INFO     | all job control threads have been joined
[2025-11-24 09:28:51] 2025-11-24 14:28:06,872 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:06,873 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:28:51] 2025-11-24 14:28:07,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:28:51] 2025-11-24 14:28:07,269 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,284 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,372 | INFO     | [data] control thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,582 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,600 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,721 | INFO     | [payload] control thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:07,847 | INFO     | [job] control thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:08,254 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:08,321 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:08,331 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:08,346 | INFO     | [job] validate thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:08,350 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:09,148 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:09,946 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:28:51] 2025-11-24 14:28:37,832 | INFO     | PID=931368 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 09:28:51] 2025-11-24 14:28:37,833 | INFO     | .. there are 30 such processes running
[2025-11-24 09:28:51] 2025-11-24 14:28:37,833 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:28:51] 2025-11-24 14:28:37,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:28:51] 2025-11-24 14:28:37,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:28:51] 2025-11-24 14:28:43,974 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:28:51] 2025-11-24 14:28:45,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346196641600)>', '<ExcThread(monitor, started 140345706804992)>']
[2025-11-24 09:28:51] 2025-11-24 14:28:45,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:28:51] 2025-11-24 14:28:45,953 | INFO     | [monitor] control thread has ended
[2025-11-24 09:28:51] 2025-11-24 14:28:50,348 | INFO     | all workflow threads have been joined
[2025-11-24 09:28:51] 2025-11-24 14:28:50,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:28:51] 2025-11-24 14:28:50,348 | INFO     | traces error code: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:50,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:28:51] 2025-11-24 14:28:50,944 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:28:51] 2025-11-24 14:28:50,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:28:51] 2025-11-24 14:28:50,949 [wrapper] pilotpid: 931368
[2025-11-24 09:28:51] 2025-11-24 14:28:50,951 [wrapper] Pilot exit status: 0
[2025-11-24 09:28:51] 2025-11-24 14:28:50,990 [wrapper] pandaids: 6895327974
[2025-11-24 09:28:51] 2025-11-24 14:28:51,191 [wrapper] cleanup supervisor_pilot 3053127 931369
[2025-11-24 09:28:51] 2025-11-24 14:28:51,194 [wrapper] Test setup, not cleaning
[2025-11-24 09:28:51] 2025-11-24 14:28:51,196 [wrapper] apfmon messages muted
[2025-11-24 09:28:51] 2025-11-24 14:28:51,199 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:28:51] 2025-11-24 14:28:51,201 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:28:51]  *** Error codes and diagnostics ***
[2025-11-24 09:28:51]     "exeErrorCode": 0,
[2025-11-24 09:28:51]     "exeErrorDiag": "",
[2025-11-24 09:28:51]     "pilotErrorCode": 0,
[2025-11-24 09:28:51]     "pilotErrorDiag": "",
[2025-11-24 09:28:51]  *** Listing of results directory ***
[2025-11-24 09:28:51] total 1342140
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 10:53 pilot3.tar.gz
[2025-11-24 09:28:51] -rwx------. 1 boincer umatlas     36292 Nov 21 11:07 runpilot2-wrapper.sh
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 11:07 queuedata.json
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas       100 Nov 22 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:28:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 23:01 run_atlas
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas       105 Nov 22 23:01 job.xml
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas 411509342 Nov 22 23:01 EVNT.47483658._000056.pool.root.1
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:01 start_atlas.sh
[2025-11-24 09:28:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 23:01 shared
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 23:01 input.tar.gz
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas         0 Nov 22 23:01 boinc_lockfile
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas      2783 Nov 22 23:01 pandaJob.out
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas        57 Nov 22 23:01 setup.sh.local
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas    989784 Nov 22 23:01 agis_schedconf.cvmfs.json
[2025-11-24 09:28:51] drwx------. 5 boincer umatlas      4096 Nov 22 23:01 pilot3
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas       533 Nov 24 09:05 boinc_task_state.xml
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas      6846 Nov 24 09:22 init_data.xml
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas 923450678 Nov 24 09:25 HITS.47556137._000553.pool.root.1
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas      1070 Nov 24 09:27 memory_monitor_summary.json
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas   1516227 Nov 24 09:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas   2844480 Nov 24 09:27 log.47556137._000553.job.log.tgz.1
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas      8634 Nov 24 09:28 heartbeat.json
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas        95 Nov 24 09:28 pilot_heartbeat.json
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 09:28 boinc_mmap_file
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas        29 Nov 24 09:28 wrapper_checkpoint.txt
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas      4823 Nov 24 09:28 pilotlog.txt
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas  14892836 Nov 24 09:28 log.47556137._000553.job.log.1
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas       353 Nov 24 09:28 output.list
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas       620 Nov 24 09:28 runtime_log
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas  17756160 Nov 24 09:28 result.tar.gz
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas      9349 Nov 24 09:28 runtime_log.err
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas       668 Nov 24 09:28 MDRMDmoqig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMXJKDmnf5yXo.diag
[2025-11-24 09:28:51] -rw-r--r--. 1 boincer umatlas     21221 Nov 24 09:28 stderr.txt
[2025-11-24 09:28:51] HITS file was successfully produced:
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas 923450678 Nov 24 09:25 shared/HITS.pool.root.1
[2025-11-24 09:28:51]  *** Contents of shared directory: ***
[2025-11-24 09:28:51] total 1321620
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas 411509342 Nov 22 23:01 ATLAS.root_0
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:01 start_atlas.sh
[2025-11-24 09:28:51] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 23:01 input.tar.gz
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas 923450678 Nov 24 09:25 HITS.pool.root.1
[2025-11-24 09:28:51] -rw-------. 1 boincer umatlas  17756160 Nov 24 09:28 result.tar.gz
09:28:52 (926839): run_atlas exited; CPU time 242639.522105
09:28:52 (926839): called boinc_finish(0)

</stderr_txt>
]]>

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