Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:41 (22652): wrapper (7.7.26015): starting
20:47:41 (22652): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 20:47:41] Arguments: --nthreads 12
[2025-11-22 20:47:41] Threads: 12
[2025-11-22 20:47:41] Checking for CVMFS
[2025-11-22 20:47:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:47:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:47:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:47:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:47:42] 2.11.2.0 2933 282721 92512 153192 0 58 13063235 20275201 1 130560 2 126690046 99.962 17028087 14614 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:47:42] CVMFS is ok
[2025-11-22 20:47:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:47:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:47:42] Further information can be found at the LHC@home message board.
[2025-11-22 20:47:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:47:42] Checking for apptainer binary...
[2025-11-22 20:47:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:47:42] Running /usr/bin/apptainer --version
[2025-11-22 20:47:42] apptainer version 1.3.2-1.el7
[2025-11-22 20:47:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:47:43] c-205-15.aglt2.org
[2025-11-22 20:47:43] apptainer works
[2025-11-22 20:47:43] Set ATHENA_PROC_NUMBER=12
[2025-11-22 20:47:43] Set ATHENA_CORE_NUMBER=12
[2025-11-22 20:47:43] Starting ATLAS job with PandaID=6895334468
[2025-11-22 20:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:55:46]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:55:46] 2025-11-23 08:54:45,466 | INFO     | monitor loop #1910: job 0:6895334468 is in state 'finished'
[2025-11-23 03:55:46] 2025-11-23 08:54:45,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:55:46] 2025-11-23 08:54:45,999 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 03:55:46] 2025-11-23 08:54:46,002 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-23 03:55:46] 2025-11-23 08:54:46,005 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895334468/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,005 | INFO     | extracted standard info from prmon json
[2025-11-23 03:55:46] 2025-11-23 08:54:46,006 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:55:46] 2025-11-23 08:54:46,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:55:46] 2025-11-23 08:54:46,012 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:55:46] 2025-11-23 08:54:46,013 | INFO     | sum of square deviations: 22973252844.05708
[2025-11-23 03:55:46] 2025-11-23 08:54:46,017 | INFO     | sum of deviations: 382319416714.25726
[2025-11-23 03:55:46] 2025-11-23 08:54:46,017 | INFO     | mean x: 1763875286.7714286
[2025-11-23 03:55:46] 2025-11-23 08:54:46,017 | INFO     | mean y: 3431524.8047619048
[2025-11-23 03:55:46] 2025-11-23 08:54:46,017 | INFO     | intersect: -29350869120.939274
[2025-11-23 03:55:46] 2025-11-23 08:54:46,017 | INFO     | chi2: 5.890962585523331
[2025-11-23 03:55:46] 2025-11-23 08:54:46,018 | INFO     | sum of square deviations: 22162537528.68419
[2025-11-23 03:55:46] 2025-11-23 08:54:46,022 | INFO     | sum of deviations: 545802138302.6944
[2025-11-23 03:55:46] 2025-11-23 08:54:46,022 | INFO     | mean x: 1763875134.2746987
[2025-11-23 03:55:46] 2025-11-23 08:54:46,022 | INFO     | mean y: 3462245.151807229
[2025-11-23 03:55:46] 2025-11-23 08:54:46,022 | INFO     | intersect: -43435914619.52623
[2025-11-23 03:55:46] 2025-11-23 08:54:46,022 | INFO     | chi2: 2.8330357147575733
[2025-11-23 03:55:46] 2025-11-23 08:54:46,023 | INFO     | current chi2=2.8330357147575733 (change=51.908781058640905 %)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,023 | INFO     | sum of square deviations: 21371099829.356068
[2025-11-23 03:55:46] 2025-11-23 08:54:46,027 | INFO     | sum of deviations: 567405953107.5806
[2025-11-23 03:55:46] 2025-11-23 08:54:46,027 | INFO     | mean x: 1763874981.7756097
[2025-11-23 03:55:46] 2025-11-23 08:54:46,027 | INFO     | mean y: 3466370.7780487803
[2025-11-23 03:55:46] 2025-11-23 08:54:46,027 | INFO     | intersect: -46827682853.56968
[2025-11-23 03:55:46] 2025-11-23 08:54:46,027 | INFO     | chi2: 2.6121752253384045
[2025-11-23 03:55:46] 2025-11-23 08:54:46,028 | INFO     | current chi2=2.6121752253384045 (change=7.795894992381632 %)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,028 | INFO     | right removable region: 409
[2025-11-23 03:55:46] 2025-11-23 08:54:46,028 | INFO     | sum of square deviations: 22162493364.231308
[2025-11-23 03:55:46] 2025-11-23 08:54:46,032 | INFO     | sum of deviations: 237593757439.22638
[2025-11-23 03:55:46] 2025-11-23 08:54:46,032 | INFO     | mean x: 1763875439.272289
[2025-11-23 03:55:46] 2025-11-23 08:54:46,032 | INFO     | mean y: 3458671.2457831325
[2025-11-23 03:55:46] 2025-11-23 08:54:46,032 | INFO     | intersect: -18906227454.04569
[2025-11-23 03:55:46] 2025-11-23 08:54:46,033 | INFO     | chi2: 3.4334818044202615
[2025-11-23 03:55:46] 2025-11-23 08:54:46,033 | INFO     | current chi2=3.4334818044202615 (change=41.71611592207653 %)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,033 | INFO     | sum of square deviations: 21371036937.90485
[2025-11-23 03:55:46] 2025-11-23 08:54:46,037 | INFO     | sum of deviations: 204906259875.19504
[2025-11-23 03:55:46] 2025-11-23 08:54:46,037 | INFO     | mean x: 1763875591.7731707
[2025-11-23 03:55:46] 2025-11-23 08:54:46,037 | INFO     | mean y: 3464962.926829268
[2025-11-23 03:55:46] 2025-11-23 08:54:46,037 | INFO     | intersect: -16908636749.570618
[2025-11-23 03:55:46] 2025-11-23 08:54:46,038 | INFO     | chi2: 3.3792865989630654
[2025-11-23 03:55:46] 2025-11-23 08:54:46,038 | INFO     | current chi2=3.3792865989630654 (change=1.5784328720608123 %)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,038 | INFO     | left removable region: 20
[2025-11-23 03:55:46] 2025-11-23 08:54:46,038 | INFO     | sum of square deviations: 18252503038.015358
[2025-11-23 03:55:46] 2025-11-23 08:54:46,042 | INFO     | sum of deviations: 351329815503.4343
[2025-11-23 03:55:46] 2025-11-23 08:54:46,042 | INFO     | mean x: 1763875561.2776349
[2025-11-23 03:55:46] 2025-11-23 08:54:46,042 | INFO     | mean y: 3508692.820051414
[2025-11-23 03:55:46] 2025-11-23 08:54:46,042 | INFO     | intersect: -33948112858.701134
[2025-11-23 03:55:46] 2025-11-23 08:54:46,042 | INFO     | chi2: 0.04908842882026767
[2025-11-23 03:55:46] 2025-11-23 08:54:46,043 | INFO     | current memory leak: 19.25 B/s (using 389 data points, chi2=0.05)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,043 | INFO     | could have reported an average CPU frequency of 2403 MHz (18 samples)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,043 | INFO     | ..............................
[2025-11-23 03:55:46] 2025-11-23 08:54:46,043 | INFO     | . Timing measurements:
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . get job = 0 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . initial setup = 2 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . payload setup = 7 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . stage-in = 0 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . payload execution = 25569 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . stage-out = 3 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | . log creation = 0 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,044 | INFO     | ..............................
[2025-11-23 03:55:46] 2025-11-23 08:54:46,125 | INFO     | 
[2025-11-23 03:55:46] 2025-11-23 08:54:46,126 | INFO     | job summary report
[2025-11-23 03:55:46] 2025-11-23 08:54:46,126 | INFO     | --------------------------------------------------
[2025-11-23 03:55:46] 2025-11-23 08:54:46,126 | INFO     | PanDA job id: 6895334468
[2025-11-23 03:55:46] 2025-11-23 08:54:46,126 | INFO     | task id: 47556137
[2025-11-23 03:55:46] 2025-11-23 08:54:46,126 | INFO     | errors: (none)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | pilot state: finished 
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | transexitcode: 0
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | exeerrorcode: 0
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | exeerrordiag: 
[2025-11-23 03:55:46] 2025-11-23 08:54:46,127 | INFO     | exitcode: 0
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | exitmsg: OK
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | cpuconsumptiontime: 294454 s
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | nevents: 1000
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | neventsw: 0
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | pid: 319
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | pgrp: 319
[2025-11-23 03:55:46] 2025-11-23 08:54:46,128 | INFO     | corecount: 12
[2025-11-23 03:55:46] 2025-11-23 08:54:46,129 | INFO     | event service: False
[2025-11-23 03:55:46] 2025-11-23 08:54:46,129 | INFO     | sizes: {0: 2298579, 1: 2298834, 6: 2299096, 12: 2299124, 25581: 2336276, 25582: 2336275, 25586: 2345509, 25592: 2345699}
[2025-11-23 03:55:46] 2025-11-23 08:54:46,129 | INFO     | --------------------------------------------------
[2025-11-23 03:55:46] 2025-11-23 08:54:46,129 | INFO     | 
[2025-11-23 03:55:46] 2025-11-23 08:54:46,129 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 03:55:46] 2025-11-23 08:54:46,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:55:46] 2025-11-23 08:54:46,156 | INFO     | job 6895334468 has completed (purged errors)
[2025-11-23 03:55:46] 2025-11-23 08:54:46,156 | INFO     | overall cleanup function is called
[2025-11-23 03:55:46] 2025-11-23 08:54:47,171 | INFO     | --- collectZombieJob: --- 10, [319]
[2025-11-23 03:55:46] 2025-11-23 08:54:47,171 | INFO     | zombie collector waiting for pid 319
[2025-11-23 03:55:46] 2025-11-23 08:54:47,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:55:46] 2025-11-23 08:54:47,179 | INFO     | collected zombie processes
[2025-11-23 03:55:46] 2025-11-23 08:54:47,179 | INFO     | will attempt to kill all subprocesses of pid=319
[2025-11-23 03:55:46] 2025-11-23 08:54:47,270 | INFO     | process IDs to be killed: [319] (in reverse order)
[2025-11-23 03:55:46] 2025-11-23 08:54:47,323 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:55:46] 2025-11-23 08:54:47,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:55:46] 2025-11-23 08:54:47,326 | INFO     | did not find any defunct processes belonging to 319
[2025-11-23 03:55:46] 2025-11-23 08:54:47,329 | INFO     | did not find any defunct processes belonging to 319
[2025-11-23 03:55:46] 2025-11-23 08:54:47,332 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:55:46] 2025-11-23 08:54:47,332 | INFO     | ready for new job
[2025-11-23 03:55:46] 2025-11-23 08:54:47,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:55:46] 2025-11-23 08:54:47,334 | INFO     | ***************************************
[2025-11-23 03:55:46] 2025-11-23 08:54:47,335 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:55:46] 2025-11-23 08:54:47,335 | INFO     | ***************************************
[2025-11-23 03:55:46] 2025-11-23 08:54:47,335 | INFO     | 
[2025-11-23 03:55:46] 2025-11-23 08:54:47,335 | INFO     | architecture information:
[2025-11-23 03:55:46] 2025-11-23 08:54:47,336 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:55:46] 2025-11-23 08:54:47,351 | INFO     | cat /etc/os-release:
[2025-11-23 03:55:46] NAME="CentOS Linux"
[2025-11-23 03:55:46] VERSION="7 (Core)"
[2025-11-23 03:55:46] ID="centos"
[2025-11-23 03:55:46] ID_LIKE="rhel fedora"
[2025-11-23 03:55:46] VERSION_ID="7"
[2025-11-23 03:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:55:46] ANSI_COLOR="0;31"
[2025-11-23 03:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:55:46] HOME_URL="https://www.centos.org/"
[2025-11-23 03:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:55:46] 
[2025-11-23 03:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:55:46] 
[2025-11-23 03:55:46] 2025-11-23 08:54:47,352 | INFO     | ***************************************
[2025-11-23 03:55:46] 2025-11-23 08:54:47,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 03:55:46] 2025-11-23 08:54:47,871 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-23 03:55:46] 2025-11-23 08:54:47,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:55:46] 2025-11-23 08:54:47,871 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:55:46] 2025-11-23 08:54:47,871 | INFO     | update_server=False
[2025-11-23 03:55:46] 2025-11-23 08:54:47,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:55:46] 2025-11-23 08:54:47,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:55:46] 2025-11-23 08:54:47,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:55:46] 2025-11-23 08:54:47,904 | INFO     | all job control threads have been joined
[2025-11-23 03:55:46] 2025-11-23 08:54:47,969 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 03:55:46] 2025-11-23 08:54:47,969 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 03:55:46] 2025-11-23 08:54:47,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:55:46] 2025-11-23 08:54:47,970 | INFO     | will abort loop
[2025-11-23 03:55:46] 2025-11-23 08:54:48,873 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:48,877 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:48,909 | INFO     | [job] control thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:48,956 | INFO     | all data control threads have been joined
[2025-11-23 03:55:46] 2025-11-23 08:54:48,973 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:48,975 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,093 | INFO     | all payload control threads have been joined
[2025-11-23 03:55:46] 2025-11-23 08:54:49,394 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,635 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,784 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,875 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:49,961 | INFO     | [data] control thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:50,098 | INFO     | [payload] control thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:50,168 | INFO     | [job] validate thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:50,215 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:50,254 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:54:50,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:55:46] 2025-11-23 08:54:54,433 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:55:46] 2025-11-23 08:55:17,497 | INFO     | PID=26338 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 03:55:46] 2025-11-23 08:55:17,498 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:55:46] 2025-11-23 08:55:17,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:55:46] 2025-11-23 08:55:17,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:55:46] 2025-11-23 08:55:39,758 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:55:46] 2025-11-23 08:55:41,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663210440512)>', '<ExcThread(monitor, started 140662099920640)>']
[2025-11-23 03:55:46] 2025-11-23 08:55:41,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:55:46] 2025-11-23 08:55:41,620 | INFO     | [monitor] control thread has ended
[2025-11-23 03:55:46] 2025-11-23 08:55:46,404 | INFO     | all workflow threads have been joined
[2025-11-23 03:55:46] 2025-11-23 08:55:46,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:55:46] 2025-11-23 08:55:46,404 | INFO     | traces error code: 0
[2025-11-23 03:55:46] 2025-11-23 08:55:46,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:55:46] 2025-11-23 08:55:46,500 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:55:46] 2025-11-23 08:55:46,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:55:46] 2025-11-23 08:55:46,508 [wrapper] pilotpid: 26338
[2025-11-23 03:55:46] 2025-11-23 08:55:46,512 [wrapper] Pilot exit status: 0
[2025-11-23 03:55:46] 2025-11-23 08:55:46,525 [wrapper] pandaids: 6895334468
[2025-11-23 03:55:46] 2025-11-23 08:55:46,575 [wrapper] cleanup supervisor_pilot 24495 26339
[2025-11-23 03:55:46] 2025-11-23 08:55:46,579 [wrapper] Test setup, not cleaning
[2025-11-23 03:55:46] 2025-11-23 08:55:46,583 [wrapper] apfmon messages muted
[2025-11-23 03:55:46] 2025-11-23 08:55:46,587 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:55:46] 2025-11-23 08:55:46,591 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:55:46]  *** Error codes and diagnostics ***
[2025-11-23 03:55:46]     "exeErrorCode": 0,
[2025-11-23 03:55:46]     "exeErrorDiag": "",
[2025-11-23 03:55:46]     "pilotErrorCode": 0,
[2025-11-23 03:55:46]     "pilotErrorDiag": "",
[2025-11-23 03:55:46]  *** Listing of results directory ***
[2025-11-23 03:55:46] total 1316600
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:44 pilot3.tar.gz
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 22:47 queuedata.json
[2025-11-23 03:55:46] -rwx------ 1 boincer umatlas     36292 Nov 21 22:49 runpilot2-wrapper.sh
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas       100 Nov 22 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:55:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 20:47 run_atlas
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas       105 Nov 22 20:47 job.xml
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas 411318937 Nov 22 20:47 EVNT.47483658._000236.pool.root.1
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:47 start_atlas.sh
[2025-11-23 03:55:46] drwxrwx--x 2 boincer umatlas      4096 Nov 22 20:47 shared
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 20:47 input.tar.gz
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas         0 Nov 22 20:47 boinc_lockfile
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 20:47 pandaJob.out
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas        57 Nov 22 20:47 setup.sh.local
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas    989784 Nov 22 20:47 agis_schedconf.cvmfs.json
[2025-11-23 03:55:46] drwx------ 5 boincer umatlas      4096 Nov 22 20:47 pilot3
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas       532 Nov 23 03:46 boinc_task_state.xml
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 03:54 init_data.xml
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas 921487833 Nov 23 03:54 HITS.47556137._002330.pool.root.1
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas      1073 Nov 23 03:54 memory_monitor_summary.json
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas   1526164 Nov 23 03:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas   2166445 Nov 23 03:54 log.47556137._002330.job.log.tgz.1
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas      8664 Nov 23 03:54 heartbeat.json
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas        95 Nov 23 03:55 pilot_heartbeat.json
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas        29 Nov 23 03:55 wrapper_checkpoint.txt
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 03:55 boinc_mmap_file
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas      4932 Nov 23 03:55 pilotlog.txt
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas   3568482 Nov 23 03:55 log.47556137._002330.job.log.1
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas       353 Nov 23 03:55 output.list
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas       620 Nov 23 03:55 runtime_log
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas   5754880 Nov 23 03:55 result.tar.gz
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 03:55 runtime_log.err
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas       670 Nov 23 03:55 16nLDm4ntg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8vHKDmeYf09m.diag
[2025-11-23 03:55:46] -rw-r--r-- 1 boincer umatlas     21303 Nov 23 03:55 stderr.txt
[2025-11-23 03:55:46] HITS file was successfully produced:
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas 921487833 Nov 23 03:54 shared/HITS.pool.root.1
[2025-11-23 03:55:46]  *** Contents of shared directory: ***
[2025-11-23 03:55:46] total 1307792
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas 411318937 Nov 22 20:47 ATLAS.root_0
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:47 start_atlas.sh
[2025-11-23 03:55:46] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 20:47 input.tar.gz
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas 921487833 Nov 23 03:54 HITS.pool.root.1
[2025-11-23 03:55:46] -rw------- 1 boincer umatlas   5754880 Nov 23 03:55 result.tar.gz
03:55:47 (22652): run_atlas exited; CPU time 288259.190352
03:55:47 (22652): called boinc_finish(0)

</stderr_txt>
]]>

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