Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:13 (1364250): wrapper (7.7.26015): starting
20:58:13 (1364250): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 20:58:13] Arguments: --nthreads 8
[2025-11-22 20:58:13] Threads: 8
[2025-11-22 20:58:13] Checking for CVMFS
[2025-11-22 20:58:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:58:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:58:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:58:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:58:16] 2.13.2.0 11163 32354 228788 153192 3 431 26857329 40960001 13392 16776704 0 26170620 99.629 21551370 36689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:58:16] CVMFS is ok
[2025-11-22 20:58:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:58:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:58:16] Further information can be found at the LHC@home message board.
[2025-11-22 20:58:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:58:16] Checking for apptainer binary...
[2025-11-22 20:58:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:58:16] Running /usr/bin/apptainer --version
[2025-11-22 20:58:16] apptainer version 1.4.4-1.el9
[2025-11-22 20:58:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:58:17] c-210-35-1.aglt2.org
[2025-11-22 20:58:17] apptainer works
[2025-11-22 20:58:17] Set ATHENA_PROC_NUMBER=8
[2025-11-22 20:58:17] Set ATHENA_CORE_NUMBER=8
[2025-11-22 20:58:17] Starting ATLAS job with PandaID=6895326410
[2025-11-22 20:58:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 08:08:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 08:08:18] 2025-11-24 13:07:40,620 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 08:08:18] 2025-11-24 13:07:40,632 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2781.593178571429
[2025-11-24 08:08:18] 2025-11-24 13:07:40,647 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895326410/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 08:08:18] 2025-11-24 13:07:40,648 | INFO     | extracted standard info from prmon json
[2025-11-24 08:08:18] 2025-11-24 13:07:40,648 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 08:08:18] 2025-11-24 13:07:40,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 08:08:18] 2025-11-24 13:07:40,751 | INFO     | fitting pss+swap vs Time
[2025-11-24 08:08:18] 2025-11-24 13:07:40,757 | INFO     | sum of square deviations: 2750799502113.0015
[2025-11-24 08:08:18] 2025-11-24 13:07:40,946 | INFO     | sum of deviations: 9904918921234.719
[2025-11-24 08:08:18] 2025-11-24 13:07:40,946 | INFO     | mean x: 1763926473.2096617
[2025-11-24 08:08:18] 2025-11-24 13:07:40,946 | INFO     | mean y: 2922212.4038647343
[2025-11-24 08:08:18] 2025-11-24 13:07:40,947 | INFO     | intersect: -6348521681.177108
[2025-11-24 08:08:18] 2025-11-24 13:07:40,949 | INFO     | chi2: 10.863193554352701
[2025-11-24 08:08:18] 2025-11-24 13:07:40,956 | INFO     | sum of square deviations: 2730922836670.7573
[2025-11-24 08:08:18] 2025-11-24 13:07:41,125 | INFO     | sum of deviations: 10556000205844.277
[2025-11-24 08:08:18] 2025-11-24 13:07:41,125 | INFO     | mean x: 1763926320.7302663
[2025-11-24 08:08:18] 2025-11-24 13:07:41,125 | INFO     | mean y: 2927207.160290557
[2025-11-24 08:08:18] 2025-11-24 13:07:41,126 | INFO     | intersect: -6815283236.098629
[2025-11-24 08:08:18] 2025-11-24 13:07:41,132 | INFO     | chi2: 8.216628652295174
[2025-11-24 08:08:18] 2025-11-24 13:07:41,132 | INFO     | current chi2=8.216628652295174 (change=24.362678330416863 %)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,132 | INFO     | right removable region: 2064
[2025-11-24 08:08:18] 2025-11-24 13:07:41,135 | INFO     | sum of square deviations: 2730912091032.755
[2025-11-24 08:08:18] 2025-11-24 13:07:41,430 | INFO     | time since job start (126466s) is within the limit (172800.0s)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,436 | INFO     | sum of deviations: 9043505180320.154
[2025-11-24 08:08:18] 2025-11-24 13:07:41,436 | INFO     | mean x: 1763926625.7302663
[2025-11-24 08:08:18] 2025-11-24 13:07:41,436 | INFO     | mean y: 2928818.255205811
[2025-11-24 08:08:18] 2025-11-24 13:07:41,436 | INFO     | intersect: -5838372199.773419
[2025-11-24 08:08:18] 2025-11-24 13:07:41,442 | INFO     | chi2: 6.493853516138064
[2025-11-24 08:08:18] 2025-11-24 13:07:41,442 | INFO     | current chi2=6.493853516138064 (change=40.22150591677449 %)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,444 | INFO     | sum of square deviations: 2711120728751.243
[2025-11-24 08:08:18] 2025-11-24 13:07:41,509 | INFO     | sum of deviations: 8386963127576.412
[2025-11-24 08:08:18] 2025-11-24 13:07:41,510 | INFO     | mean x: 1763926778.2509708
[2025-11-24 08:08:18] 2025-11-24 13:07:41,510 | INFO     | mean y: 2933877.051456311
[2025-11-24 08:08:18] 2025-11-24 13:07:41,510 | INFO     | intersect: -5453845930.666564
[2025-11-24 08:08:18] 2025-11-24 13:07:41,512 | INFO     | chi2: 4.060888793429339
[2025-11-24 08:08:18] 2025-11-24 13:07:41,512 | INFO     | current chi2=4.060888793429339 (change=37.46565450949107 %)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,514 | INFO     | sum of square deviations: 2691425684064.1304
[2025-11-24 08:08:18] 2025-11-24 13:07:41,582 | INFO     | sum of deviations: 8089376563882.751
[2025-11-24 08:08:18] 2025-11-24 13:07:41,582 | INFO     | mean x: 1763926930.7698298
[2025-11-24 08:08:18] 2025-11-24 13:07:41,582 | INFO     | mean y: 2936180.2637469587
[2025-11-24 08:08:18] 2025-11-24 13:07:41,582 | INFO     | intersect: -5298740644.2749815
[2025-11-24 08:08:18] 2025-11-24 13:07:41,584 | INFO     | chi2: 3.568205666168966
[2025-11-24 08:08:18] 2025-11-24 13:07:41,585 | INFO     | current chi2=3.568205666168966 (change=12.13239643640456 %)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,585 | INFO     | left removable region: 30
[2025-11-24 08:08:18] 2025-11-24 13:07:41,587 | INFO     | sum of square deviations: 2609762234054.4653
[2025-11-24 08:08:18] 2025-11-24 13:07:41,668 | INFO     | sum of deviations: 8436120209734.647
[2025-11-24 08:08:18] 2025-11-24 13:07:41,669 | INFO     | mean x: 1763927205.343166
[2025-11-24 08:08:18] 2025-11-24 13:07:41,669 | INFO     | mean y: 2944971.7340216325
[2025-11-24 08:08:18] 2025-11-24 13:07:41,669 | INFO     | intersect: -5698992833.679744
[2025-11-24 08:08:18] 2025-11-24 13:07:41,671 | INFO     | chi2: 0.5360386863692455
[2025-11-24 08:08:18] 2025-11-24 13:07:41,671 | INFO     | current memory leak: 3.23 B/s (using 2034 data points, chi2=0.54)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,672 | INFO     | could have reported an average CPU frequency of 2726 MHz (72 samples)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | ..............................
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . Timing measurements:
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . get job = 0 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . initial setup = 6 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . payload setup = 53 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . stage-in = 0 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . payload execution = 126302 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . stage-out = 5 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | . log creation = 1 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,673 | INFO     | ..............................
[2025-11-24 08:08:18] 2025-11-24 13:07:41,820 | INFO     | 
[2025-11-24 08:08:18] 2025-11-24 13:07:41,820 | INFO     | job summary report
[2025-11-24 08:08:18] 2025-11-24 13:07:41,820 | INFO     | --------------------------------------------------
[2025-11-24 08:08:18] 2025-11-24 13:07:41,820 | INFO     | PanDA job id: 6895326410
[2025-11-24 08:08:18] 2025-11-24 13:07:41,820 | INFO     | task id: 47556137
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | errors: (none)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | pilot state: finished 
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | transexitcode: 0
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | exeerrorcode: 0
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | exeerrordiag: 
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | exitcode: 0
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | exitmsg: OK
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | cpuconsumptiontime: 236730 s
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | nevents: 1000
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | neventsw: 0
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | pid: 1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | pgrp: 1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | corecount: 8
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | event service: False
[2025-11-24 08:08:18] 2025-11-24 13:07:41,821 | INFO     | sizes: {0: 2298632, 1: 2298660, 2: 2298831, 13: 2298859, 24: 2298915, 35: 2298943, 39: 2299361, 47: 2299389, 126359: 2382175, 126360: 2382174, 126366: 2392015, 126
[2025-11-24 08:08:18] 2025-11-24 13:07:41,822 | INFO     | --------------------------------------------------
[2025-11-24 08:08:18] 2025-11-24 13:07:41,822 | INFO     | 
[2025-11-24 08:08:18] 2025-11-24 13:07:41,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 08:08:18] 2025-11-24 13:07:41,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | job 6895326410 has completed (purged errors)
[2025-11-24 08:08:18] 2025-11-24 13:07:41,868 | INFO     | overall cleanup function is called
[2025-11-24 08:08:18] 2025-11-24 13:07:42,895 | INFO     | --- collectZombieJob: --- 10, [1379142]
[2025-11-24 08:08:18] 2025-11-24 13:07:42,946 | INFO     | zombie collector waiting for pid 1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:42,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 08:08:18] 2025-11-24 13:07:42,946 | INFO     | collected zombie processes
[2025-11-24 08:08:18] 2025-11-24 13:07:42,946 | INFO     | will attempt to kill all subprocesses of pid=1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:43,828 | INFO     | PID=1369105 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 08:08:18] 2025-11-24 13:07:43,829 | INFO     | .. there are 10 such processes running
[2025-11-24 08:08:18] 2025-11-24 13:07:44,043 | INFO     | process IDs to be killed: [1379142] (in reverse order)
[2025-11-24 08:08:18] 2025-11-24 13:07:44,158 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 08:08:18] 2025-11-24 13:07:44,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 08:08:18] 2025-11-24 13:07:44,197 | INFO     | did not find any defunct processes belonging to 1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:44,245 | INFO     | did not find any defunct processes belonging to 1379142
[2025-11-24 08:08:18] 2025-11-24 13:07:44,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 08:08:18] 2025-11-24 13:07:44,297 | INFO     | ready for new job
[2025-11-24 08:08:18] 2025-11-24 13:07:44,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 08:08:18] 2025-11-24 13:07:44,409 | INFO     | ***************************************
[2025-11-24 08:08:18] 2025-11-24 13:07:44,409 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 08:08:18] 2025-11-24 13:07:44,410 | INFO     | ***************************************
[2025-11-24 08:08:18] 2025-11-24 13:07:44,410 | INFO     | 
[2025-11-24 08:08:18] 2025-11-24 13:07:44,449 | INFO     | architecture information:
[2025-11-24 08:08:18] 2025-11-24 13:07:44,472 | INFO     | executing command: cat /etc/os-release
[2025-11-24 08:08:18] 2025-11-24 13:07:44,534 | INFO     | cat /etc/os-release:
[2025-11-24 08:08:18] NAME="CentOS Linux"
[2025-11-24 08:08:18] VERSION="7 (Core)"
[2025-11-24 08:08:18] ID="centos"
[2025-11-24 08:08:18] ID_LIKE="rhel fedora"
[2025-11-24 08:08:18] VERSION_ID="7"
[2025-11-24 08:08:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 08:08:18] ANSI_COLOR="0;31"
[2025-11-24 08:08:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 08:08:18] HOME_URL="https://www.centos.org/"
[2025-11-24 08:08:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 08:08:18] 
[2025-11-24 08:08:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 08:08:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 08:08:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 08:08:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 08:08:18] 
[2025-11-24 08:08:18] 2025-11-24 13:07:44,540 | INFO     | ***************************************
[2025-11-24 08:08:18] 2025-11-24 13:07:45,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 08:08:18] 2025-11-24 13:07:45,085 | INFO     | sufficient remaining disk space (70982303744 B)
[2025-11-24 08:08:18] 2025-11-24 13:07:45,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 08:08:18] 2025-11-24 13:07:45,086 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 08:08:18] 2025-11-24 13:07:45,086 | INFO     | update_server=False
[2025-11-24 08:08:18] 2025-11-24 13:07:45,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 08:08:18] 2025-11-24 13:07:45,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 08:08:18] 2025-11-24 13:07:45,449 | INFO     | all data control threads have been joined
[2025-11-24 08:08:18] 2025-11-24 13:07:45,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 08:08:18] 2025-11-24 13:07:45,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:08:18] 2025-11-24 13:07:45,853 | INFO     | aborting loop
[2025-11-24 08:08:18] 2025-11-24 13:07:45,860 | INFO     | all payload control threads have been joined
[2025-11-24 08:08:18] 2025-11-24 13:07:46,092 | INFO     | [job] retrieve thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,432 | INFO     | all job control threads have been joined
[2025-11-24 08:08:18] 2025-11-24 13:07:46,455 | INFO     | [data] control thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,571 | INFO     | [payload] failed_post thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,838 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,859 | INFO     | [job] job monitor thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,866 | INFO     | [payload] control thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:46,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:08:18] 2025-11-24 13:07:47,028 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,042 | INFO     | [job] validate thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,047 | INFO     | [data] copytool_in thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,060 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,094 | INFO     | [data] copytool_out thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,438 | INFO     | [job] control thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,683 | INFO     | [payload] validate_post thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:47,877 | INFO     | [job] queue monitor thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:49,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 08:08:18] 2025-11-24 13:07:50,796 | INFO     | [monitor] cgroup control has ended
[2025-11-24 08:08:18] 2025-11-24 13:07:52,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434446329664)>', '<ExcThread(monitor, started 140433803958016)>']
[2025-11-24 08:08:18] 2025-11-24 13:07:57,331 | INFO     | all workflow threads have been joined
[2025-11-24 08:08:18] 2025-11-24 13:07:57,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 08:08:18] 2025-11-24 13:07:57,331 | INFO     | traces error code: 0
[2025-11-24 08:08:18] 2025-11-24 13:07:57,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 08:08:18] 2025-11-24 13:08:16,453 | INFO     | PID=1369105 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 08:08:18] 2025-11-24 13:08:16,456 | INFO     | .. there are 10 such processes running
[2025-11-24 08:08:18] 2025-11-24 13:08:16,457 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 08:08:18] 2025-11-24 13:08:16,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 08:08:18] 2025-11-24 13:08:16,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 08:08:18] 2025-11-24 13:08:16,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 08:08:18] 2025-11-24 13:08:16,458 | INFO     | [monitor] control thread has ended
[2025-11-24 08:08:18] 2025-11-24 13:08:16,744 [wrapper] ==== pilot stdout END ====
[2025-11-24 08:08:18] 2025-11-24 13:08:16,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 08:08:18] 2025-11-24 13:08:16,807 [wrapper] pilotpid: 1369105
[2025-11-24 08:08:18] 2025-11-24 13:08:16,824 [wrapper] Pilot exit status: 0
[2025-11-24 08:08:18] 2025-11-24 13:08:16,911 [wrapper] pandaids: 6895326410
[2025-11-24 08:08:18] 2025-11-24 13:08:17,168 [wrapper] cleanup supervisor_pilot  236339 1369106
[2025-11-24 08:08:18] 2025-11-24 13:08:17,176 [wrapper] Test setup, not cleaning
[2025-11-24 08:08:18] 2025-11-24 13:08:17,204 [wrapper] apfmon messages muted
[2025-11-24 08:08:18] 2025-11-24 13:08:17,228 [wrapper] ==== wrapper stdout END ====
[2025-11-24 08:08:18] 2025-11-24 13:08:17,252 [wrapper] ==== wrapper stderr END ====
[2025-11-24 08:08:18]  *** Error codes and diagnostics ***
[2025-11-24 08:08:18]     "exeErrorCode": 0,
[2025-11-24 08:08:18]     "exeErrorDiag": "",
[2025-11-24 08:08:18]     "pilotErrorCode": 0,
[2025-11-24 08:08:18]     "pilotErrorDiag": "",
[2025-11-24 08:08:18]  *** Listing of results directory ***
[2025-11-24 08:08:18] total 1332436
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 10:23 pilot3.tar.gz
[2025-11-24 08:08:18] -rwx------. 1 boincer umatlas     36292 Nov 21 10:42 runpilot2-wrapper.sh
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 10:42 queuedata.json
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas       100 Nov 22 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 08:08:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 20:58 run_atlas
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas       105 Nov 22 20:58 job.xml
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas 410465131 Nov 22 20:58 EVNT.47483658._000044.pool.root.1
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 20:58 input.tar.gz
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 20:58 start_atlas.sh
[2025-11-24 08:08:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 20:58 shared
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas         0 Nov 22 20:58 boinc_lockfile
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas      2784 Nov 22 20:58 pandaJob.out
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas        57 Nov 22 20:58 setup.sh.local
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas    989784 Nov 22 20:59 agis_schedconf.cvmfs.json
[2025-11-24 08:08:18] drwx------. 5 boincer umatlas      4096 Nov 22 20:59 pilot3
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas       533 Nov 24 07:54 boinc_task_state.xml
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas      6843 Nov 24 08:04 init_data.xml
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas 913006143 Nov 24 08:06 HITS.47556137._000438.pool.root.1
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas      1059 Nov 24 08:07 memory_monitor_summary.json
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas   1516227 Nov 24 08:07 agis_ddmendpoints.agis.ALL.json
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas   2896458 Nov 24 08:07 log.47556137._000438.job.log.tgz.1
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas      8628 Nov 24 08:07 heartbeat.json
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 08:08 boinc_mmap_file
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas        29 Nov 24 08:08 wrapper_checkpoint.txt
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas        95 Nov 24 08:08 pilot_heartbeat.json
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas       823 Nov 24 08:08 pilotlog.txt
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas  15614179 Nov 24 08:08 log.47556137._000438.job.log.1
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas       353 Nov 24 08:08 output.list
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas       620 Nov 24 08:08 runtime_log
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas  18534400 Nov 24 08:08 result.tar.gz
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas      9354 Nov 24 08:08 runtime_log.err
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas       665 Nov 24 08:08 oGKKDmQSig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYhHKDmHEc5ln.diag
[2025-11-24 08:08:18] -rw-r--r--. 1 boincer umatlas     21448 Nov 24 08:08 stderr.txt
[2025-11-24 08:08:18] HITS file was successfully produced:
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas 913006143 Nov 24 08:06 shared/HITS.pool.root.1
[2025-11-24 08:08:18]  *** Contents of shared directory: ***
[2025-11-24 08:08:18] total 1311160
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas 410465131 Nov 22 20:58 ATLAS.root_0
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 20:58 input.tar.gz
[2025-11-24 08:08:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 20:58 start_atlas.sh
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas 913006143 Nov 24 08:06 HITS.pool.root.1
[2025-11-24 08:08:18] -rw-------. 1 boincer umatlas  18534400 Nov 24 08:08 result.tar.gz
08:08:19 (1364250): run_atlas exited; CPU time 238795.305199
08:08:19 (1364250): called boinc_finish(0)

</stderr_txt>
]]>

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