Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:29 (3449302): wrapper (7.7.26015): starting
17:11:29 (3449302): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 17:11:29] Arguments: --nthreads 8
[2025-11-22 17:11:29] Threads: 8
[2025-11-22 17:11:29] Checking for CVMFS
[2025-11-22 17:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 17:11:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 17:11:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 17:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 17:11:31] 2.11.3.0 137784 23391 188376 153191 3 227 35840118 45568001 15827 130560 0 143918644 99.756 108282526 21961 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-22 17:11:31] CVMFS is ok
[2025-11-22 17:11:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 17:11:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 17:11:31] Further information can be found at the LHC@home message board.
[2025-11-22 17:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 17:11:31] Checking for apptainer binary...
[2025-11-22 17:11:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 17:11:31] Running /usr/bin/apptainer --version
[2025-11-22 17:11:34] apptainer version 1.4.1-1.el9
[2025-11-22 17:11:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 17:11:35] wns0008.triumf.lcg
[2025-11-22 17:11:35] apptainer works
[2025-11-22 17:11:35] Set ATHENA_PROC_NUMBER=8
[2025-11-22 17:11:35] Set ATHENA_CORE_NUMBER=8
[2025-11-22 17:11:35] Starting ATLAS job with PandaID=6895342422
[2025-11-22 17:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 17:19:24]  *** The last 200 lines of the pilot log: ***
[2025-11-22 17:19:24] 2025-11-23 01:18:37,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 17:19:24] 2025-11-23 01:18:37,084 | WARNING  | wrong length of table data, x=[1763860419.0, 1763860480.0, 1763860541.0], y=[1227.0, 582118.0, 386892.0] (must be same and length>=4)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . Timing measurements:
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . get job = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . initial setup = 7 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . payload setup = 20 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . stage-in = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . payload execution = 175 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . stage-out = 1 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . log creation = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895342422/pilotlog.txt
[2025-11-22 17:19:24] 2025-11-23 01:18:37,162 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 17:19:24] - Log from pilotlog.txt -
[2025-11-22 17:19:24] 2025-11-23 01:18:37,073 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895342422/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | INFO     | extracted standard info from prmon json
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 17:19:24] 2025-11-23 01:18:37,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 17:19:24] 2025-11-23 01:18:37,084 | WARNING  | wrong length of table data, x=[1763860419.0, 1763860480.0, 1763860541.0], y=[1227.0, 582118.0, 386892.0] (must be same and length>=4)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . Timing measurements:
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . get job = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . initial setup = 7 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . payload setup = 20 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . stage-in = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . payload execution = 175 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . stage-out = 1 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . log creation = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895342422/pilotlog.txt
[2025-11-22 17:19:24] 2025-11-23 01:18:37,163 | WARNING  | 
[2025-11-22 17:19:24] [begin log extracts]
[2025-11-22 17:19:24] - Log from pilotlog.txt -
[2025-11-22 17:19:24] 2025-11-23 01:18:37,073 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895342422/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | INFO     | extracted standard info from prmon json
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 17:19:24] 2025-11-23 01:18:37,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 17:19:24] 2025-11-23 01:18:37,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 17:19:24] 2025-11-23 01:18:37,084 | WARNING  | wrong length of table data, x=[1763860419.0, 1763860480.0, 1763860541.0], y=[1227.0, 582118.0, 386892.0] (must be same and length>=4)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . Timing measurements:
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . get job = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . initial setup = 7 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . payload setup = 20 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,085 | INFO     | . stage-in = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . payload execution = 175 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . stage-out = 1 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | . log creation = 0 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | ..............................
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 17:19:24] 2025-11-23 01:18:37,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895342422/pilotlog.txt
[2025-11-22 17:19:24] [end log extracts]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,163 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,164 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 17:19:24] 2025-11-23 01:18:37,274 | INFO     | 
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | job summary report
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | --------------------------------------------------
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | PanDA job id: 6895342422
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | task id: 47556137
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 17:16:15,207 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | pilot state: failed 
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | transexitcode: 65
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | exeerrorcode: 65
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | exitcode: 65
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 17:19:24] 2025-11-23 01:18:37,275 | INFO     | cpuconsumptiontime: 51 s
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | nevents: 0
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | neventsw: 0
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | pid: 3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | pgrp: 3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | corecount: 8
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | event service: False
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | sizes: {0: 2297877, 1: 2298475, 2: 2298758, 3: 2298758, 14: 2298786, 20: 2299076, 25: 2299232, 200: 2324716, 202: 2329006, 204: 2329034, 333: 2329200}
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | --------------------------------------------------
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | 
[2025-11-22 17:19:24] 2025-11-23 01:18:37,276 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 17:19:24] 2025-11-23 01:18:37,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | job 6895342422 has completed (purged errors)
[2025-11-22 17:19:24] 2025-11-23 01:18:37,294 | INFO     | overall cleanup function is called
[2025-11-22 17:19:24] 2025-11-23 01:18:38,303 | INFO     | --- collectZombieJob: --- 10, [3459780]
[2025-11-22 17:19:24] 2025-11-23 01:18:38,303 | INFO     | zombie collector waiting for pid 3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:38,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 17:19:24] 2025-11-23 01:18:38,303 | INFO     | collected zombie processes
[2025-11-22 17:19:24] 2025-11-23 01:18:38,303 | INFO     | will attempt to kill all subprocesses of pid=3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:38,707 | INFO     | process IDs to be killed: [3459780] (in reverse order)
[2025-11-22 17:19:24] 2025-11-23 01:18:38,771 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 17:19:24] 2025-11-23 01:18:38,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 17:19:24] 2025-11-23 01:18:38,780 | INFO     | did not find any defunct processes belonging to 3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:38,787 | INFO     | did not find any defunct processes belonging to 3459780
[2025-11-22 17:19:24] 2025-11-23 01:18:38,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 17:19:24] 2025-11-23 01:18:38,789 | INFO     | ready for new job
[2025-11-22 17:19:24] 2025-11-23 01:18:38,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 17:19:24] 2025-11-23 01:18:38,791 | INFO     | ***************************************
[2025-11-22 17:19:24] 2025-11-23 01:18:38,791 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 17:19:24] 2025-11-23 01:18:38,791 | INFO     | ***************************************
[2025-11-22 17:19:24] 2025-11-23 01:18:38,791 | INFO     | 
[2025-11-22 17:19:24] 2025-11-23 01:18:38,793 | INFO     | architecture information:
[2025-11-22 17:19:24] 2025-11-23 01:18:38,793 | INFO     | executing command: cat /etc/os-release
[2025-11-22 17:19:24] 2025-11-23 01:18:38,806 | INFO     | cat /etc/os-release:
[2025-11-22 17:19:24] NAME="CentOS Linux"
[2025-11-22 17:19:24] VERSION="7 (Core)"
[2025-11-22 17:19:24] ID="centos"
[2025-11-22 17:19:24] ID_LIKE="rhel fedora"
[2025-11-22 17:19:24] VERSION_ID="7"
[2025-11-22 17:19:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 17:19:24] ANSI_COLOR="0;31"
[2025-11-22 17:19:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 17:19:24] HOME_URL="https://www.centos.org/"
[2025-11-22 17:19:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 17:19:24] 
[2025-11-22 17:19:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 17:19:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 17:19:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 17:19:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 17:19:24] 
[2025-11-22 17:19:24] 2025-11-23 01:18:38,806 | INFO     | ***************************************
[2025-11-22 17:19:24] 2025-11-23 01:18:39,312 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 17:19:24] 2025-11-23 01:18:39,421 | INFO     | sufficient remaining disk space (686463909888 B)
[2025-11-22 17:19:24] 2025-11-23 01:18:39,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 17:19:24] 2025-11-23 01:18:39,421 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 17:19:24] 2025-11-23 01:18:39,421 | INFO     | update_server=False
[2025-11-22 17:19:24] 2025-11-23 01:18:39,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 17:19:24] 2025-11-23 01:18:39,640 | INFO     | all data control threads have been joined
[2025-11-22 17:19:24] 2025-11-23 01:18:39,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 17:19:24] 2025-11-23 01:18:39,885 | INFO     | all job control threads have been joined
[2025-11-22 17:19:24] 2025-11-23 01:18:40,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:19:24] 2025-11-23 01:18:40,378 | INFO     | aborting loop
[2025-11-22 17:19:24] 2025-11-23 01:18:40,427 | INFO     | [job] retrieve thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,645 | INFO     | [data] control thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,651 | INFO     | [data] copytool_in thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,719 | INFO     | all payload control threads have been joined
[2025-11-22 17:19:24] 2025-11-23 01:18:40,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 17:19:24] 2025-11-23 01:18:40,808 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,891 | INFO     | [job] control thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:40,901 | INFO     | [job] validate thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,010 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,122 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,384 | INFO     | [job] job monitor thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,739 | INFO     | [payload] control thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,743 | INFO     | [data] copytool_out thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,870 | INFO     | [payload] validate_post thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:41,948 | INFO     | [payload] failed_post thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:42,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:19:24] 2025-11-23 01:18:43,295 | INFO     | [job] queue monitor thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:18:44,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 17:19:24] 2025-11-23 01:19:09,846 | INFO     | PID=3453043 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 17:19:24] 2025-11-23 01:19:09,846 | INFO     | .. there are 26 such processes running
[2025-11-22 17:19:24] 2025-11-23 01:19:09,846 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 17:19:24] 2025-11-23 01:19:09,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 17:19:24] 2025-11-23 01:19:09,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 17:19:24] 2025-11-23 01:19:17,720 | INFO     | [monitor] cgroup control has ended
[2025-11-22 17:19:24] 2025-11-23 01:19:18,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464234678080)>', '<ExcThread(monitor, started 140463466075904)>']
[2025-11-22 17:19:24] 2025-11-23 01:19:18,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 17:19:24] 2025-11-23 01:19:18,900 | INFO     | [monitor] control thread has ended
[2025-11-22 17:19:24] 2025-11-23 01:19:23,502 | INFO     | all workflow threads have been joined
[2025-11-22 17:19:24] 2025-11-23 01:19:23,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 17:19:24] 2025-11-23 01:19:23,502 | INFO     | traces error code: 0
[2025-11-22 17:19:24] 2025-11-23 01:19:23,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 17:19:24] 2025-11-23 01:19:23,639 [wrapper] ==== pilot stdout END ====
[2025-11-22 17:19:24] 2025-11-23 01:19:23,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 17:19:24] 2025-11-23 01:19:23,643 [wrapper] pilotpid: 3453043
[2025-11-22 17:19:24] 2025-11-23 01:19:23,645 [wrapper] Pilot exit status: 0
[2025-11-22 17:19:24] 2025-11-23 01:19:23,740 [wrapper] pandaids: 6895342422
[2025-11-22 17:19:24] 2025-11-23 01:19:23,825 [wrapper] cleanup supervisor_pilot 3453049 3453044
[2025-11-22 17:19:24] 2025-11-23 01:19:23,871 [wrapper] Test setup, not cleaning
[2025-11-22 17:19:24] 2025-11-23 01:19:23,905 [wrapper] apfmon messages muted
[2025-11-22 17:19:24] 2025-11-23 01:19:23,910 [wrapper] ==== wrapper stdout END ====
[2025-11-22 17:19:24] 2025-11-23 01:19:23,912 [wrapper] ==== wrapper stderr END ====
[2025-11-22 17:19:24]  *** Error codes and diagnostics ***
[2025-11-22 17:19:24]     "exeErrorCode": 65,
[2025-11-22 17:19:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 17:19:24]     "pilotErrorCode": 1305,
[2025-11-22 17:19:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 17:19:24]  *** Listing of results directory ***
[2025-11-22 17:19:24] total 406756
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc    576529 Nov 22 07:04 pilot3.tar.gz
[2025-11-22 17:19:24] -rwx------. 1 boinc boinc     36292 Nov 22 07:17 runpilot2-wrapper.sh
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc      5112 Nov 22 07:17 queuedata.json
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc       100 Nov 22 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 17:19:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 17:11 run_atlas
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc       105 Nov 22 17:11 job.xml
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc      6443 Nov 22 17:11 init_data.xml
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc 412271008 Nov 22 17:11 EVNT.47483658._000407.pool.root.1
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc     15847 Nov 22 17:11 start_atlas.sh
[2025-11-22 17:19:24] drwxrwx--x. 2 boinc boinc      4096 Nov 22 17:11 shared
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc    590095 Nov 22 17:11 input.tar.gz
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc         0 Nov 22 17:11 boinc_lockfile
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc      2784 Nov 22 17:11 pandaJob.out
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc    989784 Nov 22 17:12 agis_schedconf.cvmfs.json
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc   1526164 Nov 22 17:12 agis_ddmendpoints.agis.ALL.json
[2025-11-22 17:19:24] drwx------. 5 boinc boinc      4096 Nov 22 17:12 pilot3
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc       525 Nov 22 17:16 boinc_task_state.xml
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc       991 Nov 22 17:16 memory_monitor_summary.json
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc     50606 Nov 22 17:16 log.47556137._004029.job.log.tgz.1
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc        95 Nov 22 17:18 pilot_heartbeat.json
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc     10334 Nov 22 17:18 heartbeat.json
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc        23 Nov 22 17:19 wrapper_checkpoint.txt
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc      8192 Nov 22 17:19 boinc_mmap_file
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc      4822 Nov 22 17:19 pilotlog.txt
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc    114143 Nov 22 17:19 log.47556137._004029.job.log.1
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc       186 Nov 22 17:19 output.list
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc       620 Nov 22 17:19 runtime_log
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc    184320 Nov 22 17:19 result.tar.gz
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc      8634 Nov 22 17:19 runtime_log.err
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc       647 Nov 22 17:19 lT8KDm0X4g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml9HKDm9UUPTo.diag
[2025-11-22 17:19:24] -rw-r--r--. 1 boinc boinc     22589 Nov 22 17:19 stderr.txt
[2025-11-22 17:19:24] No HITS result produced
[2025-11-22 17:19:24]  *** Contents of shared directory: ***
[2025-11-22 17:19:24] total 403392
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc 412271008 Nov 22 17:11 ATLAS.root_0
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc     15847 Nov 22 17:11 start_atlas.sh
[2025-11-22 17:19:24] -rw-r--r--. 2 boinc boinc    590095 Nov 22 17:11 input.tar.gz
[2025-11-22 17:19:24] -rw-------. 1 boinc boinc    184320 Nov 22 17:19 result.tar.gz
17:19:25 (3449302): run_atlas exited; CPU time 56.474620
17:19:25 (3449302): called boinc_finish(0)

</stderr_txt>
]]>

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