Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:31:19 (1238000): wrapper (7.7.26015): starting
20:31:19 (1238000): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 20:31:19] Arguments: --nthreads 8
[2025-11-22 20:31:19] Threads: 8
[2025-11-22 20:31:19] Checking for CVMFS
[2025-11-22 20:31:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:31:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:31:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:31:19] 2.13.2.0 6639 28863 311096 153192 3 410 21850937 40960001 15675 16776704 0 43322818 99.691 32423191 39839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:31:19] CVMFS is ok
[2025-11-22 20:31:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:31:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:31:19] Further information can be found at the LHC@home message board.
[2025-11-22 20:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:31:19] Checking for apptainer binary...
[2025-11-22 20:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:31:19] Running /usr/bin/apptainer --version
[2025-11-22 20:31:19] apptainer version 1.4.4-1.el9
[2025-11-22 20:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:31:19] c-206-37.aglt2.org
[2025-11-22 20:31:19] apptainer works
[2025-11-22 20:31:19] Set ATHENA_PROC_NUMBER=8
[2025-11-22 20:31:19] Set ATHENA_CORE_NUMBER=8
[2025-11-22 20:31:20] Starting ATLAS job with PandaID=6895328312
[2025-11-22 20:31:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 18:44:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 18:44:06] 2025-11-23 23:43:08,802 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3274.3004375
[2025-11-23 18:44:06] 2025-11-23 23:43:08,811 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895328312/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:44:06] 2025-11-23 23:43:08,812 | INFO     | extracted standard info from prmon json
[2025-11-23 18:44:06] 2025-11-23 23:43:08,812 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 18:44:06] 2025-11-23 23:43:08,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 18:44:06] 2025-11-23 23:43:08,829 | INFO     | fitting pss+swap vs Time
[2025-11-23 18:44:06] 2025-11-23 23:43:08,831 | INFO     | sum of square deviations: 695614621898.5958
[2025-11-23 18:44:06] 2025-11-23 23:43:08,866 | INFO     | sum of deviations: 3658945293312.221
[2025-11-23 18:44:06] 2025-11-23 23:43:08,866 | INFO     | mean x: 1763901429.0175707
[2025-11-23 18:44:06] 2025-11-23 23:43:08,866 | INFO     | mean y: 2915520.425515661
[2025-11-23 18:44:06] 2025-11-23 23:43:08,866 | INFO     | intersect: -9275237394.12231
[2025-11-23 18:44:06] 2025-11-23 23:43:08,868 | INFO     | chi2: 4.641753280125735
[2025-11-23 18:44:06] 2025-11-23 23:43:08,869 | INFO     | sum of square deviations: 687676403322.8931
[2025-11-23 18:44:06] 2025-11-23 23:43:08,918 | INFO     | sum of deviations: 4015642517835.656
[2025-11-23 18:44:06] 2025-11-23 23:43:08,918 | INFO     | mean x: 1763901276.5291412
[2025-11-23 18:44:06] 2025-11-23 23:43:08,918 | INFO     | mean y: 2922369.351226994
[2025-11-23 18:44:06] 2025-11-23 23:43:08,918 | INFO     | intersect: -10297266686.2403
[2025-11-23 18:44:06] 2025-11-23 23:43:08,924 | INFO     | chi2: 2.406730057001698
[2025-11-23 18:44:06] 2025-11-23 23:43:08,924 | INFO     | current chi2=2.406730057001698 (change=48.15040973189111 %)
[2025-11-23 18:44:06] 2025-11-23 23:43:08,925 | INFO     | sum of square deviations: 679798678334.999
[2025-11-23 18:44:06] 2025-11-23 23:43:08,963 | INFO     | monitor loop #5167: job 0:6895328312 is in state 'finished'
[2025-11-23 18:44:06] 2025-11-23 23:43:08,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 18:44:06] 2025-11-23 23:43:08,969 | INFO     | sum of deviations: 4153994293794.768
[2025-11-23 18:44:06] 2025-11-23 23:43:08,970 | INFO     | mean x: 1763901124.0392609
[2025-11-23 18:44:06] 2025-11-23 23:43:08,970 | INFO     | mean y: 2925044.259430331
[2025-11-23 18:44:06] 2025-11-23 23:43:08,970 | INFO     | intersect: -10775611951.463394
[2025-11-23 18:44:06] 2025-11-23 23:43:08,971 | INFO     | chi2: 1.8908787449516462
[2025-11-23 18:44:06] 2025-11-23 23:43:08,971 | INFO     | current chi2=1.8908787449516462 (change=21.433700491225796 %)
[2025-11-23 18:44:06] 2025-11-23 23:43:08,971 | INFO     | right removable region: 1298
[2025-11-23 18:44:06] 2025-11-23 23:43:08,972 | INFO     | sum of square deviations: 687674073554.9493
[2025-11-23 18:44:06] 2025-11-23 23:43:09,002 | INFO     | sum of deviations: 3373468044907.1035
[2025-11-23 18:44:06] 2025-11-23 23:43:09,002 | INFO     | mean x: 1763901581.5283742
[2025-11-23 18:44:06] 2025-11-23 23:43:09,002 | INFO     | mean y: 2920995.86196319
[2025-11-23 18:44:06] 2025-11-23 23:43:09,002 | INFO     | intersect: -8650110794.163189
[2025-11-23 18:44:06] 2025-11-23 23:43:09,003 | INFO     | chi2: 3.028057416899742
[2025-11-23 18:44:06] 2025-11-23 23:43:09,003 | INFO     | current chi2=3.028057416899742 (change=34.76479178967223 %)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,004 | INFO     | sum of square deviations: 679794256938.0743
[2025-11-23 18:44:06] 2025-11-23 23:43:09,038 | INFO     | sum of deviations: 3328081645509.392
[2025-11-23 18:44:06] 2025-11-23 23:43:09,038 | INFO     | mean x: 1763901734.0384912
[2025-11-23 18:44:06] 2025-11-23 23:43:09,038 | INFO     | mean y: 2921873.8321785987
[2025-11-23 18:44:06] 2025-11-23 23:43:09,038 | INFO     | intersect: -8632645322.597454
[2025-11-23 18:44:06] 2025-11-23 23:43:09,039 | INFO     | chi2: 3.0254763192978418
[2025-11-23 18:44:06] 2025-11-23 23:43:09,039 | INFO     | current chi2=3.0254763192978418 (change=0.08523938771751241 %)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,039 | INFO     | left removable region: 20
[2025-11-23 18:44:06] 2025-11-23 23:43:09,040 | INFO     | sum of square deviations: 647359486917.0204
[2025-11-23 18:44:06] 2025-11-23 23:43:09,072 | INFO     | sum of deviations: 3758671009686.7183
[2025-11-23 18:44:06] 2025-11-23 23:43:09,072 | INFO     | mean x: 1763901703.571205
[2025-11-23 18:44:06] 2025-11-23 23:43:09,072 | INFO     | mean y: 2932500.0031298907
[2025-11-23 18:44:06] 2025-11-23 23:43:09,072 | INFO     | intersect: -10238558249.94233
[2025-11-23 18:44:06] 2025-11-23 23:43:09,073 | INFO     | chi2: 0.25547909210677955
[2025-11-23 18:44:06] 2025-11-23 23:43:09,074 | INFO     | current memory leak: 5.81 B/s (using 1278 data points, chi2=0.26)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,074 | INFO     | could have reported an average CPU frequency of 3278 MHz (47 samples)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | ..............................
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . Timing measurements:
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . get job = 0 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . initial setup = 3 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . payload setup = 7 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . stage-in = 0 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . payload execution = 79844 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . stage-out = 3 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | . log creation = 0 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,075 | INFO     | ..............................
[2025-11-23 18:44:06] 2025-11-23 23:43:09,148 | INFO     | 
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | job summary report
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | --------------------------------------------------
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | PanDA job id: 6895328312
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | task id: 47556137
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | errors: (none)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | pilot state: finished 
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | transexitcode: 0
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | exeerrorcode: 0
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | exeerrordiag: 
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | exitcode: 0
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | exitmsg: OK
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | cpuconsumptiontime: 201256 s
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | nevents: 1000
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | neventsw: 0
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | pid: 1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | pgrp: 1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | corecount: 8
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | event service: False
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | sizes: {0: 2298632, 1: 2298831, 9: 2299093, 11: 2299121, 79855: 2361910, 79859: 2370904, 79860: 2371088, 79869: 2371334}
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | --------------------------------------------------
[2025-11-23 18:44:06] 2025-11-23 23:43:09,149 | INFO     | 
[2025-11-23 18:44:06] 2025-11-23 23:43:09,150 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-23 18:44:06] 2025-11-23 23:43:09,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | job 6895328312 has completed (purged errors)
[2025-11-23 18:44:06] 2025-11-23 23:43:09,172 | INFO     | overall cleanup function is called
[2025-11-23 18:44:06] 2025-11-23 23:43:10,190 | INFO     | --- collectZombieJob: --- 10, [1248325]
[2025-11-23 18:44:06] 2025-11-23 23:43:10,190 | INFO     | zombie collector waiting for pid 1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:10,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 18:44:06] 2025-11-23 23:43:10,190 | INFO     | collected zombie processes
[2025-11-23 18:44:06] 2025-11-23 23:43:10,190 | INFO     | will attempt to kill all subprocesses of pid=1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:10,482 | INFO     | process IDs to be killed: [1248325] (in reverse order)
[2025-11-23 18:44:06] 2025-11-23 23:43:10,602 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 18:44:06] 2025-11-23 23:43:10,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 18:44:06] 2025-11-23 23:43:10,639 | INFO     | did not find any defunct processes belonging to 1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:10,665 | INFO     | did not find any defunct processes belonging to 1248325
[2025-11-23 18:44:06] 2025-11-23 23:43:10,677 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 18:44:06] 2025-11-23 23:43:10,677 | INFO     | ready for new job
[2025-11-23 18:44:06] 2025-11-23 23:43:10,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 18:44:06] 2025-11-23 23:43:10,688 | INFO     | ***************************************
[2025-11-23 18:44:06] 2025-11-23 23:43:10,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 18:44:06] 2025-11-23 23:43:10,688 | INFO     | ***************************************
[2025-11-23 18:44:06] 2025-11-23 23:43:10,688 | INFO     | 
[2025-11-23 18:44:06] 2025-11-23 23:43:10,696 | INFO     | architecture information:
[2025-11-23 18:44:06] 2025-11-23 23:43:10,708 | INFO     | executing command: cat /etc/os-release
[2025-11-23 18:44:06] 2025-11-23 23:43:10,726 | INFO     | cat /etc/os-release:
[2025-11-23 18:44:06] NAME="CentOS Linux"
[2025-11-23 18:44:06] VERSION="7 (Core)"
[2025-11-23 18:44:06] ID="centos"
[2025-11-23 18:44:06] ID_LIKE="rhel fedora"
[2025-11-23 18:44:06] VERSION_ID="7"
[2025-11-23 18:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 18:44:06] ANSI_COLOR="0;31"
[2025-11-23 18:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 18:44:06] HOME_URL="https://www.centos.org/"
[2025-11-23 18:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 18:44:06] 
[2025-11-23 18:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 18:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 18:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 18:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 18:44:06] 
[2025-11-23 18:44:06] 2025-11-23 23:43:10,726 | INFO     | ***************************************
[2025-11-23 18:44:06] 2025-11-23 23:43:11,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-23 18:44:06] 2025-11-23 23:43:11,300 | INFO     | sufficient remaining disk space (80856743936 B)
[2025-11-23 18:44:06] 2025-11-23 23:43:11,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 18:44:06] 2025-11-23 23:43:11,301 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 18:44:06] 2025-11-23 23:43:11,301 | INFO     | update_server=False
[2025-11-23 18:44:06] 2025-11-23 23:43:11,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 18:44:06] 2025-11-23 23:43:11,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 18:44:06] 2025-11-23 23:43:11,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 18:44:06] 2025-11-23 23:43:11,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 18:44:06] 2025-11-23 23:43:11,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:44:06] 2025-11-23 23:43:11,475 | INFO     | will abort loop
[2025-11-23 18:44:06] 2025-11-23 23:43:11,518 | INFO     | all data control threads have been joined
[2025-11-23 18:44:06] 2025-11-23 23:43:11,543 | INFO     | all payload control threads have been joined
[2025-11-23 18:44:06] 2025-11-23 23:43:12,196 | INFO     | all job control threads have been joined
[2025-11-23 18:44:06] 2025-11-23 23:43:12,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 18:44:06] 2025-11-23 23:43:12,307 | INFO     | [job] retrieve thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,409 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,480 | INFO     | [job] job monitor thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,524 | INFO     | [data] control thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,549 | INFO     | [payload] control thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,555 | INFO     | [payload] failed_post thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:12,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,174 | INFO     | [data] copytool_in thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,202 | INFO     | [job] control thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,251 | INFO     | [job] validate thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,371 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,655 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:13,664 | INFO     | [payload] validate_post thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:14,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:44:06] 2025-11-23 23:43:14,297 | INFO     | [data] copytool_out thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:15,169 | INFO     | [job] queue monitor thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:15,312 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 18:44:06] 2025-11-23 23:43:41,885 | INFO     | PID=1241676 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 18:44:06] 2025-11-23 23:43:41,885 | INFO     | .. there are 18 such processes running
[2025-11-23 18:44:06] 2025-11-23 23:43:41,885 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 18:44:06] 2025-11-23 23:43:41,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 18:44:06] 2025-11-23 23:43:41,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 18:44:06] 2025-11-23 23:44:00,299 | INFO     | [monitor] cgroup control has ended
[2025-11-23 18:44:06] 2025-11-23 23:44:01,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426278074176)>', '<ExcThread(monitor, started 140425935435520)>']
[2025-11-23 18:44:06] 2025-11-23 23:44:02,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 18:44:06] 2025-11-23 23:44:02,024 | INFO     | [monitor] control thread has ended
[2025-11-23 18:44:06] 2025-11-23 23:44:06,257 | INFO     | all workflow threads have been joined
[2025-11-23 18:44:06] 2025-11-23 23:44:06,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 18:44:06] 2025-11-23 23:44:06,257 | INFO     | traces error code: 0
[2025-11-23 18:44:06] 2025-11-23 23:44:06,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 18:44:06] 2025-11-23 23:44:06,529 [wrapper] ==== pilot stdout END ====
[2025-11-23 18:44:06] 2025-11-23 23:44:06,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 18:44:06] 2025-11-23 23:44:06,544 [wrapper] pilotpid: 1241676
[2025-11-23 18:44:06] 2025-11-23 23:44:06,547 [wrapper] Pilot exit status: 0
[2025-11-23 18:44:06] 2025-11-23 23:44:06,582 [wrapper] pandaids: 6895328312
[2025-11-23 18:44:06] 2025-11-23 23:44:06,673 [wrapper] cleanup supervisor_pilot   80149 1241677
[2025-11-23 18:44:06] 2025-11-23 23:44:06,676 [wrapper] Test setup, not cleaning
[2025-11-23 18:44:06] 2025-11-23 23:44:06,678 [wrapper] apfmon messages muted
[2025-11-23 18:44:06] 2025-11-23 23:44:06,681 [wrapper] ==== wrapper stdout END ====
[2025-11-23 18:44:06] 2025-11-23 23:44:06,686 [wrapper] ==== wrapper stderr END ====
[2025-11-23 18:44:06]  *** Error codes and diagnostics ***
[2025-11-23 18:44:06]     "exeErrorCode": 0,
[2025-11-23 18:44:06]     "exeErrorDiag": "",
[2025-11-23 18:44:06]     "pilotErrorCode": 0,
[2025-11-23 18:44:06]     "pilotErrorDiag": "",
[2025-11-23 18:44:06]  *** Listing of results directory ***
[2025-11-23 18:44:06] total 1340724
[2025-11-23 18:44:06] -rwx------. 1 boincer umatlas     36292 Nov 21 11:49 runpilot2-wrapper.sh
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 11:49 queuedata.json
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 11:49 pilot3.tar.gz
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas       100 Nov 22 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 18:44:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 20:31 run_atlas
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas       105 Nov 22 20:31 job.xml
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas 409766489 Nov 22 20:31 EVNT.47483658._000070.pool.root.1
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 20:31 start_atlas.sh
[2025-11-23 18:44:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 20:31 shared
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas    590088 Nov 22 20:31 input.tar.gz
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas         0 Nov 22 20:31 boinc_lockfile
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas      2784 Nov 22 20:31 pandaJob.out
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas        57 Nov 22 20:31 setup.sh.local
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas    989784 Nov 22 20:31 agis_schedconf.cvmfs.json
[2025-11-23 18:44:06] drwx------. 5 boincer umatlas      4096 Nov 22 20:31 pilot3
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas       532 Nov 23 18:32 boinc_task_state.xml
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas      6901 Nov 23 18:38 init_data.xml
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas 933450780 Nov 23 18:42 HITS.47556137._000694.pool.root.1
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas      1050 Nov 23 18:42 memory_monitor_summary.json
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas        95 Nov 23 18:42 pilot_heartbeat.json
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas   1526164 Nov 23 18:42 agis_ddmendpoints.agis.ALL.json
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas   2370189 Nov 23 18:42 log.47556137._000694.job.log.tgz.1
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas      8588 Nov 23 18:43 heartbeat.json
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 18:44 boinc_mmap_file
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas      5010 Nov 23 18:44 pilotlog.txt
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas        29 Nov 23 18:44 wrapper_checkpoint.txt
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas  10507652 Nov 23 18:44 log.47556137._000694.job.log.1
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas       353 Nov 23 18:44 output.list
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas       620 Nov 23 18:44 runtime_log
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas  12902400 Nov 23 18:44 result.tar.gz
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas      9343 Nov 23 18:44 runtime_log.err
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas       661 Nov 23 18:44 kO6NDmLVjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJZJKDm4zX6Qo.diag
[2025-11-23 18:44:06] -rw-r--r--. 1 boincer umatlas     21343 Nov 23 18:44 stderr.txt
[2025-11-23 18:44:06] HITS file was successfully produced:
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas 933450780 Nov 23 18:42 shared/HITS.pool.root.1
[2025-11-23 18:44:06]  *** Contents of shared directory: ***
[2025-11-23 18:44:06] total 1324940
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas 409766489 Nov 22 20:31 ATLAS.root_0
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 20:31 start_atlas.sh
[2025-11-23 18:44:06] -rw-r--r--. 2 boincer umatlas    590088 Nov 22 20:31 input.tar.gz
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas 933450780 Nov 23 18:42 HITS.pool.root.1
[2025-11-23 18:44:06] -rw-------. 1 boincer umatlas  12902400 Nov 23 18:44 result.tar.gz
18:44:08 (1238000): run_atlas exited; CPU time 201551.521446
18:44:08 (1238000): called boinc_finish(0)

</stderr_txt>
]]>

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