Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:02 (3075196): wrapper (7.7.26015): starting
18:07:02 (3075196): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 18:07:02] Arguments: --nthreads 12
[2025-11-24 18:07:02] Threads: 12
[2025-11-24 18:07:02] Checking for CVMFS
[2025-11-24 18:07:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:07:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:07:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:07:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:07:02] 2.13.3.0 10248 24606 90592 153252 0 90 37432325 46080000 1043 130560 1 9782452 99.910 1317432 3025 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-24 18:07:02] CVMFS is ok
[2025-11-24 18:07:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:07:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:07:02] Further information can be found at the LHC@home message board.
[2025-11-24 18:07:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:07:02] Checking for apptainer binary...
[2025-11-24 18:07:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:07:02] Running /usr/bin/apptainer --version
[2025-11-24 18:07:02] apptainer version 1.4.3-1.el9
[2025-11-24 18:07:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:07:02] gpu01.farm.particle.cz
[2025-11-24 18:07:02] apptainer works
[2025-11-24 18:07:03] Set ATHENA_PROC_NUMBER=12
[2025-11-24 18:07:03] Set ATHENA_CORE_NUMBER=12
[2025-11-24 18:07:03] Starting ATLAS job with PandaID=6894254342
[2025-11-24 18:07:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:03:38]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:03:38] 2025-11-24 21:02:56,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:03:38] 2025-11-24 21:02:57,236 | INFO     | time since job start (14147s) is within the limit (172800.0s)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,021 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:03:38] 2025-11-24 21:02:58,024 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3214.23878125
[2025-11-24 22:03:38] 2025-11-24 21:02:58,028 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6894254342/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,028 | INFO     | extracted standard info from prmon json
[2025-11-24 22:03:38] 2025-11-24 21:02:58,028 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:03:38] 2025-11-24 21:02:58,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:03:38] 2025-11-24 21:02:58,030 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:03:38] 2025-11-24 21:02:58,031 | INFO     | sum of square deviations: 3871893213.0301557
[2025-11-24 22:03:38] 2025-11-24 21:02:58,031 | INFO     | sum of deviations: 112703641251.89655
[2025-11-24 22:03:38] 2025-11-24 21:02:58,031 | INFO     | mean x: 1764011100.435345
[2025-11-24 22:03:38] 2025-11-24 21:02:58,031 | INFO     | mean y: 3484968.793103448
[2025-11-24 22:03:38] 2025-11-24 21:02:58,031 | INFO     | intersect: -51343611474.561195
[2025-11-24 22:03:38] 2025-11-24 21:02:58,032 | INFO     | chi2: 3.281875604385639
[2025-11-24 22:03:38] 2025-11-24 21:02:58,032 | INFO     | sum of square deviations: 3626968753.5594854
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | sum of deviations: 172921349913.01324
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | mean x: 1764010947.9559472
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | mean y: 3522224.101321586
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | intersect: -84098430427.82513
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | chi2: 1.5800620766246314
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | current chi2=1.5800620766246314 (change=51.85490655059682 %)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,033 | INFO     | sum of square deviations: 3392533401.0495715
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | sum of deviations: 165782515992.33347
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | mean x: 1764010795.4549549
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | mean y: 3517580.3333333335
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | intersect: -86198182841.44737
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | chi2: 1.578129590980487
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | current chi2=1.578129590980487 (change=0.12230441276538337 %)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,034 | INFO     | right removable region: 221
[2025-11-24 22:03:38] 2025-11-24 21:02:58,035 | INFO     | sum of square deviations: 3626878476.255505
[2025-11-24 22:03:38] 2025-11-24 21:02:58,035 | INFO     | sum of deviations: 57668453414.05719
[2025-11-24 22:03:38] 2025-11-24 21:02:58,035 | INFO     | mean x: 1764011252.9427314
[2025-11-24 22:03:38] 2025-11-24 21:02:58,035 | INFO     | mean y: 3518930.004405286
[2025-11-24 22:03:38] 2025-11-24 21:02:58,036 | INFO     | intersect: -28044788017.1937
[2025-11-24 22:03:38] 2025-11-24 21:02:58,036 | INFO     | chi2: 1.7725299688538718
[2025-11-24 22:03:38] 2025-11-24 21:02:58,036 | INFO     | current chi2=1.7725299688538718 (change=45.99033654763749 %)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,036 | INFO     | sum of square deviations: 3392450138.7387443
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | sum of deviations: 45526650694.64859
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | mean x: 1764011405.4414415
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | mean y: 3526828.472972973
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | intersect: -23669490546.151245
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | chi2: 1.7543379752924286
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | current chi2=1.7543379752924286 (change=1.0263292514713438 %)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | left removable region: 20
[2025-11-24 22:03:38] 2025-11-24 21:02:58,037 | INFO     | sum of square deviations: 2517948735.6815815
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | sum of deviations: 76424947236.60693
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | mean x: 1764011374.960199
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | mean y: 3578912.8258706466
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | intersect: -53537811483.915
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | chi2: 0.012772478354740845
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | current memory leak: 30.35 B/s (using 201 data points, chi2=0.01)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,038 | INFO     | could have reported an average CPU frequency of 3205 MHz (11 samples)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | ..............................
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . Timing measurements:
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . get job = 0 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . initial setup = 2 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . payload setup = 5 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . stage-in = 0 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . payload execution = 14116 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . stage-out = 2 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | . log creation = 0 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,039 | INFO     | ..............................
[2025-11-24 22:03:38] 2025-11-24 21:02:58,104 | INFO     | 
[2025-11-24 22:03:38] 2025-11-24 21:02:58,104 | INFO     | job summary report
[2025-11-24 22:03:38] 2025-11-24 21:02:58,104 | INFO     | --------------------------------------------------
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | PanDA job id: 6894254342
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | task id: 47533967
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | errors: (none)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | pilot state: finished 
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | transexitcode: 0
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | exeerrorcode: 0
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | exeerrordiag: 
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | exitcode: 0
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | exitmsg: OK
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | cpuconsumptiontime: 164961 s
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | nevents: 1000
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | neventsw: 0
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | pid: 3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:58,105 | INFO     | pgrp: 3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | corecount: 12
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | event service: False
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | sizes: {0: 2284310, 3: 2284572, 10: 2284600, 14125: 2316334, 14128: 2325328, 14131: 2325384, 14134: 2325758}
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | --------------------------------------------------
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | 
[2025-11-24 22:03:38] 2025-11-24 21:02:58,106 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | job 6894254342 has completed (purged errors)
[2025-11-24 22:03:38] 2025-11-24 21:02:58,124 | INFO     | overall cleanup function is called
[2025-11-24 22:03:38] 2025-11-24 21:02:59,139 | INFO     | --- collectZombieJob: --- 10, [3085743]
[2025-11-24 22:03:38] 2025-11-24 21:02:59,139 | INFO     | zombie collector waiting for pid 3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:59,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:03:38] 2025-11-24 21:02:59,139 | INFO     | collected zombie processes
[2025-11-24 22:03:38] 2025-11-24 21:02:59,139 | INFO     | will attempt to kill all subprocesses of pid=3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:59,255 | INFO     | process IDs to be killed: [3085743] (in reverse order)
[2025-11-24 22:03:38] 2025-11-24 21:02:59,293 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:03:38] 2025-11-24 21:02:59,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:03:38] 2025-11-24 21:02:59,297 | INFO     | did not find any defunct processes belonging to 3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:59,300 | INFO     | did not find any defunct processes belonging to 3085743
[2025-11-24 22:03:38] 2025-11-24 21:02:59,300 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:03:38] 2025-11-24 21:02:59,300 | INFO     | ready for new job
[2025-11-24 22:03:38] 2025-11-24 21:02:59,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:03:38] 2025-11-24 21:02:59,302 | INFO     | ***************************************
[2025-11-24 22:03:38] 2025-11-24 21:02:59,302 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:03:38] 2025-11-24 21:02:59,302 | INFO     | ***************************************
[2025-11-24 22:03:38] 2025-11-24 21:02:59,302 | INFO     | 
[2025-11-24 22:03:38] 2025-11-24 21:02:59,303 | INFO     | architecture information:
[2025-11-24 22:03:38] 2025-11-24 21:02:59,304 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:03:38] 2025-11-24 21:02:59,315 | INFO     | cat /etc/os-release:
[2025-11-24 22:03:38] NAME="CentOS Linux"
[2025-11-24 22:03:38] VERSION="7 (Core)"
[2025-11-24 22:03:38] ID="centos"
[2025-11-24 22:03:38] ID_LIKE="rhel fedora"
[2025-11-24 22:03:38] VERSION_ID="7"
[2025-11-24 22:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:03:38] ANSI_COLOR="0;31"
[2025-11-24 22:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:03:38] HOME_URL="https://www.centos.org/"
[2025-11-24 22:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:03:38] 
[2025-11-24 22:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:03:38] 
[2025-11-24 22:03:38] 2025-11-24 21:02:59,316 | INFO     | ***************************************
[2025-11-24 22:03:38] 2025-11-24 21:02:59,818 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | INFO     | sufficient remaining disk space (50831818752 B)
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | INFO     | update_server=False
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:03:38] 2025-11-24 21:02:59,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:03:38] 2025-11-24 21:03:00,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:03:38] 2025-11-24 21:03:00,013 | INFO     | aborting loop
[2025-11-24 22:03:38] 2025-11-24 21:03:00,061 | INFO     | all payload control threads have been joined
[2025-11-24 22:03:38] 2025-11-24 21:03:00,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:03:38] 2025-11-24 21:03:00,838 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:00,839 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:00,873 | INFO     | all data control threads have been joined
[2025-11-24 22:03:38] 2025-11-24 21:03:01,018 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,066 | INFO     | [payload] control thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,086 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,102 | INFO     | all job control threads have been joined
[2025-11-24 22:03:38] 2025-11-24 21:03:01,198 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:03:38] 2025-11-24 21:03:01,879 | INFO     | [data] control thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,954 | INFO     | [job] validate thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:01,982 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:02,107 | INFO     | [job] control thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:02,147 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:02,210 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:02,415 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:02,604 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:05,352 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:10,392 | INFO     | job.realtimelogging is not enabled
[2025-11-24 22:03:38] 2025-11-24 21:03:11,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:03:38] 2025-11-24 21:03:30,407 | INFO     | PID=3079057 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 22:03:38] 2025-11-24 21:03:30,407 | INFO     | .. there are 2 such processes running
[2025-11-24 22:03:38] 2025-11-24 21:03:30,407 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:03:38] 2025-11-24 21:03:30,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:03:38] 2025-11-24 21:03:30,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:03:38] 2025-11-24 21:03:31,874 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:03:38] 2025-11-24 21:03:33,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562978924352)>', '<ExcThread(monitor, started 140562627798784)>']
[2025-11-24 22:03:38] 2025-11-24 21:03:33,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:03:38] 2025-11-24 21:03:33,423 | INFO     | [monitor] control thread has ended
[2025-11-24 22:03:38] 2025-11-24 21:03:38,029 | INFO     | all workflow threads have been joined
[2025-11-24 22:03:38] 2025-11-24 21:03:38,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:03:38] 2025-11-24 21:03:38,029 | INFO     | traces error code: 0
[2025-11-24 22:03:38] 2025-11-24 21:03:38,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:03:38] 2025-11-24 21:03:38,102 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:03:38] 2025-11-24 21:03:38,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:03:38] 2025-11-24 21:03:38,106 [wrapper] pilotpid: 3079057
[2025-11-24 22:03:38] 2025-11-24 21:03:38,108 [wrapper] Pilot exit status: 0
[2025-11-24 22:03:38] 2025-11-24 21:03:38,116 [wrapper] pandaids: 6894254342
[2025-11-24 22:03:38] 2025-11-24 21:03:38,141 [wrapper] cleanup supervisor_pilot 3265848 3079058
[2025-11-24 22:03:38] 2025-11-24 21:03:38,143 [wrapper] Test setup, not cleaning
[2025-11-24 22:03:38] 2025-11-24 21:03:38,145 [wrapper] apfmon messages muted
[2025-11-24 22:03:38] 2025-11-24 21:03:38,147 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:03:38] 2025-11-24 21:03:38,149 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:03:38]  *** Error codes and diagnostics ***
[2025-11-24 22:03:38]     "exeErrorCode": 0,
[2025-11-24 22:03:38]     "exeErrorDiag": "",
[2025-11-24 22:03:38]     "pilotErrorCode": 0,
[2025-11-24 22:03:38]     "pilotErrorDiag": "",
[2025-11-24 22:03:38]  *** Listing of results directory ***
[2025-11-24 22:03:38] total 1295956
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc      5112 Nov 21 03:51 queuedata.json
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc    576529 Nov 21 03:51 pilot3.tar.gz
[2025-11-24 22:03:38] -rwx------ 1 boinc boinc     36292 Nov 21 03:53 runpilot2-wrapper.sh
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc       100 Nov 24 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:03:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 18:07 run_atlas
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc       105 Nov 24 18:07 job.xml
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc      9445 Nov 24 18:07 init_data.xml
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc 407665722 Nov 24 18:07 EVNT.47493127._002140.pool.root.1
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 18:07 start_atlas.sh
[2025-11-24 22:03:38] drwxrwx--x 2 boinc boinc      4096 Nov 24 18:07 shared
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc    590102 Nov 24 18:07 input.tar.gz
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc         0 Nov 24 18:07 boinc_lockfile
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc      2786 Nov 24 18:07 pandaJob.out
[2025-11-24 22:03:38] -rw------- 1 boinc boinc    991965 Nov 24 18:07 agis_schedconf.cvmfs.json
[2025-11-24 22:03:38] drwx------ 5 boinc boinc      4096 Nov 24 18:07 pilot3
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc       532 Nov 24 21:57 boinc_task_state.xml
[2025-11-24 22:03:38] -rw------- 1 boinc boinc 907415677 Nov 24 22:02 HITS.47533967._001119.pool.root.1
[2025-11-24 22:03:38] -rw------- 1 boinc boinc      1036 Nov 24 22:02 memory_monitor_summary.json
[2025-11-24 22:03:38] -rw------- 1 boinc boinc        95 Nov 24 22:02 pilot_heartbeat.json
[2025-11-24 22:03:38] -rw------- 1 boinc boinc   1516227 Nov 24 22:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:03:38] -rw------- 1 boinc boinc   1968360 Nov 24 22:02 log.47533967._001119.job.log.tgz.1
[2025-11-24 22:03:38] -rw------- 1 boinc boinc      8591 Nov 24 22:02 heartbeat.json
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc        29 Nov 24 22:03 wrapper_checkpoint.txt
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc      8192 Nov 24 22:03 boinc_mmap_file
[2025-11-24 22:03:38] -rw------- 1 boinc boinc      4895 Nov 24 22:03 pilotlog.txt
[2025-11-24 22:03:38] -rw------- 1 boinc boinc   2056690 Nov 24 22:03 log.47533967._001119.job.log.1
[2025-11-24 22:03:38] -rw------- 1 boinc boinc       353 Nov 24 22:03 output.list
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc       620 Nov 24 22:03 runtime_log
[2025-11-24 22:03:38] -rw------- 1 boinc boinc   4044800 Nov 24 22:03 result.tar.gz
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc      8855 Nov 24 22:03 runtime_log.err
[2025-11-24 22:03:38] -rw------- 1 boinc boinc       668 Nov 24 22:03 MxZKDm3RWg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTuIKDmI08pNo.diag
[2025-11-24 22:03:38] -rw-r--r-- 1 boinc boinc     21309 Nov 24 22:03 stderr.txt
[2025-11-24 22:03:38] HITS file was successfully produced:
[2025-11-24 22:03:38] -rw------- 1 boinc boinc 907415677 Nov 24 22:02 shared/HITS.pool.root.1
[2025-11-24 22:03:38]  *** Contents of shared directory: ***
[2025-11-24 22:03:38] total 1288820
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc 407665722 Nov 24 18:07 ATLAS.root_0
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 18:07 start_atlas.sh
[2025-11-24 22:03:38] -rw-r--r-- 2 boinc boinc    590102 Nov 24 18:07 input.tar.gz
[2025-11-24 22:03:38] -rw------- 1 boinc boinc 907415677 Nov 24 22:02 HITS.pool.root.1
[2025-11-24 22:03:38] -rw------- 1 boinc boinc   4044800 Nov 24 22:03 result.tar.gz
22:03:39 (3075196): run_atlas exited; CPU time 164775.968345
22:03:39 (3075196): called boinc_finish(0)

</stderr_txt>
]]>

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