Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:31 (718740): wrapper (7.7.26015): starting
13:28:31 (718740): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 13:28:31] Arguments: --nthreads 3
[2025-11-25 13:28:31] Threads: 3
[2025-11-25 13:28:31] Checking for CVMFS
[2025-11-25 13:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:28:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:28:31] 2.9.2.0 3581133 9907 102472 153281 0 81 27864796 36864000 0 130560 1 3678724 99.850 617318 1047 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 13:28:31] CVMFS is ok
[2025-11-25 13:28:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:28:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:28:31] Further information can be found at the LHC@home message board.
[2025-11-25 13:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:28:31] Checking for apptainer binary...
[2025-11-25 13:28:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:28:31] Running /usr/bin/apptainer --version
[2025-11-25 13:28:31] apptainer version 1.4.1-1.1
[2025-11-25 13:28:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:28:31] magicA250a
[2025-11-25 13:28:31] apptainer works
[2025-11-25 13:28:31] Set ATHENA_PROC_NUMBER=3
[2025-11-25 13:28:31] Set ATHENA_CORE_NUMBER=3
[2025-11-25 13:28:31] Starting ATLAS job with PandaID=6895328332
[2025-11-25 13:28:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:44:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:44:40] 2025-11-25 20:44:09,638 | INFO     | architecture information:
[2025-11-25 21:44:40] 2025-11-25 20:44:09,638 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:44:40] 2025-11-25 20:44:09,647 | INFO     | cat /etc/os-release:
[2025-11-25 21:44:40] NAME="CentOS Linux"
[2025-11-25 21:44:40] VERSION="7 (Core)"
[2025-11-25 21:44:40] ID="centos"
[2025-11-25 21:44:40] ID_LIKE="rhel fedora"
[2025-11-25 21:44:40] VERSION_ID="7"
[2025-11-25 21:44:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:44:40] ANSI_COLOR="0;31"
[2025-11-25 21:44:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:44:40] HOME_URL="https://www.centos.org/"
[2025-11-25 21:44:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:44:40] 
[2025-11-25 21:44:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:44:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:44:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:44:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:44:40] 
[2025-11-25 21:44:40] 2025-11-25 20:44:09,647 | INFO     | ***************************************
[2025-11-25 21:44:40] 2025-11-25 20:44:10,150 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 21:44:40] 2025-11-25 20:44:10,162 | INFO     | sufficient remaining disk space (329235038208 B)
[2025-11-25 21:44:40] 2025-11-25 20:44:10,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:44:40] 2025-11-25 20:44:10,163 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:44:40] 2025-11-25 20:44:10,163 | INFO     | update_server=False
[2025-11-25 21:44:40] 2025-11-25 20:44:10,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:44:40] 2025-11-25 20:44:10,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:44:40] 2025-11-25 20:44:10,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:44:40] 2025-11-25 20:44:10,169 | INFO     | aborting loop
[2025-11-25 21:44:40] 2025-11-25 20:44:10,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:44:40] 2025-11-25 20:44:10,758 | INFO     | all data control threads have been joined
[2025-11-25 21:44:40] 2025-11-25 20:44:11,168 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,169 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,174 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,270 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:44:40] 2025-11-25 20:44:11,313 | INFO     | all job control threads have been joined
[2025-11-25 21:44:40] 2025-11-25 20:44:11,558 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,574 | INFO     | all payload control threads have been joined
[2025-11-25 21:44:40] 2025-11-25 20:44:11,600 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,636 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:11,763 | INFO     | [data] control thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,177 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,177 | INFO     | [job] validate thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,319 | INFO     | [job] control thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,412 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,473 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,491 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:12,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:44:40] 2025-11-25 20:44:12,579 | INFO     | [payload] control thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:16,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:20,669 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:44:40] 2025-11-25 20:44:21,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:44:40] 2025-11-25 20:44:23,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911468533568)>', '<ExcThread(monitor, started 139911187367680)>']
[2025-11-25 21:44:40] 2025-11-25 20:44:28,272 | INFO     | all workflow threads have been joined
[2025-11-25 21:44:40] 2025-11-25 20:44:28,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:44:40] 2025-11-25 20:44:28,272 | INFO     | traces error code: 0
[2025-11-25 21:44:40] 2025-11-25 20:44:28,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | INFO     | PID=722466 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:44:40] 2025-11-25 20:44:40,785 | INFO     | [monitor] control thread has ended
[2025-11-25 21:44:40] 2025-11-25 20:44:40,832 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:44:40] 2025-11-25 20:44:40,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:44:40] 2025-11-25 20:44:40,836 [wrapper] pilotpid: 722466
[2025-11-25 21:44:40] 2025-11-25 20:44:40,838 [wrapper] Pilot exit status: 0
[2025-11-25 21:44:40] 2025-11-25 20:44:40,845 [wrapper] pandaids: 6895328332
[2025-11-25 21:44:40] 2025-11-25 20:44:40,861 [wrapper] cleanup supervisor_pilot  781248 722467
[2025-11-25 21:44:40] 2025-11-25 20:44:40,863 [wrapper] Test setup, not cleaning
[2025-11-25 21:44:40] 2025-11-25 20:44:40,865 [wrapper] apfmon messages muted
[2025-11-25 21:44:40] 2025-11-25 20:44:40,867 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:44:40] 2025-11-25 20:44:40,870 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:44:40]  *** Error codes and diagnostics ***
[2025-11-25 21:44:40]     "exeErrorCode": 0,
[2025-11-25 21:44:40]     "exeErrorDiag": "",
[2025-11-25 21:44:40]     "pilotErrorCode": 0,
[2025-11-25 21:44:40]     "pilotErrorDiag": "",
[2025-11-25 21:44:40]  *** Listing of results directory ***
[2025-11-25 21:44:40] total 1319096
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:49 pilot3.tar.gz
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:54 queuedata.json
[2025-11-25 21:44:40] -rwx------ 1 boinc boinc     36292 Nov 21 17:56 runpilot2-wrapper.sh
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc       100 Nov 25 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:44:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 13:28 run_atlas
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc       105 Nov 25 13:28 job.xml
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc 410485161 Nov 25 13:28 EVNT.47483658._000072.pool.root.1
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc    590099 Nov 25 13:28 input.tar.gz
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:28 start_atlas.sh
[2025-11-25 21:44:40] drwxrwx--x 2 boinc boinc      4096 Nov 25 13:28 shared
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc         0 Nov 25 13:28 boinc_setup_complete
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      6443 Nov 25 13:28 init_data.xml
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc         0 Nov 25 13:28 boinc_lockfile
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      2783 Nov 25 13:28 pandaJob.out
[2025-11-25 21:44:40] -rw------- 1 boinc boinc    991894 Nov 25 13:28 agis_schedconf.cvmfs.json
[2025-11-25 21:44:40] drwx------ 5 boinc boinc      4096 Nov 25 13:28 pilot3
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc       531 Nov 25 21:40 boinc_task_state.xml
[2025-11-25 21:44:40] -rw------- 1 boinc boinc 925641375 Nov 25 21:43 HITS.47556137._000714.pool.root.1
[2025-11-25 21:44:40] -rw------- 1 boinc boinc      1028 Nov 25 21:43 memory_monitor_summary.json
[2025-11-25 21:44:40] -rw------- 1 boinc boinc   1516240 Nov 25 21:43 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:44:40] -rw------- 1 boinc boinc   1182100 Nov 25 21:43 log.47556137._000714.job.log.tgz.1
[2025-11-25 21:44:40] -rw------- 1 boinc boinc        95 Nov 25 21:44 pilot_heartbeat.json
[2025-11-25 21:44:40] -rw------- 1 boinc boinc      8570 Nov 25 21:44 heartbeat.json
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      8192 Nov 25 21:44 boinc_mmap_file
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc        28 Nov 25 21:44 wrapper_checkpoint.txt
[2025-11-25 21:44:40] -rw------- 1 boinc boinc       746 Nov 25 21:44 pilotlog.txt
[2025-11-25 21:44:40] -rw------- 1 boinc boinc   4179519 Nov 25 21:44 log.47556137._000714.job.log.1
[2025-11-25 21:44:40] -rw------- 1 boinc boinc       353 Nov 25 21:44 output.list
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc       620 Nov 25 21:44 runtime_log
[2025-11-25 21:44:40] -rw------- 1 boinc boinc   5386240 Nov 25 21:44 result.tar.gz
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      8918 Nov 25 21:44 runtime_log.err
[2025-11-25 21:44:40] -rw------- 1 boinc boinc       669 Nov 25 21:44 csMKDmHcjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZZJKDmOquEWm.diag
[2025-11-25 21:44:40] -rw-r--r-- 1 boinc boinc      9065 Nov 25 21:44 stderr.txt
[2025-11-25 21:44:40] HITS file was successfully produced:
[2025-11-25 21:44:40] -rw------- 1 boinc boinc 925641375 Nov 25 21:43 shared/HITS.pool.root.1
[2025-11-25 21:44:40]  *** Contents of shared directory: ***
[2025-11-25 21:44:40] total 1310676
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc 410485161 Nov 25 13:28 ATLAS.root_0
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc    590099 Nov 25 13:28 input.tar.gz
[2025-11-25 21:44:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:28 start_atlas.sh
[2025-11-25 21:44:40] -rw------- 1 boinc boinc 925641375 Nov 25 21:43 HITS.pool.root.1
[2025-11-25 21:44:40] -rw------- 1 boinc boinc   5386240 Nov 25 21:44 result.tar.gz
21:44:42 (718740): run_atlas exited; CPU time 87835.043065
21:44:42 (718740): called boinc_finish(0)

</stderr_txt>
]]>

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