Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:39 (32015): wrapper (7.7.26015): starting
20:13:39 (32015): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 20:13:39] Arguments: --nthreads 8
[2025-11-22 20:13:39] Threads: 8
[2025-11-22 20:13:39] Checking for CVMFS
[2025-11-22 20:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:13:40] 2.11.2.0 2934 171829 79404 153192 4 1 14054102 20275201 1 130560 1 64909669 99.950 7866711 22960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:13:40] CVMFS is ok
[2025-11-22 20:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:13:40] Further information can be found at the LHC@home message board.
[2025-11-22 20:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:13:40] Checking for apptainer binary...
[2025-11-22 20:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:13:40] Running /usr/bin/apptainer --version
[2025-11-22 20:13:40] apptainer version 1.3.2-1.el7
[2025-11-22 20:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:13:42] c-204-33.aglt2.org
[2025-11-22 20:13:42] apptainer works
[2025-11-22 20:13:42] Set ATHENA_PROC_NUMBER=8
[2025-11-22 20:13:42] Set ATHENA_CORE_NUMBER=8
[2025-11-22 20:13:42] Starting ATLAS job with PandaID=6895327160
[2025-11-22 20:13:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 08:42:29]  *** The last 200 lines of the pilot log: ***
[2025-11-23 08:42:29] 2025-11-23 13:41:55,709 | INFO     | monitor loop #3301: job 0:6895327160 is in state 'finished'
[2025-11-23 08:42:29] 2025-11-23 13:41:55,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 08:42:29] 2025-11-23 13:41:55,921 | INFO     | time since job start (44874s) is within the limit (172800.0s)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,582 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 08:42:29] 2025-11-23 13:41:56,586 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 08:42:29] 2025-11-23 13:41:56,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895327160/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,588 | INFO     | extracted standard info from prmon json
[2025-11-23 08:42:29] 2025-11-23 13:41:56,588 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 08:42:29] 2025-11-23 13:41:56,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 08:42:29] 2025-11-23 13:41:56,602 | INFO     | fitting pss+swap vs Time
[2025-11-23 08:42:29] 2025-11-23 13:41:56,603 | INFO     | sum of square deviations: 123123748160.99864
[2025-11-23 08:42:29] 2025-11-23 13:41:56,615 | INFO     | sum of deviations: 800642541080.6504
[2025-11-23 08:42:29] 2025-11-23 13:41:56,615 | INFO     | mean x: 1763882860.531973
[2025-11-23 08:42:29] 2025-11-23 13:41:56,615 | INFO     | mean y: 2877275.185034014
[2025-11-23 08:42:29] 2025-11-23 13:41:56,615 | INFO     | intersect: -11467206089.871862
[2025-11-23 08:42:29] 2025-11-23 13:41:56,616 | INFO     | chi2: 5.515539830457883
[2025-11-23 08:42:29] 2025-11-23 13:41:56,617 | INFO     | sum of square deviations: 120628202017.07431
[2025-11-23 08:42:29] 2025-11-23 13:41:56,631 | INFO     | sum of deviations: 1029753403235.325
[2025-11-23 08:42:29] 2025-11-23 13:41:56,631 | INFO     | mean x: 1763882708.0356164
[2025-11-23 08:42:29] 2025-11-23 13:41:56,631 | INFO     | mean y: 2891269.0643835617
[2025-11-23 08:42:29] 2025-11-23 13:41:56,631 | INFO     | intersect: -15054650757.886492
[2025-11-23 08:42:29] 2025-11-23 13:41:56,632 | INFO     | chi2: 2.5724437228891714
[2025-11-23 08:42:29] 2025-11-23 13:41:56,632 | INFO     | current chi2=2.5724437228891714 (change=53.360073502077945 %)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,633 | INFO     | sum of square deviations: 118166521304.2815
[2025-11-23 08:42:29] 2025-11-23 13:41:56,645 | INFO     | sum of deviations: 1051914349282.4
[2025-11-23 08:42:29] 2025-11-23 13:41:56,646 | INFO     | mean x: 1763882555.5365517
[2025-11-23 08:42:29] 2025-11-23 13:41:56,646 | INFO     | mean y: 2892634.4
[2025-11-23 08:42:29] 2025-11-23 13:41:56,646 | INFO     | intersect: -15699129817.796707
[2025-11-23 08:42:29] 2025-11-23 13:41:56,647 | INFO     | chi2: 2.4526117909551504
[2025-11-23 08:42:29] 2025-11-23 13:41:56,647 | INFO     | current chi2=2.4526117909551504 (change=4.658291680699434 %)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,647 | INFO     | right removable region: 724
[2025-11-23 08:42:29] 2025-11-23 13:41:56,648 | INFO     | sum of square deviations: 120627963507.07407
[2025-11-23 08:42:29] 2025-11-23 13:41:56,661 | INFO     | sum of deviations: 599217060150.3235
[2025-11-23 08:42:29] 2025-11-23 13:41:56,661 | INFO     | mean x: 1763883013.0356164
[2025-11-23 08:42:29] 2025-11-23 13:41:56,661 | INFO     | mean y: 2889561.5260273973
[2025-11-23 08:42:29] 2025-11-23 13:41:56,661 | INFO     | intersect: -8759164963.735964
[2025-11-23 08:42:29] 2025-11-23 13:41:56,662 | INFO     | chi2: 3.2172414653072345
[2025-11-23 08:42:29] 2025-11-23 13:41:56,662 | INFO     | current chi2=3.2172414653072345 (change=41.66950898367189 %)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,663 | INFO     | sum of square deviations: 118166177630.20717
[2025-11-23 08:42:29] 2025-11-23 13:41:56,674 | INFO     | sum of deviations: 555196747092.8756
[2025-11-23 08:42:29] 2025-11-23 13:41:56,674 | INFO     | mean x: 1763883165.537931
[2025-11-23 08:42:29] 2025-11-23 13:41:56,675 | INFO     | mean y: 2892287.0772413793
[2025-11-23 08:42:29] 2025-11-23 13:41:56,675 | INFO     | intersect: -8284607701.482951
[2025-11-23 08:42:29] 2025-11-23 13:41:56,676 | INFO     | chi2: 3.1700035185058897
[2025-11-23 08:42:29] 2025-11-23 13:41:56,676 | INFO     | current chi2=3.1700035185058897 (change=1.4682748345354242 %)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,676 | INFO     | left removable region: 20
[2025-11-23 08:42:29] 2025-11-23 13:41:56,677 | INFO     | sum of square deviations: 108192458390.35779
[2025-11-23 08:42:29] 2025-11-23 13:41:56,688 | INFO     | sum of deviations: 752077313892.6562
[2025-11-23 08:42:29] 2025-11-23 13:41:56,688 | INFO     | mean x: 1763883135.0482955
[2025-11-23 08:42:29] 2025-11-23 13:41:56,688 | INFO     | mean y: 2911283.921875
[2025-11-23 08:42:29] 2025-11-23 13:41:56,689 | INFO     | intersect: -12258354519.295195
[2025-11-23 08:42:29] 2025-11-23 13:41:56,689 | INFO     | chi2: 0.06955842105797237
[2025-11-23 08:42:29] 2025-11-23 13:41:56,689 | INFO     | current memory leak: 6.95 B/s (using 704 data points, chi2=0.07)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,690 | INFO     | could have reported an average CPU frequency of 2161 MHz (28 samples)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,690 | INFO     | ..............................
[2025-11-23 08:42:29] 2025-11-23 13:41:56,690 | INFO     | . Timing measurements:
[2025-11-23 08:42:29] 2025-11-23 13:41:56,690 | INFO     | . get job = 0 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . initial setup = 2 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . payload setup = 9 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . stage-in = 0 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . payload execution = 44835 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . stage-out = 3 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | . log creation = 0 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,691 | INFO     | ..............................
[2025-11-23 08:42:29] 2025-11-23 13:41:56,787 | INFO     | 
[2025-11-23 08:42:29] 2025-11-23 13:41:56,787 | INFO     | job summary report
[2025-11-23 08:42:29] 2025-11-23 13:41:56,787 | INFO     | --------------------------------------------------
[2025-11-23 08:42:29] 2025-11-23 13:41:56,787 | INFO     | PanDA job id: 6895327160
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | task id: 47556137
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | errors: (none)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | pilot state: finished 
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | transexitcode: 0
[2025-11-23 08:42:29] 2025-11-23 13:41:56,788 | INFO     | exeerrorcode: 0
[2025-11-23 08:42:29] 2025-11-23 13:41:56,789 | INFO     | exeerrordiag: 
[2025-11-23 08:42:29] 2025-11-23 13:41:56,789 | INFO     | exitcode: 0
[2025-11-23 08:42:29] 2025-11-23 13:41:56,789 | INFO     | exitmsg: OK
[2025-11-23 08:42:29] 2025-11-23 13:41:56,789 | INFO     | cpuconsumptiontime: 347098 s
[2025-11-23 08:42:29] 2025-11-23 13:41:56,789 | INFO     | nevents: 1000
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | neventsw: 0
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | pid: 10202
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | pgrp: 10202
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | corecount: 8
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | event service: False
[2025-11-23 08:42:29] 2025-11-23 13:41:56,790 | INFO     | sizes: {0: 2298803, 6: 2299065, 11: 2299093, 44847: 2344989, 44851: 2354039, 44858: 2354229}
[2025-11-23 08:42:29] 2025-11-23 13:41:56,791 | INFO     | --------------------------------------------------
[2025-11-23 08:42:29] 2025-11-23 13:41:56,791 | INFO     | 
[2025-11-23 08:42:29] 2025-11-23 13:41:56,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 08:42:29] 2025-11-23 13:41:56,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 08:42:29] 2025-11-23 13:41:56,824 | INFO     | job 6895327160 has completed (purged errors)
[2025-11-23 08:42:29] 2025-11-23 13:41:56,824 | INFO     | overall cleanup function is called
[2025-11-23 08:42:29] 2025-11-23 13:41:57,840 | INFO     | --- collectZombieJob: --- 10, [10202]
[2025-11-23 08:42:29] 2025-11-23 13:41:57,840 | INFO     | zombie collector waiting for pid 10202
[2025-11-23 08:42:29] 2025-11-23 13:41:57,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 08:42:29] 2025-11-23 13:41:57,845 | INFO     | collected zombie processes
[2025-11-23 08:42:29] 2025-11-23 13:41:57,845 | INFO     | will attempt to kill all subprocesses of pid=10202
[2025-11-23 08:42:29] 2025-11-23 13:41:57,935 | INFO     | process IDs to be killed: [10202] (in reverse order)
[2025-11-23 08:42:29] 2025-11-23 13:41:57,990 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 08:42:29] 2025-11-23 13:41:57,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 08:42:29] 2025-11-23 13:41:57,995 | INFO     | did not find any defunct processes belonging to 10202
[2025-11-23 08:42:29] 2025-11-23 13:41:57,998 | INFO     | did not find any defunct processes belonging to 10202
[2025-11-23 08:42:29] 2025-11-23 13:41:58,000 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 08:42:29] 2025-11-23 13:41:58,000 | INFO     | ready for new job
[2025-11-23 08:42:29] 2025-11-23 13:41:58,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 08:42:29] 2025-11-23 13:41:58,003 | INFO     | ***************************************
[2025-11-23 08:42:29] 2025-11-23 13:41:58,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 08:42:29] 2025-11-23 13:41:58,004 | INFO     | ***************************************
[2025-11-23 08:42:29] 2025-11-23 13:41:58,004 | INFO     | 
[2025-11-23 08:42:29] 2025-11-23 13:41:58,004 | INFO     | architecture information:
[2025-11-23 08:42:29] 2025-11-23 13:41:58,005 | INFO     | executing command: cat /etc/os-release
[2025-11-23 08:42:29] 2025-11-23 13:41:58,022 | INFO     | cat /etc/os-release:
[2025-11-23 08:42:29] NAME="CentOS Linux"
[2025-11-23 08:42:29] VERSION="7 (Core)"
[2025-11-23 08:42:29] ID="centos"
[2025-11-23 08:42:29] ID_LIKE="rhel fedora"
[2025-11-23 08:42:29] VERSION_ID="7"
[2025-11-23 08:42:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 08:42:29] ANSI_COLOR="0;31"
[2025-11-23 08:42:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 08:42:29] HOME_URL="https://www.centos.org/"
[2025-11-23 08:42:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 08:42:29] 
[2025-11-23 08:42:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 08:42:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 08:42:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 08:42:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 08:42:29] 
[2025-11-23 08:42:29] 2025-11-23 13:41:58,023 | INFO     | ***************************************
[2025-11-23 08:42:29] 2025-11-23 13:41:58,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 08:42:29] 2025-11-23 13:41:58,545 | INFO     | sufficient remaining disk space (17465081856 B)
[2025-11-23 08:42:29] 2025-11-23 13:41:58,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 08:42:29] 2025-11-23 13:41:58,546 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 08:42:29] 2025-11-23 13:41:58,546 | INFO     | update_server=False
[2025-11-23 08:42:29] 2025-11-23 13:41:58,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 08:42:29] 2025-11-23 13:41:58,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:42:29] 2025-11-23 13:41:58,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 08:42:29] 2025-11-23 13:41:58,646 | INFO     | all data control threads have been joined
[2025-11-23 08:42:29] 2025-11-23 13:41:59,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:42:29] 2025-11-23 13:41:59,223 | INFO     | aborting loop
[2025-11-23 08:42:29] 2025-11-23 13:41:59,436 | INFO     | all job control threads have been joined
[2025-11-23 08:42:29] 2025-11-23 13:41:59,552 | INFO     | [job] retrieve thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:41:59,552 | INFO     | [job] queue monitor thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:41:59,589 | INFO     | all payload control threads have been joined
[2025-11-23 08:42:29] 2025-11-23 13:41:59,648 | INFO     | [data] control thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:41:59,827 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:41:59,827 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:41:59,933 | INFO     | [payload] validate_post thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,229 | INFO     | [job] job monitor thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,442 | INFO     | [job] control thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 08:42:29] 2025-11-23 13:42:00,541 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,553 | INFO     | [data] copytool_out thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,595 | INFO     | [payload] control thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,620 | INFO     | [payload] failed_post thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,937 | INFO     | [data] copytool_in thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:00,938 | INFO     | [job] validate thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:04,517 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:08,811 | INFO     | job.realtimelogging is not enabled
[2025-11-23 08:42:29] 2025-11-23 13:42:09,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 08:42:29] 2025-11-23 13:42:15,402 | INFO     | [monitor] cgroup control has ended
[2025-11-23 08:42:29] 2025-11-23 13:42:17,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506157496128)>', '<ExcThread(monitor, started 140505493010176)>']
[2025-11-23 08:42:29] 2025-11-23 13:42:22,147 | INFO     | all workflow threads have been joined
[2025-11-23 08:42:29] 2025-11-23 13:42:22,147 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 08:42:29] 2025-11-23 13:42:22,148 | INFO     | traces error code: 0
[2025-11-23 08:42:29] 2025-11-23 13:42:22,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 08:42:29] 2025-11-23 13:42:29,135 | INFO     | PID=3767 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 08:42:29] 2025-11-23 13:42:29,135 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 08:42:29] 2025-11-23 13:42:29,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 08:42:29] 2025-11-23 13:42:29,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 08:42:29] 2025-11-23 13:42:29,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 08:42:29] 2025-11-23 13:42:29,136 | INFO     | [monitor] control thread has ended
[2025-11-23 08:42:29] 2025-11-23 13:42:29,243 [wrapper] ==== pilot stdout END ====
[2025-11-23 08:42:29] 2025-11-23 13:42:29,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 08:42:29] 2025-11-23 13:42:29,251 [wrapper] pilotpid: 3767
[2025-11-23 08:42:29] 2025-11-23 13:42:29,256 [wrapper] Pilot exit status: 0
[2025-11-23 08:42:29] 2025-11-23 13:42:29,272 [wrapper] pandaids: 6895327160
[2025-11-23 08:42:29] 2025-11-23 13:42:29,312 [wrapper] cleanup supervisor_pilot  3439 3768
[2025-11-23 08:42:29] 2025-11-23 13:42:29,316 [wrapper] Test setup, not cleaning
[2025-11-23 08:42:29] 2025-11-23 13:42:29,321 [wrapper] apfmon messages muted
[2025-11-23 08:42:29] 2025-11-23 13:42:29,325 [wrapper] ==== wrapper stdout END ====
[2025-11-23 08:42:29] 2025-11-23 13:42:29,330 [wrapper] ==== wrapper stderr END ====
[2025-11-23 08:42:29]  *** Error codes and diagnostics ***
[2025-11-23 08:42:29]     "exeErrorCode": 0,
[2025-11-23 08:42:29]     "exeErrorDiag": "",
[2025-11-23 08:42:29]     "pilotErrorCode": 0,
[2025-11-23 08:42:29]     "pilotErrorDiag": "",
[2025-11-23 08:42:29]  *** Listing of results directory ***
[2025-11-23 08:42:29] total 1318524
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 10:23 pilot3.tar.gz
[2025-11-23 08:42:29] -rwx------ 1 boincer umatlas     36292 Nov 21 10:42 runpilot2-wrapper.sh
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 10:42 queuedata.json
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas       100 Nov 22 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 08:42:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 20:13 run_atlas
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas       105 Nov 22 20:13 job.xml
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas 412552383 Nov 22 20:13 EVNT.47483658._000045.pool.root.1
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:13 start_atlas.sh
[2025-11-23 08:42:29] drwxrwx--x 2 boincer umatlas      4096 Nov 22 20:13 shared
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 20:13 input.tar.gz
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas         0 Nov 22 20:13 boinc_lockfile
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 20:13 pandaJob.out
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas        57 Nov 22 20:13 setup.sh.local
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas    989784 Nov 22 20:13 agis_schedconf.cvmfs.json
[2025-11-23 08:42:29] drwx------ 5 boincer umatlas      4096 Nov 22 20:14 pilot3
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas       533 Nov 23 08:33 boinc_task_state.xml
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 08:40 init_data.xml
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas 917373236 Nov 23 08:41 HITS.47556137._000446.pool.root.1
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas      1062 Nov 23 08:41 memory_monitor_summary.json
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas   1526164 Nov 23 08:41 agis_ddmendpoints.agis.ALL.json
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas   1985370 Nov 23 08:41 log.47556137._000446.job.log.tgz.1
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas      8655 Nov 23 08:41 heartbeat.json
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas        29 Nov 23 08:42 wrapper_checkpoint.txt
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 08:42 boinc_mmap_file
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas        95 Nov 23 08:42 pilot_heartbeat.json
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas       744 Nov 23 08:42 pilotlog.txt
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas   6175744 Nov 23 08:42 log.47556137._000446.job.log.1
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas       353 Nov 23 08:42 output.list
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas       620 Nov 23 08:42 runtime_log
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas   8181760 Nov 23 08:42 result.tar.gz
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 08:42 runtime_log.err
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas       668 Nov 23 08:42 FpZKDmQSig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfhHKDmvqrc9n.diag
[2025-11-23 08:42:29] -rw-r--r-- 1 boincer umatlas     21249 Nov 23 08:42 stderr.txt
[2025-11-23 08:42:29] HITS file was successfully produced:
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas 917373236 Nov 23 08:41 shared/HITS.pool.root.1
[2025-11-23 08:42:29]  *** Contents of shared directory: ***
[2025-11-23 08:42:29] total 1307352
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas 412552383 Nov 22 20:13 ATLAS.root_0
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:13 start_atlas.sh
[2025-11-23 08:42:29] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 20:13 input.tar.gz
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas 917373236 Nov 23 08:41 HITS.pool.root.1
[2025-11-23 08:42:29] -rw------- 1 boincer umatlas   8181760 Nov 23 08:42 result.tar.gz
08:42:31 (32015): run_atlas exited; CPU time 343253.105141
08:42:31 (32015): called boinc_finish(0)

</stderr_txt>
]]>

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