Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:45 (31888): wrapper (7.7.26015): starting
20:03:45 (31888): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 20:03:45] Arguments: --nthreads 12
[2025-11-22 20:03:45] Threads: 12
[2025-11-22 20:03:45] Checking for CVMFS
[2025-11-22 20:03:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:03:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:03:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:03:45] 2.11.2.0 3165 68298 95744 153191 3 81 11416805 20275201 1 130560 0 28437243 99.928 3343749 35569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:03:45] CVMFS is ok
[2025-11-22 20:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:03:45] Further information can be found at the LHC@home message board.
[2025-11-22 20:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:03:45] Checking for apptainer binary...
[2025-11-22 20:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:03:45] Running /usr/bin/apptainer --version
[2025-11-22 20:03:45] apptainer version 1.3.2-1.el7
[2025-11-22 20:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:03:47] c-115-40.aglt2.org
[2025-11-22 20:03:47] apptainer works
[2025-11-22 20:03:47] Set ATHENA_PROC_NUMBER=12
[2025-11-22 20:03:47] Set ATHENA_CORE_NUMBER=12
[2025-11-22 20:03:47] Starting ATLAS job with PandaID=6895327981
[2025-11-22 20:03:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:38:46]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:38:46] 2025-11-23 07:38:09,870 | INFO     | time since job start (23648s) is within the limit (172800.0s)
[2025-11-23 02:38:46] 2025-11-23 07:38:11,305 | INFO     | monitor loop #1767: job 0:6895327981 is in state 'finished'
[2025-11-23 02:38:46] 2025-11-23 07:38:11,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:38:46] 2025-11-23 07:38:11,875 | INFO     | time since job start (23650s) is within the limit (172800.0s)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,576 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 02:38:46] 2025-11-23 07:38:12,580 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-23 02:38:46] 2025-11-23 07:38:12,583 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895327981/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,583 | INFO     | extracted standard info from prmon json
[2025-11-23 02:38:46] 2025-11-23 07:38:12,583 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:38:46] 2025-11-23 07:38:12,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:38:46] 2025-11-23 07:38:12,589 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:38:46] 2025-11-23 07:38:12,590 | INFO     | sum of square deviations: 17972431281.679573
[2025-11-23 02:38:46] 2025-11-23 07:38:12,592 | INFO     | sum of deviations: 301342777244.7933
[2025-11-23 02:38:46] 2025-11-23 07:38:12,593 | INFO     | mean x: 1763871643.1989665
[2025-11-23 02:38:46] 2025-11-23 07:38:12,593 | INFO     | mean y: 4062857.4832041343
[2025-11-23 02:38:46] 2025-11-23 07:38:12,593 | INFO     | intersect: -29570676994.58876
[2025-11-23 02:38:46] 2025-11-23 07:38:12,593 | INFO     | chi2: 5.89900869987809
[2025-11-23 02:38:46] 2025-11-23 07:38:12,594 | INFO     | sum of square deviations: 17284804663.979076
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | sum of deviations: 472387856634.2356
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | mean x: 1763871490.7015707
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | mean y: 4100753.607329843
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | intersect: -48201909616.13518
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | chi2: 3.061739293861099
[2025-11-23 02:38:46] 2025-11-23 07:38:12,597 | INFO     | current chi2=3.061739293861099 (change=48.09739314464185 %)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,598 | INFO     | sum of square deviations: 16614945821.273254
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | sum of deviations: 535544306385.31805
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | mean x: 1763871338.2042441
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | mean y: 4115067.801061008
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | intersect: -56850193247.9118
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | chi2: 2.4463780828181125
[2025-11-23 02:38:46] 2025-11-23 07:38:12,601 | INFO     | current chi2=2.4463780828181125 (change=20.09841962301652 %)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,602 | INFO     | right removable region: 376
[2025-11-23 02:38:46] 2025-11-23 07:38:12,602 | INFO     | sum of square deviations: 17284757693.979073
[2025-11-23 02:38:46] 2025-11-23 07:38:12,605 | INFO     | sum of deviations: 157479707954.70148
[2025-11-23 02:38:46] 2025-11-23 07:38:12,605 | INFO     | mean x: 1763871795.7015707
[2025-11-23 02:38:46] 2025-11-23 07:38:12,605 | INFO     | mean y: 4094634.497382199
[2025-11-23 02:38:46] 2025-11-23 07:38:12,605 | INFO     | intersect: -16066365835.618279
[2025-11-23 02:38:46] 2025-11-23 07:38:12,606 | INFO     | chi2: 3.5973315066591596
[2025-11-23 02:38:46] 2025-11-23 07:38:12,606 | INFO     | current chi2=3.5973315066591596 (change=39.01803354293234 %)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,606 | INFO     | sum of square deviations: 16614851881.273256
[2025-11-23 02:38:46] 2025-11-23 07:38:12,609 | INFO     | sum of deviations: 127839028007.55168
[2025-11-23 02:38:46] 2025-11-23 07:38:12,609 | INFO     | mean x: 1763871948.2042441
[2025-11-23 02:38:46] 2025-11-23 07:38:12,609 | INFO     | mean y: 4101370.6551724137
[2025-11-23 02:38:46] 2025-11-23 07:38:12,609 | INFO     | intersect: -13567592015.451431
[2025-11-23 02:38:46] 2025-11-23 07:38:12,610 | INFO     | chi2: 3.5562872699993946
[2025-11-23 02:38:46] 2025-11-23 07:38:12,610 | INFO     | current chi2=3.5562872699993946 (change=1.1409634220195275 %)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,610 | INFO     | left removable region: 20
[2025-11-23 02:38:46] 2025-11-23 07:38:12,610 | INFO     | sum of square deviations: 13990194081.617922
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | sum of deviations: 310104381459.62885
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | mean x: 1763871917.7078652
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | mean y: 4167627.025280899
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | intersect: -39093532292.19913
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | chi2: 0.03444198174748055
[2025-11-23 02:38:46] 2025-11-23 07:38:12,614 | INFO     | current memory leak: 22.17 B/s (using 356 data points, chi2=0.03)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | could have reported an average CPU frequency of 2527 MHz (17 samples)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | ..............................
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | . Timing measurements:
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | . get job = 0 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | . initial setup = 2 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | . payload setup = 7 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,615 | INFO     | . stage-in = 0 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,616 | INFO     | . payload execution = 23611 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,616 | INFO     | . stage-out = 3 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,616 | INFO     | . log creation = 0 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,616 | INFO     | ..............................
[2025-11-23 02:38:46] 2025-11-23 07:38:12,689 | INFO     | 
[2025-11-23 02:38:46] 2025-11-23 07:38:12,689 | INFO     | job summary report
[2025-11-23 02:38:46] 2025-11-23 07:38:12,689 | INFO     | --------------------------------------------------
[2025-11-23 02:38:46] 2025-11-23 07:38:12,689 | INFO     | PanDA job id: 6895327981
[2025-11-23 02:38:46] 2025-11-23 07:38:12,689 | INFO     | task id: 47556137
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | errors: (none)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | pilot state: finished 
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | transexitcode: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | exeerrorcode: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:12,690 | INFO     | exeerrordiag: 
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | exitcode: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | exitmsg: OK
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | cpuconsumptiontime: 271888 s
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | nevents: 1000
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | neventsw: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | pid: 9856
[2025-11-23 02:38:46] 2025-11-23 07:38:12,691 | INFO     | pgrp: 9856
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | corecount: 12
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | event service: False
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | sizes: {0: 2298576, 1: 2298831, 6: 2299093, 12: 2299121, 23622: 2335131, 23626: 2344125, 23628: 2344309, 23635: 2344619}
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | --------------------------------------------------
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | 
[2025-11-23 02:38:46] 2025-11-23 07:38:12,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 02:38:46] 2025-11-23 07:38:12,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:38:46] 2025-11-23 07:38:12,721 | INFO     | job 6895327981 has completed (purged errors)
[2025-11-23 02:38:46] 2025-11-23 07:38:12,721 | INFO     | overall cleanup function is called
[2025-11-23 02:38:46] 2025-11-23 07:38:13,737 | INFO     | --- collectZombieJob: --- 10, [9856]
[2025-11-23 02:38:46] 2025-11-23 07:38:13,737 | INFO     | zombie collector waiting for pid 9856
[2025-11-23 02:38:46] 2025-11-23 07:38:13,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:38:46] 2025-11-23 07:38:13,738 | INFO     | collected zombie processes
[2025-11-23 02:38:46] 2025-11-23 07:38:13,738 | INFO     | will attempt to kill all subprocesses of pid=9856
[2025-11-23 02:38:46] 2025-11-23 07:38:13,824 | INFO     | process IDs to be killed: [9856] (in reverse order)
[2025-11-23 02:38:46] 2025-11-23 07:38:13,879 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:38:46] 2025-11-23 07:38:13,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:38:46] 2025-11-23 07:38:13,884 | INFO     | did not find any defunct processes belonging to 9856
[2025-11-23 02:38:46] 2025-11-23 07:38:13,886 | INFO     | did not find any defunct processes belonging to 9856
[2025-11-23 02:38:46] 2025-11-23 07:38:13,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:38:46] 2025-11-23 07:38:13,888 | INFO     | ready for new job
[2025-11-23 02:38:46] 2025-11-23 07:38:13,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:38:46] 2025-11-23 07:38:13,890 | INFO     | ***************************************
[2025-11-23 02:38:46] 2025-11-23 07:38:13,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:38:46] 2025-11-23 07:38:13,890 | INFO     | ***************************************
[2025-11-23 02:38:46] 2025-11-23 07:38:13,891 | INFO     | 
[2025-11-23 02:38:46] 2025-11-23 07:38:13,891 | INFO     | architecture information:
[2025-11-23 02:38:46] 2025-11-23 07:38:13,892 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:38:46] 2025-11-23 07:38:13,908 | INFO     | cat /etc/os-release:
[2025-11-23 02:38:46] NAME="CentOS Linux"
[2025-11-23 02:38:46] VERSION="7 (Core)"
[2025-11-23 02:38:46] ID="centos"
[2025-11-23 02:38:46] ID_LIKE="rhel fedora"
[2025-11-23 02:38:46] VERSION_ID="7"
[2025-11-23 02:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:38:46] ANSI_COLOR="0;31"
[2025-11-23 02:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:38:46] HOME_URL="https://www.centos.org/"
[2025-11-23 02:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:38:46] 
[2025-11-23 02:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:38:46] 
[2025-11-23 02:38:46] 2025-11-23 07:38:13,909 | INFO     | ***************************************
[2025-11-23 02:38:46] 2025-11-23 07:38:14,412 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 02:38:46] 2025-11-23 07:38:14,429 | INFO     | sufficient remaining disk space (17581473792 B)
[2025-11-23 02:38:46] 2025-11-23 07:38:14,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:38:46] 2025-11-23 07:38:14,430 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:38:46] 2025-11-23 07:38:14,430 | INFO     | update_server=False
[2025-11-23 02:38:46] 2025-11-23 07:38:14,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:38:46] 2025-11-23 07:38:14,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:38:46] 2025-11-23 07:38:14,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:38:46] 2025-11-23 07:38:14,644 | INFO     | all job control threads have been joined
[2025-11-23 02:38:46] 2025-11-23 07:38:14,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:38:46] 2025-11-23 07:38:14,810 | INFO     | aborting loop
[2025-11-23 02:38:46] 2025-11-23 07:38:14,994 | INFO     | all payload control threads have been joined
[2025-11-23 02:38:46] 2025-11-23 07:38:15,419 | INFO     | all data control threads have been joined
[2025-11-23 02:38:46] 2025-11-23 07:38:15,436 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,437 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,474 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,474 | INFO     | [job] validate thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,476 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,528 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,584 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,650 | INFO     | [job] control thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:38:46] 2025-11-23 07:38:15,749 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,758 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:15,816 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:16,000 | INFO     | [payload] control thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:16,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:16,424 | INFO     | [data] control thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:16,432 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:19,744 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:38:46] 2025-11-23 07:38:40,053 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:38:46] 2025-11-23 07:38:41,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643028735808)>', '<ExcThread(monitor, started 139642431055616)>']
[2025-11-23 02:38:46] 2025-11-23 07:38:45,075 | INFO     | PID=3333 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 02:38:46] 2025-11-23 07:38:45,076 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:38:46] 2025-11-23 07:38:45,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:38:46] 2025-11-23 07:38:45,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:38:46] 2025-11-23 07:38:45,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:38:46] 2025-11-23 07:38:45,089 | INFO     | [monitor] control thread has ended
[2025-11-23 02:38:46] 2025-11-23 07:38:46,210 | INFO     | all workflow threads have been joined
[2025-11-23 02:38:46] 2025-11-23 07:38:46,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:38:46] 2025-11-23 07:38:46,211 | INFO     | traces error code: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:46,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:38:46] 2025-11-23 07:38:46,305 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:38:46] 2025-11-23 07:38:46,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:38:46] 2025-11-23 07:38:46,313 [wrapper] pilotpid: 3333
[2025-11-23 02:38:46] 2025-11-23 07:38:46,316 [wrapper] Pilot exit status: 0
[2025-11-23 02:38:46] 2025-11-23 07:38:46,330 [wrapper] pandaids: 6895327981
[2025-11-23 02:38:46] 2025-11-23 07:38:46,369 [wrapper] cleanup supervisor_pilot 29771 3334
[2025-11-23 02:38:46] 2025-11-23 07:38:46,373 [wrapper] Test setup, not cleaning
[2025-11-23 02:38:46] 2025-11-23 07:38:46,377 [wrapper] apfmon messages muted
[2025-11-23 02:38:46] 2025-11-23 07:38:46,381 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:38:46] 2025-11-23 07:38:46,385 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:38:46]  *** Error codes and diagnostics ***
[2025-11-23 02:38:46]     "exeErrorCode": 0,
[2025-11-23 02:38:46]     "exeErrorDiag": "",
[2025-11-23 02:38:46]     "pilotErrorCode": 0,
[2025-11-23 02:38:46]     "pilotErrorDiag": "",
[2025-11-23 02:38:46]  *** Listing of results directory ***
[2025-11-23 02:38:46] total 1320044
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 10:53 pilot3.tar.gz
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:11 queuedata.json
[2025-11-23 02:38:46] -rwx------ 1 boincer umatlas     36292 Nov 21 11:11 runpilot2-wrapper.sh
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas       100 Nov 22 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:38:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 20:03 run_atlas
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas       105 Nov 22 20:03 job.xml
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas 411509342 Nov 22 20:03 EVNT.47483658._000056.pool.root.1
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:03 start_atlas.sh
[2025-11-23 02:38:46] drwxrwx--x 2 boincer umatlas      4096 Nov 22 20:03 shared
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 20:03 input.tar.gz
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas         0 Nov 22 20:03 boinc_lockfile
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 20:03 pandaJob.out
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas        57 Nov 22 20:03 setup.sh.local
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas    989784 Nov 22 20:03 agis_schedconf.cvmfs.json
[2025-11-23 02:38:46] drwx------ 5 boincer umatlas      4096 Nov 22 20:04 pilot3
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas       533 Nov 23 02:27 boinc_task_state.xml
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas      5957 Nov 23 02:36 init_data.xml
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas 925349054 Nov 23 02:37 HITS.47556137._000560.pool.root.1
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas      1064 Nov 23 02:37 memory_monitor_summary.json
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas        95 Nov 23 02:37 pilot_heartbeat.json
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas   1526164 Nov 23 02:38 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas   2153053 Nov 23 02:38 log.47556137._000560.job.log.tgz.1
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas      8664 Nov 23 02:38 heartbeat.json
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas        29 Nov 23 02:38 wrapper_checkpoint.txt
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 02:38 boinc_mmap_file
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas      4745 Nov 23 02:38 pilotlog.txt
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas   3314814 Nov 23 02:38 log.47556137._000560.job.log.1
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas       353 Nov 23 02:38 output.list
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas       620 Nov 23 02:38 runtime_log
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas   5488640 Nov 23 02:38 result.tar.gz
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 02:38 runtime_log.err
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas       669 Nov 23 02:38 LOHODmauig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1iHKDmxKLnnn.diag
[2025-11-23 02:38:46] -rw-r--r-- 1 boincer umatlas     21316 Nov 23 02:38 stderr.txt
[2025-11-23 02:38:46] HITS file was successfully produced:
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas 925349054 Nov 23 02:37 shared/HITS.pool.root.1
[2025-11-23 02:38:46]  *** Contents of shared directory: ***
[2025-11-23 02:38:46] total 1311496
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas 411509342 Nov 22 20:03 ATLAS.root_0
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:03 start_atlas.sh
[2025-11-23 02:38:46] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 20:03 input.tar.gz
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas 925349054 Nov 23 02:37 HITS.pool.root.1
[2025-11-23 02:38:46] -rw------- 1 boincer umatlas   5488640 Nov 23 02:38 result.tar.gz
02:38:48 (31888): run_atlas exited; CPU time 268422.965411
02:38:48 (31888): called boinc_finish(0)

</stderr_txt>
]]>

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