Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:47:10 (30349): wrapper (7.7.26015): starting
19:47:10 (30349): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 19:47:10] Arguments: --nthreads 8
[2025-11-22 19:47:10] Threads: 8
[2025-11-22 19:47:10] Checking for CVMFS
[2025-11-22 19:47:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:47:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:47:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:47:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:47:10] 2.11.2.0 2466 112648 132672 153191 2 81 11085304 18432000 1885 130560 0 79202767 99.972 4896433 28067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:47:10] CVMFS is ok
[2025-11-22 19:47:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:47:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:47:10] Further information can be found at the LHC@home message board.
[2025-11-22 19:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:47:10] Checking for apptainer binary...
[2025-11-22 19:47:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:47:10] Running /usr/bin/apptainer --version
[2025-11-22 19:47:10] apptainer version 1.3.2-1.el7
[2025-11-22 19:47:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:47:11] c-206-20.aglt2.org
[2025-11-22 19:47:11] apptainer works
[2025-11-22 19:47:11] Set ATHENA_PROC_NUMBER=8
[2025-11-22 19:47:11] Set ATHENA_CORE_NUMBER=8
[2025-11-22 19:47:11] Starting ATLAS job with PandaID=6892522637
[2025-11-22 19:47:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:12:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:12:24] 2025-11-23 20:11:43,585 | INFO     | monitor loop #4996: job 0:6892522637 is in state 'finished'
[2025-11-23 15:12:24] 2025-11-23 20:11:43,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:12:24] 2025-11-23 20:11:43,639 | INFO     | time since job start (69862s) is within the limit (172800.0s)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,408 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:12:24] 2025-11-23 20:11:45,411 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5416666666665
[2025-11-23 15:12:24] 2025-11-23 20:11:45,414 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6892522637/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,415 | INFO     | extracted standard info from prmon json
[2025-11-23 15:12:24] 2025-11-23 20:11:45,415 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:12:24] 2025-11-23 20:11:45,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:12:24] 2025-11-23 20:11:45,430 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:12:24] 2025-11-23 20:11:45,431 | INFO     | sum of square deviations: 465469879146.61755
[2025-11-23 15:12:24] 2025-11-23 20:11:45,477 | INFO     | sum of deviations: 2197809400773.46
[2025-11-23 15:12:24] 2025-11-23 20:11:45,477 | INFO     | mean x: 1763893760.6436682
[2025-11-23 15:12:24] 2025-11-23 20:11:45,477 | INFO     | mean y: 2863557.04279476
[2025-11-23 15:12:24] 2025-11-23 20:11:45,477 | INFO     | intersect: -8325714644.871724
[2025-11-23 15:12:24] 2025-11-23 20:11:45,479 | INFO     | chi2: 5.21421772481595
[2025-11-23 15:12:24] 2025-11-23 20:11:45,481 | INFO     | sum of square deviations: 459398790094.53595
[2025-11-23 15:12:24] 2025-11-23 20:11:45,510 | INFO     | sum of deviations: 2539456607177.735
[2025-11-23 15:12:24] 2025-11-23 20:11:45,510 | INFO     | mean x: 1763893608.1464913
[2025-11-23 15:12:24] 2025-11-23 20:11:45,511 | INFO     | mean y: 2872136.2350877193
[2025-11-23 15:12:24] 2025-11-23 20:11:45,511 | INFO     | intersect: -9747548139.45701
[2025-11-23 15:12:24] 2025-11-23 20:11:45,512 | INFO     | chi2: 2.6221609362673433
[2025-11-23 15:12:24] 2025-11-23 20:11:45,512 | INFO     | current chi2=2.6221609362673433 (change=49.711326326330195 %)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,513 | INFO     | sum of square deviations: 453380725292.4371
[2025-11-23 15:12:24] 2025-11-23 20:11:45,541 | INFO     | sum of deviations: 2635117180663.2593
[2025-11-23 15:12:24] 2025-11-23 20:11:45,541 | INFO     | mean x: 1763893455.6493392
[2025-11-23 15:12:24] 2025-11-23 20:11:45,541 | INFO     | mean y: 2874558.8775330395
[2025-11-23 15:12:24] 2025-11-23 20:11:45,541 | INFO     | intersect: -10249140338.409933
[2025-11-23 15:12:24] 2025-11-23 20:11:45,543 | INFO     | chi2: 2.3182733221101857
[2025-11-23 15:12:24] 2025-11-23 20:11:45,543 | INFO     | current chi2=2.3182733221101857 (change=11.58920529834995 %)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,543 | INFO     | right removable region: 1134
[2025-11-23 15:12:24] 2025-11-23 20:11:45,545 | INFO     | sum of square deviations: 459398340524.53595
[2025-11-23 15:12:24] 2025-11-23 20:11:45,582 | INFO     | sum of deviations: 1902291643570.1418
[2025-11-23 15:12:24] 2025-11-23 20:11:45,582 | INFO     | mean x: 1763893913.1464913
[2025-11-23 15:12:24] 2025-11-23 20:11:45,582 | INFO     | mean y: 2870971.1728070173
[2025-11-23 15:12:24] 2025-11-23 20:11:45,582 | INFO     | intersect: -7301118519.2803
[2025-11-23 15:12:24] 2025-11-23 20:11:45,583 | INFO     | chi2: 3.1757599644165393
[2025-11-23 15:12:24] 2025-11-23 20:11:45,584 | INFO     | current chi2=3.1757599644165393 (change=39.09422022593741 %)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,585 | INFO     | sum of square deviations: 453380104191.61896
[2025-11-23 15:12:24] 2025-11-23 20:11:45,610 | INFO     | sum of deviations: 1830461282994.9365
[2025-11-23 15:12:24] 2025-11-23 20:11:45,610 | INFO     | mean x: 1763894065.645815
[2025-11-23 15:12:24] 2025-11-23 20:11:45,611 | INFO     | mean y: 2872790.9127753302
[2025-11-23 15:12:24] 2025-11-23 20:11:45,611 | INFO     | intersect: -7118612613.097326
[2025-11-23 15:12:24] 2025-11-23 20:11:45,612 | INFO     | chi2: 3.1306338662757978
[2025-11-23 15:12:24] 2025-11-23 20:11:45,613 | INFO     | current chi2=3.1306338662757978 (change=1.4209543116093866 %)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,613 | INFO     | left removable region: 20
[2025-11-23 15:12:24] 2025-11-23 20:11:45,614 | INFO     | sum of square deviations: 428677656882.6643
[2025-11-23 15:12:24] 2025-11-23 20:11:45,646 | INFO     | time since job start (69864s) is within the limit (172800.0s)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,657 | INFO     | sum of deviations: 2182571729999.9253
[2025-11-23 15:12:24] 2025-11-23 20:11:45,658 | INFO     | mean x: 1763894035.1508079
[2025-11-23 15:12:24] 2025-11-23 20:11:45,658 | INFO     | mean y: 2886602.750448833
[2025-11-23 15:12:24] 2025-11-23 20:11:45,658 | INFO     | intersect: -8977812983.58093
[2025-11-23 15:12:24] 2025-11-23 20:11:45,660 | INFO     | chi2: 0.1931427332482507
[2025-11-23 15:12:24] 2025-11-23 20:11:45,660 | INFO     | current memory leak: 5.09 B/s (using 1114 data points, chi2=0.19)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,661 | INFO     | could have reported an average CPU frequency of 2624 MHz (42 samples)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,661 | INFO     | ..............................
[2025-11-23 15:12:24] 2025-11-23 20:11:45,661 | INFO     | . Timing measurements:
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . get job = 0 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . initial setup = 2 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . payload setup = 5 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . stage-in = 0 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . payload execution = 69825 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,662 | INFO     | . stage-out = 3 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,663 | INFO     | . log creation = 0 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,663 | INFO     | ..............................
[2025-11-23 15:12:24] 2025-11-23 20:11:45,766 | INFO     | 
[2025-11-23 15:12:24] 2025-11-23 20:11:45,766 | INFO     | job summary report
[2025-11-23 15:12:24] 2025-11-23 20:11:45,766 | INFO     | --------------------------------------------------
[2025-11-23 15:12:24] 2025-11-23 20:11:45,766 | INFO     | PanDA job id: 6892522637
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | task id: 47493029
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | errors: (none)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | pilot state: finished 
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | transexitcode: 0
[2025-11-23 15:12:24] 2025-11-23 20:11:45,767 | INFO     | exeerrorcode: 0
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | exeerrordiag: 
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | exitcode: 0
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | exitmsg: OK
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | cpuconsumptiontime: 540558 s
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | nevents: 1000
[2025-11-23 15:12:24] 2025-11-23 20:11:45,768 | INFO     | neventsw: 0
[2025-11-23 15:12:24] 2025-11-23 20:11:45,769 | INFO     | pid: 9247
[2025-11-23 15:12:24] 2025-11-23 20:11:45,769 | INFO     | pgrp: 9247
[2025-11-23 15:12:24] 2025-11-23 20:11:45,769 | INFO     | corecount: 8
[2025-11-23 15:12:24] 2025-11-23 20:11:45,769 | INFO     | event service: False
[2025-11-23 15:12:24] 2025-11-23 20:11:45,769 | INFO     | sizes: {0: 2298621, 1: 2298820, 2: 2298820, 4: 2299110, 12: 2299138, 69834: 2355770, 69838: 2364764, 69841: 2364820, 69848: 2365066}
[2025-11-23 15:12:24] 2025-11-23 20:11:45,770 | INFO     | --------------------------------------------------
[2025-11-23 15:12:24] 2025-11-23 20:11:45,770 | INFO     | 
[2025-11-23 15:12:24] 2025-11-23 20:11:45,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 15:12:24] 2025-11-23 20:11:45,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:12:24] 2025-11-23 20:11:45,789 | INFO     | job 6892522637 has completed (purged errors)
[2025-11-23 15:12:24] 2025-11-23 20:11:45,790 | INFO     | overall cleanup function is called
[2025-11-23 15:12:24] 2025-11-23 20:11:46,807 | INFO     | --- collectZombieJob: --- 10, [9247]
[2025-11-23 15:12:24] 2025-11-23 20:11:46,807 | INFO     | zombie collector waiting for pid 9247
[2025-11-23 15:12:24] 2025-11-23 20:11:46,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:12:24] 2025-11-23 20:11:46,807 | INFO     | collected zombie processes
[2025-11-23 15:12:24] 2025-11-23 20:11:46,807 | INFO     | will attempt to kill all subprocesses of pid=9247
[2025-11-23 15:12:24] 2025-11-23 20:11:46,979 | INFO     | process IDs to be killed: [9247] (in reverse order)
[2025-11-23 15:12:24] 2025-11-23 20:11:47,025 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:12:24] 2025-11-23 20:11:47,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:12:24] 2025-11-23 20:11:47,031 | INFO     | did not find any defunct processes belonging to 9247
[2025-11-23 15:12:24] 2025-11-23 20:11:47,037 | INFO     | did not find any defunct processes belonging to 9247
[2025-11-23 15:12:24] 2025-11-23 20:11:47,039 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:12:24] 2025-11-23 20:11:47,039 | INFO     | ready for new job
[2025-11-23 15:12:24] 2025-11-23 20:11:47,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:12:24] 2025-11-23 20:11:47,044 | INFO     | ***************************************
[2025-11-23 15:12:24] 2025-11-23 20:11:47,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:12:24] 2025-11-23 20:11:47,045 | INFO     | ***************************************
[2025-11-23 15:12:24] 2025-11-23 20:11:47,045 | INFO     | 
[2025-11-23 15:12:24] 2025-11-23 20:11:47,046 | INFO     | architecture information:
[2025-11-23 15:12:24] 2025-11-23 20:11:47,046 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:12:24] 2025-11-23 20:11:47,060 | INFO     | cat /etc/os-release:
[2025-11-23 15:12:24] NAME="CentOS Linux"
[2025-11-23 15:12:24] VERSION="7 (Core)"
[2025-11-23 15:12:24] ID="centos"
[2025-11-23 15:12:24] ID_LIKE="rhel fedora"
[2025-11-23 15:12:24] VERSION_ID="7"
[2025-11-23 15:12:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:12:24] ANSI_COLOR="0;31"
[2025-11-23 15:12:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:12:24] HOME_URL="https://www.centos.org/"
[2025-11-23 15:12:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:12:24] 
[2025-11-23 15:12:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:12:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:12:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:12:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:12:24] 
[2025-11-23 15:12:24] 2025-11-23 20:11:47,061 | INFO     | ***************************************
[2025-11-23 15:12:24] 2025-11-23 20:11:47,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 15:12:24] 2025-11-23 20:11:47,581 | INFO     | sufficient remaining disk space (26368540672 B)
[2025-11-23 15:12:24] 2025-11-23 20:11:47,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:12:24] 2025-11-23 20:11:47,582 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:12:24] 2025-11-23 20:11:47,582 | INFO     | update_server=False
[2025-11-23 15:12:24] 2025-11-23 20:11:47,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:12:24] 2025-11-23 20:11:47,582 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 15:12:24] 2025-11-23 20:11:47,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:12:24] 2025-11-23 20:11:47,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:12:24] 2025-11-23 20:11:47,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:12:24] 2025-11-23 20:11:47,584 | INFO     | aborting loop
[2025-11-23 15:12:24] 2025-11-23 20:11:47,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:12:24] 2025-11-23 20:11:47,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:12:24] 2025-11-23 20:11:48,287 | INFO     | all job control threads have been joined
[2025-11-23 15:12:24] 2025-11-23 20:11:48,464 | INFO     | all data control threads have been joined
[2025-11-23 15:12:24] 2025-11-23 20:11:48,588 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:48,592 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:48,592 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:48,740 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:48,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:12:24] 2025-11-23 20:11:48,776 | INFO     | [job] validate thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:48,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,054 | INFO     | all payload control threads have been joined
[2025-11-23 15:12:24] 2025-11-23 20:11:49,062 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,092 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,103 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,118 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,293 | INFO     | [job] control thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,469 | INFO     | [data] control thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,617 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:49,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:12:24] 2025-11-23 20:11:50,059 | INFO     | [payload] control thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:50,779 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:11:53,829 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:12:24] 2025-11-23 20:12:17,403 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:12:24] 2025-11-23 20:12:19,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187315877696)>', '<ExcThread(monitor, started 140187011094272)>']
[2025-11-23 15:12:24] 2025-11-23 20:12:19,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:12:24] 2025-11-23 20:12:19,753 | INFO     | [monitor] control thread has ended
[2025-11-23 15:12:24] 2025-11-23 20:12:24,339 | INFO     | all workflow threads have been joined
[2025-11-23 15:12:24] 2025-11-23 20:12:24,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:12:24] 2025-11-23 20:12:24,340 | INFO     | traces error code: 0
[2025-11-23 15:12:24] 2025-11-23 20:12:24,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:12:24] 2025-11-23 20:12:24,461 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:12:24] 2025-11-23 20:12:24,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:12:24] 2025-11-23 20:12:24,467 [wrapper] pilotpid: 1648
[2025-11-23 15:12:24] 2025-11-23 20:12:24,469 [wrapper] Pilot exit status: 0
[2025-11-23 15:12:24] 2025-11-23 20:12:24,477 [wrapper] pandaids: 6892522637
[2025-11-23 15:12:24] 2025-11-23 20:12:24,514 [wrapper] cleanup supervisor_pilot  2721 1649
[2025-11-23 15:12:24] 2025-11-23 20:12:24,517 [wrapper] Test setup, not cleaning
[2025-11-23 15:12:24] 2025-11-23 20:12:24,519 [wrapper] apfmon messages muted
[2025-11-23 15:12:24] 2025-11-23 20:12:24,522 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:12:24] 2025-11-23 20:12:24,524 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:12:24]  *** Error codes and diagnostics ***
[2025-11-23 15:12:24]     "exeErrorCode": 0,
[2025-11-23 15:12:24]     "exeErrorDiag": "",
[2025-11-23 15:12:24]     "pilotErrorCode": 0,
[2025-11-23 15:12:24]     "pilotErrorDiag": "",
[2025-11-23 15:12:24]  *** Listing of results directory ***
[2025-11-23 15:12:24] total 1323336
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:04 queuedata.json
[2025-11-23 15:12:24] -rwx------ 1 boincer umatlas     36292 Nov 19 02:05 runpilot2-wrapper.sh
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas       100 Nov 22 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:12:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 19:47 run_atlas
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas       105 Nov 22 19:47 job.xml
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas 410982599 Nov 22 19:47 EVNT.47493027._000048.pool.root.1
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas     15120 Nov 22 19:47 start_atlas.sh
[2025-11-23 15:12:24] drwxrwx--x 2 boincer umatlas      4096 Nov 22 19:47 shared
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 19:47 input.tar.gz
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas         0 Nov 22 19:47 boinc_lockfile
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas      2771 Nov 22 19:47 pandaJob.out
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas    989784 Nov 22 19:47 agis_schedconf.cvmfs.json
[2025-11-23 15:12:24] drwx------ 5 boincer umatlas      4096 Nov 22 19:47 pilot3
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas       533 Nov 23 14:58 boinc_task_state.xml
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas 916273610 Nov 23 15:10 HITS.47493029._000435.pool.root.1
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 15:11 init_data.xml
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas        95 Nov 23 15:11 pilot_heartbeat.json
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas      1068 Nov 23 15:11 memory_monitor_summary.json
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas   1526164 Nov 23 15:11 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas   2304705 Nov 23 15:11 log.47493029._000435.job.log.tgz.1
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas      8658 Nov 23 15:11 heartbeat.json
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:12 boinc_mmap_file
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:12 wrapper_checkpoint.txt
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas      4552 Nov 23 15:12 pilotlog.txt
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas   9652774 Nov 23 15:12 log.47493029._000435.job.log.1
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas       353 Nov 23 15:12 output.list
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:12 runtime_log
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas  11980800 Nov 23 15:12 result.tar.gz
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas      8704 Nov 23 15:12 runtime_log.err
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas       668 Nov 23 15:12 EnkLDm7Qrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUqFKDmI1jBHo.diag
[2025-11-23 15:12:24] -rw-r--r-- 1 boincer umatlas     21258 Nov 23 15:12 stderr.txt
[2025-11-23 15:12:24] HITS file was successfully produced:
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas 916273610 Nov 23 15:10 shared/HITS.pool.root.1
[2025-11-23 15:12:24]  *** Contents of shared directory: ***
[2025-11-23 15:12:24] total 1308456
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas 410982599 Nov 22 19:47 ATLAS.root_0
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas     15120 Nov 22 19:47 start_atlas.sh
[2025-11-23 15:12:24] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 19:47 input.tar.gz
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas 916273610 Nov 23 15:10 HITS.pool.root.1
[2025-11-23 15:12:24] -rw------- 1 boincer umatlas  11980800 Nov 23 15:12 result.tar.gz
15:12:26 (30349): run_atlas exited; CPU time 539432.957625
15:12:26 (30349): called boinc_finish(0)

</stderr_txt>
]]>

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