Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:39:34 (8532): wrapper (7.7.26015): starting
04:39:34 (8532): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 04:39:34] Arguments: --nthreads 8
[2025-11-23 04:39:34] Threads: 8
[2025-11-23 04:39:34] Checking for CVMFS
[2025-11-23 04:39:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 04:39:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 04:39:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 04:39:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 04:39:34] 2.11.0.0 4422 60484 108048 153195 0 1 2829597 4096000 0 130560 1 5184655 99.695 3565258 451 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-23 04:39:34] CVMFS is ok
[2025-11-23 04:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 04:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 04:39:34] Further information can be found at the LHC@home message board.
[2025-11-23 04:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 04:39:34] Checking for apptainer binary...
[2025-11-23 04:39:34] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-23 04:39:34] apptainer is not installed, using version from CVMFS
[2025-11-23 04:39:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 04:40:00] WARNING: Environment variable TMPDIR already has value [/tmp/job_10916105/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node145
[2025-11-23 04:40:00] apptainer works
[2025-11-23 04:40:00] Set ATHENA_PROC_NUMBER=8
[2025-11-23 04:40:00] Set ATHENA_CORE_NUMBER=8
[2025-11-23 04:40:00] Starting ATLAS job with PandaID=6886163427
[2025-11-23 04:40:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10916105/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:38:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:38:06] 2025-11-23 06:37:25,025 | INFO     | monitor loop #788: job 0:6886163427 is in state 'finished'
[2025-11-23 07:38:06] 2025-11-23 06:37:25,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,000 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 07:38:06] 2025-11-23 06:37:26,005 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 3184.4569843749996
[2025-11-23 07:38:06] 2025-11-23 06:37:26,010 | INFO     | using path: /tmp/job_10916105/atlas/pilot/slots/0/PanDA_Pilot-6886163427/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,010 | INFO     | extracted standard info from prmon json
[2025-11-23 07:38:06] 2025-11-23 06:37:26,010 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:38:06] 2025-11-23 06:37:26,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:38:06] 2025-11-23 06:37:26,012 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:38:06] 2025-11-23 06:37:26,012 | INFO     | sum of square deviations: 1605470102.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | sum of deviations: 809250704451.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | mean x: 1763874538.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | mean y: 5260378.50867052
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | intersect: -889090531976.3229
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | chi2: 5.060299085000026
[2025-11-23 07:38:06] 2025-11-23 06:37:26,013 | INFO     | sum of square deviations: 1470248962.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | sum of deviations: 818948008040.9999
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | mean x: 1763874385.5
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | mean y: 5269935.035714285
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | intersect: -982495960655.7107
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | chi2: 3.7219792649523793
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | current chi2=3.7219792649523793 (change=26.447445053490153 %)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,014 | INFO     | sum of square deviations: 1342841922.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | sum of deviations: 750229372492.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | mean x: 1763874233.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | mean y: 5187694.466257669
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | intersect: -985449792000.752
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | chi2: 3.727692595461555
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | current chi2=3.727692595461555 (change=-0.1535024808701819 %)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | right removable region: 162
[2025-11-23 07:38:06] 2025-11-23 06:37:26,015 | INFO     | sum of square deviations: 1470248962.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | sum of deviations: 684963096450.4999
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | mean x: 1763874690.5
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | mean y: 5400408.660714285
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | intersect: -821752751429.808
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | chi2: 1.713557240968266
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | current chi2=1.713557240968266 (change=66.13723394240328 %)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,016 | INFO     | sum of square deviations: 1342841922.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | sum of deviations: 619824696539.0005
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | mean x: 1763874843.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | mean y: 5478160.8036809815
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | intersect: -814158252791.9243
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | chi2: 1.5557799946717314
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | current chi2=1.5557799946717314 (change=9.207585397461287 %)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | left removable region: 20
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | sum of square deviations: 887813855.5
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | sum of deviations: 470676480070.0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | mean x: 1763874812.5
[2025-11-23 07:38:06] 2025-11-23 06:37:26,017 | INFO     | mean y: 5541070.281690141
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | intersect: -935116593922.8359
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | chi2: 0.02863714835980612
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | current memory leak: 530.15 B/s (using 142 data points, chi2=0.03)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | could have reported an average CPU frequency of 2953 MHz (9 samples)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | ..............................
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . Timing measurements:
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . get job = 0 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . initial setup = 3 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . payload setup = 32 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . stage-in = 0 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . payload execution = 10548 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . stage-out = 0 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | . log creation = 0 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,018 | INFO     | ..............................
[2025-11-23 07:38:06] 2025-11-23 06:37:26,067 | INFO     | 
[2025-11-23 07:38:06] 2025-11-23 06:37:26,067 | INFO     | job summary report
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | --------------------------------------------------
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | PanDA job id: 6886163427
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | task id: 47450870
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | errors: (none)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | pilot state: finished 
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | transexitcode: 0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | exeerrorcode: 0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | exeerrordiag: 
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | exitcode: 0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | exitmsg: OK
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | cpuconsumptiontime: 77523 s
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | nevents: 1000
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | neventsw: 0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | pid: 23008
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | pgrp: 23008
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | corecount: 8
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | event service: False
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | sizes: {0: 2299118, 2: 2299380, 11: 2299408, 10583: 2348461, 10584: 2348460, 10585: 2357540, 10587: 2357724, 10589: 2358034}
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | --------------------------------------------------
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | 
[2025-11-23 07:38:06] 2025-11-23 06:37:26,068 | INFO     | executing command: ls -lF /tmp/job_10916105/atlas/pilot/slots/0
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | job 6886163427 has completed (purged errors)
[2025-11-23 07:38:06] 2025-11-23 06:37:26,078 | INFO     | overall cleanup function is called
[2025-11-23 07:38:06] 2025-11-23 06:37:27,085 | INFO     | --- collectZombieJob: --- 10, [23008]
[2025-11-23 07:38:06] 2025-11-23 06:37:27,085 | INFO     | zombie collector waiting for pid 23008
[2025-11-23 07:38:06] 2025-11-23 06:37:27,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:38:06] 2025-11-23 06:37:27,086 | INFO     | collected zombie processes
[2025-11-23 07:38:06] 2025-11-23 06:37:27,086 | INFO     | will attempt to kill all subprocesses of pid=23008
[2025-11-23 07:38:06] 2025-11-23 06:37:27,206 | INFO     | process IDs to be killed: [23008] (in reverse order)
[2025-11-23 07:38:06] 2025-11-23 06:37:27,251 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:38:06] 2025-11-23 06:37:27,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:38:06] 2025-11-23 06:37:27,256 | INFO     | did not find any defunct processes belonging to 23008
[2025-11-23 07:38:06] 2025-11-23 06:37:27,259 | INFO     | did not find any defunct processes belonging to 23008
[2025-11-23 07:38:06] 2025-11-23 06:37:27,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:38:06] 2025-11-23 06:37:27,260 | INFO     | ready for new job
[2025-11-23 07:38:06] 2025-11-23 06:37:27,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:38:06] 2025-11-23 06:37:27,260 | INFO     | ***************************************
[2025-11-23 07:38:06] 2025-11-23 06:37:27,261 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:38:06] 2025-11-23 06:37:27,261 | INFO     | ***************************************
[2025-11-23 07:38:06] 2025-11-23 06:37:27,261 | INFO     | 
[2025-11-23 07:38:06] 2025-11-23 06:37:27,275 | INFO     | architecture information:
[2025-11-23 07:38:06] 2025-11-23 06:37:27,276 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:38:06] 2025-11-23 06:37:27,282 | INFO     | cat /etc/os-release:
[2025-11-23 07:38:06] NAME="CentOS Linux"
[2025-11-23 07:38:06] VERSION="7 (Core)"
[2025-11-23 07:38:06] ID="centos"
[2025-11-23 07:38:06] ID_LIKE="rhel fedora"
[2025-11-23 07:38:06] VERSION_ID="7"
[2025-11-23 07:38:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:38:06] ANSI_COLOR="0;31"
[2025-11-23 07:38:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:38:06] HOME_URL="https://www.centos.org/"
[2025-11-23 07:38:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:38:06] 
[2025-11-23 07:38:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:38:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:38:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:38:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:38:06] 
[2025-11-23 07:38:06] 2025-11-23 06:37:27,282 | INFO     | ***************************************
[2025-11-23 07:38:06] 2025-11-23 06:37:27,785 | INFO     | executing command: df -mP /tmp/job_10916105/atlas/pilot/slots/0
[2025-11-23 07:38:06] 2025-11-23 06:37:27,791 | INFO     | sufficient remaining disk space (217437962240 B)
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | INFO     | update_server=False
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:38:06] 2025-11-23 06:37:27,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:38:06] 2025-11-23 06:37:27,798 | INFO     | all payload control threads have been joined
[2025-11-23 07:38:06] 2025-11-23 06:37:27,898 | INFO     | all job control threads have been joined
[2025-11-23 07:38:06] 2025-11-23 06:37:28,068 | INFO     | all data control threads have been joined
[2025-11-23 07:38:06] 2025-11-23 06:37:28,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:38:06] 2025-11-23 06:37:28,538 | INFO     | aborting loop
[2025-11-23 07:38:06] 2025-11-23 06:37:28,796 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:28,797 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:28,803 | INFO     | [payload] control thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:28,903 | INFO     | [job] control thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,073 | INFO     | [data] control thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,113 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,187 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,526 | INFO     | [job] validate thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,538 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,543 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,746 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,792 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,797 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:29,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:30,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:38:06] 2025-11-23 06:37:34,296 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:38,621 | INFO     | job.realtimelogging is not enabled
[2025-11-23 07:38:06] 2025-11-23 06:37:39,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:38:06] 2025-11-23 06:37:58,177 | INFO     | PID=13824 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 07:38:06] 2025-11-23 06:37:58,177 | INFO     | .. there are 8 such processes running
[2025-11-23 07:38:06] 2025-11-23 06:37:58,178 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:38:06] 2025-11-23 06:37:58,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:38:06] 2025-11-23 06:37:58,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:38:06] 2025-11-23 06:38:00,814 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:38:06] 2025-11-23 06:38:01,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060802816)>']
[2025-11-23 07:38:06] 2025-11-23 06:38:02,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:38:06] 2025-11-23 06:38:02,198 | INFO     | [monitor] control thread has ended
[2025-11-23 07:38:06] 2025-11-23 06:38:06,301 | INFO     | all workflow threads have been joined
[2025-11-23 07:38:06] 2025-11-23 06:38:06,301 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:38:06] 2025-11-23 06:38:06,301 | INFO     | traces error code: 0
[2025-11-23 07:38:06] 2025-11-23 06:38:06,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:38:06] 2025-11-23 06:38:06,351 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:38:06] 2025-11-23 06:38:06,352 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:38:06] 2025-11-23 06:38:06,354 [wrapper] pilotpid: 13824
[2025-11-23 07:38:06] 2025-11-23 06:38:06,355 [wrapper] Pilot exit status: 0
[2025-11-23 07:38:06] 2025-11-23 06:38:06,359 [wrapper] pandaids: 6886163427
[2025-11-23 07:38:06] 2025-11-23 06:38:06,386 [wrapper] cleanup supervisor_pilot  7969 13825
[2025-11-23 07:38:06] 2025-11-23 06:38:06,387 [wrapper] Test setup, not cleaning
[2025-11-23 07:38:06] 2025-11-23 06:38:06,388 [wrapper] apfmon messages muted
[2025-11-23 07:38:06] 2025-11-23 06:38:06,389 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:38:06] 2025-11-23 06:38:06,389 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:38:06]  *** Error codes and diagnostics ***
[2025-11-23 07:38:06]     "exeErrorCode": 0,
[2025-11-23 07:38:06]     "exeErrorDiag": "",
[2025-11-23 07:38:06]     "pilotErrorCode": 0,
[2025-11-23 07:38:06]     "pilotErrorDiag": "",
[2025-11-23 07:38:06]  *** Listing of results directory ***
[2025-11-23 07:38:06] total 952944
[2025-11-23 07:38:06] -rwx------ 1 mf493845 unix-user     36292 Nov 14 15:24 runpilot2-wrapper.sh
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      5112 Nov 14 15:24 queuedata.json
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user    576529 Nov 14 15:24 pilot3.tar.gz
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user       100 Nov 23 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:38:06] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 23 03:01 run_atlas
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user       105 Nov 23 03:01 job.xml
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user     15120 Nov 23 04:39 start_atlas.sh
[2025-11-23 07:38:06] drwxrwx--x 2 mf493845 unix-user       100 Nov 23 04:39 shared
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user    590121 Nov 23 04:39 input.tar.gz
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      6394 Nov 23 04:39 init_data.xml
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user 383299033 Nov 23 04:39 EVNT.14545720._000033.pool.root.1
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user         0 Nov 23 04:39 boinc_setup_complete
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      8192 Nov 23 04:39 boinc_mmap_file
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user         0 Nov 23 04:39 boinc_lockfile
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      2919 Nov 23 04:40 pandaJob.out
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user    989784 Nov 23 04:40 agis_schedconf.cvmfs.json
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user   1526164 Nov 23 04:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:38:06] drwx------ 5 mf493845 unix-user       440 Nov 23 04:40 pilot3
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user 582358103 Nov 23 07:37 HITS.47450870._000318.pool.root.1
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      1024 Nov 23 07:37 memory_monitor_summary.json
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user        95 Nov 23 07:37 pilot_heartbeat.json
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user   1562237 Nov 23 07:37 log.47450870._000318.job.log.tgz.1
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user     28016 Nov 23 07:37 heartbeat.json
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      4907 Nov 23 07:38 pilotlog.txt
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user   1551526 Nov 23 07:38 log.47450870._000318.job.log.1
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user       353 Nov 23 07:38 output.list
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user       620 Nov 23 07:38 runtime_log
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user   3153920 Nov 23 07:38 result.tar.gz
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user      9077 Nov 23 07:38 runtime_log.err
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user       650 Nov 23 07:38 F7lMDmpt9d8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEdJODmarUFgm.diag
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user     21682 Nov 23 07:38 stderr.txt
[2025-11-23 07:38:06] HITS file was successfully produced:
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user 582358103 Nov 23 07:37 shared/HITS.pool.root.1
[2025-11-23 07:38:06]  *** Contents of shared directory: ***
[2025-11-23 07:38:06] total 946704
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user     15120 Nov 23 04:39 start_atlas.sh
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user    590121 Nov 23 04:39 input.tar.gz
[2025-11-23 07:38:06] -rw-r--r-- 2 mf493845 unix-user 383299033 Nov 23 04:39 ATLAS.root_0
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user 582358103 Nov 23 07:37 HITS.pool.root.1
[2025-11-23 07:38:06] -rw------- 1 mf493845 unix-user   3153920 Nov 23 07:38 result.tar.gz
07:38:08 (8532): run_atlas exited; CPU time 77651.504525
07:38:08 (8532): called boinc_finish(0)

</stderr_txt>
]]>

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