Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:43:12 (1517615): wrapper (7.7.26015): starting
04:43:12 (1517615): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 04:43:12] Arguments: --nthreads 2
[2025-11-27 04:43:12] Threads: 2
[2025-11-27 04:43:12] Checking for CVMFS
[2025-11-27 04:43:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:43:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:43:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:43:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:43:12] 2.9.2.0 87922 12208 64476 153345 1 68 31338138 36864000 0 130560 0 3944226 99.816 923851 2778 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 04:43:12] CVMFS is ok
[2025-11-27 04:43:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:43:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:43:12] Further information can be found at the LHC@home message board.
[2025-11-27 04:43:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:43:12] Checking for apptainer binary...
[2025-11-27 04:43:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:43:12] Running /usr/bin/apptainer --version
[2025-11-27 04:43:12] apptainer version 1.4.1-1.1
[2025-11-27 04:43:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:43:13] thA354
[2025-11-27 04:43:13] apptainer works
[2025-11-27 04:43:13] Set ATHENA_PROC_NUMBER=2
[2025-11-27 04:43:13] Set ATHENA_CORE_NUMBER=2
[2025-11-27 04:43:13] Starting ATLAS job with PandaID=6895334072
[2025-11-27 04:43:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:05:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:05:34] 2025-11-27 16:04:42,201 | INFO     | time since job start (44476s) is within the limit (172800.0s)
[2025-11-27 17:05:34] 2025-11-27 16:04:43,083 | INFO     | monitor loop #3391: job 0:6895334072 is in state 'finished'
[2025-11-27 17:05:34] 2025-11-27 16:04:43,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,207 | INFO     | time since job start (44478s) is within the limit (172800.0s)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,512 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 17:05:34] 2025-11-27 16:04:44,513 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3140.67925
[2025-11-27 17:05:34] 2025-11-27 16:04:44,514 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895334072/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,514 | INFO     | extracted standard info from prmon json
[2025-11-27 17:05:34] 2025-11-27 16:04:44,514 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:05:34] 2025-11-27 16:04:44,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:05:34] 2025-11-27 16:04:44,519 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:05:34] 2025-11-27 16:04:44,519 | INFO     | sum of square deviations: 120132410580.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,525 | INFO     | sum of deviations: 248479108853.99988
[2025-11-27 17:05:34] 2025-11-27 16:04:44,525 | INFO     | mean x: 1764237239.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,525 | INFO     | mean y: 2021983.0301783264
[2025-11-27 17:05:34] 2025-11-27 16:04:44,525 | INFO     | intersect: -3647085654.428179
[2025-11-27 17:05:34] 2025-11-27 16:04:44,526 | INFO     | chi2: 3.7489293248453106
[2025-11-27 17:05:34] 2025-11-27 16:04:44,526 | INFO     | sum of square deviations: 117677462225.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,532 | INFO     | sum of deviations: 340826555715.50006
[2025-11-27 17:05:34] 2025-11-27 16:04:44,532 | INFO     | mean x: 1764237086.5
[2025-11-27 17:05:34] 2025-11-27 16:04:44,532 | INFO     | mean y: 2027706.9433701658
[2025-11-27 17:05:34] 2025-11-27 16:04:44,532 | INFO     | intersect: -5107692015.832915
[2025-11-27 17:05:34] 2025-11-27 16:04:44,533 | INFO     | chi2: 2.3300767006972345
[2025-11-27 17:05:34] 2025-11-27 16:04:44,533 | INFO     | current chi2=2.3300767006972345 (change=37.84687576649958 %)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,533 | INFO     | sum of square deviations: 115256188920.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,539 | INFO     | sum of deviations: 338490386102.99994
[2025-11-27 17:05:34] 2025-11-27 16:04:44,539 | INFO     | mean x: 1764236934.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,539 | INFO     | mean y: 2027559.759388039
[2025-11-27 17:05:34] 2025-11-27 16:04:44,539 | INFO     | intersect: -5179275471.01614
[2025-11-27 17:05:34] 2025-11-27 16:04:44,539 | INFO     | chi2: 2.329083447288378
[2025-11-27 17:05:34] 2025-11-27 16:04:44,540 | INFO     | current chi2=2.329083447288378 (change=0.04262749842351333 %)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,540 | INFO     | right removable region: 718
[2025-11-27 17:05:34] 2025-11-27 16:04:44,540 | INFO     | sum of square deviations: 117677462225.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,546 | INFO     | sum of deviations: 113289382451.0001
[2025-11-27 17:05:34] 2025-11-27 16:04:44,546 | INFO     | mean x: 1764237391.5
[2025-11-27 17:05:34] 2025-11-27 16:04:44,546 | INFO     | mean y: 2030371.9613259668
[2025-11-27 17:05:34] 2025-11-27 16:04:44,546 | INFO     | intersect: -1696420298.2090325
[2025-11-27 17:05:34] 2025-11-27 16:04:44,547 | INFO     | chi2: 1.751687898421478
[2025-11-27 17:05:34] 2025-11-27 16:04:44,547 | INFO     | current chi2=1.751687898421478 (change=53.27498209121996 %)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,547 | INFO     | sum of square deviations: 115256188920.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | sum of deviations: 76311122183.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | mean x: 1764237544.0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | mean y: 2032692.719054242
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | intersect: -1166068977.4955316
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | chi2: 1.4922729677863886
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | current chi2=1.4922729677863886 (change=14.809426432006495 %)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | left removable region: 20
[2025-11-27 17:05:34] 2025-11-27 16:04:44,553 | INFO     | sum of square deviations: 105449324114.5
[2025-11-27 17:05:34] 2025-11-27 16:04:44,557 | INFO     | sum of deviations: 156978102475.99988
[2025-11-27 17:05:34] 2025-11-27 16:04:44,557 | INFO     | mean x: 1764237513.5
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | mean y: 2039140.9598853868
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | intersect: -2624309197.5604196
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | chi2: 0.06245913211336153
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | current memory leak: 1.49 B/s (using 698 data points, chi2=0.06)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | could have reported an average CPU frequency of 4535 MHz (28 samples)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | ..............................
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . Timing measurements:
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . get job = 0 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . initial setup = 1 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . payload setup = 7 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . stage-in = 0 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . payload execution = 44438 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . stage-out = 1 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | . log creation = 0 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,558 | INFO     | ..............................
[2025-11-27 17:05:34] 2025-11-27 16:04:44,619 | INFO     | 
[2025-11-27 17:05:34] 2025-11-27 16:04:44,619 | INFO     | job summary report
[2025-11-27 17:05:34] 2025-11-27 16:04:44,619 | INFO     | --------------------------------------------------
[2025-11-27 17:05:34] 2025-11-27 16:04:44,619 | INFO     | PanDA job id: 6895334072
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | task id: 47556137
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | errors: (none)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | pilot state: finished 
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | transexitcode: 0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | exeerrorcode: 0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | exeerrordiag: 
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | exitcode: 0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | exitmsg: OK
[2025-11-27 17:05:34] 2025-11-27 16:04:44,620 | INFO     | cpuconsumptiontime: 87983 s
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | nevents: 1000
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | neventsw: 0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | pid: 1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | pgrp: 1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | corecount: 2
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | event service: False
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | sizes: {0: 2284267, 7: 2284529, 11: 2284557, 44449: 2330622, 44451: 2339622, 44453: 2339678, 44460: 2340052}
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | --------------------------------------------------
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | 
[2025-11-27 17:05:34] 2025-11-27 16:04:44,621 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:05:34] 2025-11-27 16:04:44,635 | INFO     | job 6895334072 has completed (purged errors)
[2025-11-27 17:05:34] 2025-11-27 16:04:44,635 | INFO     | overall cleanup function is called
[2025-11-27 17:05:34] 2025-11-27 16:04:45,642 | INFO     | --- collectZombieJob: --- 10, [1527747]
[2025-11-27 17:05:34] 2025-11-27 16:04:45,642 | INFO     | zombie collector waiting for pid 1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:45,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:05:34] 2025-11-27 16:04:45,643 | INFO     | collected zombie processes
[2025-11-27 17:05:34] 2025-11-27 16:04:45,643 | INFO     | will attempt to kill all subprocesses of pid=1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:45,698 | INFO     | process IDs to be killed: [1527747] (in reverse order)
[2025-11-27 17:05:34] 2025-11-27 16:04:45,719 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:05:34] 2025-11-27 16:04:45,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:05:34] 2025-11-27 16:04:45,719 | INFO     | did not find any defunct processes belonging to 1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:45,720 | INFO     | did not find any defunct processes belonging to 1527747
[2025-11-27 17:05:34] 2025-11-27 16:04:45,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:05:34] 2025-11-27 16:04:45,721 | INFO     | ready for new job
[2025-11-27 17:05:34] 2025-11-27 16:04:45,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | ***************************************
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | ***************************************
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | 
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | architecture information:
[2025-11-27 17:05:34] 2025-11-27 16:04:45,722 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:05:34] 2025-11-27 16:04:45,728 | INFO     | cat /etc/os-release:
[2025-11-27 17:05:34] NAME="CentOS Linux"
[2025-11-27 17:05:34] VERSION="7 (Core)"
[2025-11-27 17:05:34] ID="centos"
[2025-11-27 17:05:34] ID_LIKE="rhel fedora"
[2025-11-27 17:05:34] VERSION_ID="7"
[2025-11-27 17:05:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:05:34] ANSI_COLOR="0;31"
[2025-11-27 17:05:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:05:34] HOME_URL="https://www.centos.org/"
[2025-11-27 17:05:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:05:34] 
[2025-11-27 17:05:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:05:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:05:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:05:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:05:34] 
[2025-11-27 17:05:34] 2025-11-27 16:04:45,729 | INFO     | ***************************************
[2025-11-27 17:05:34] 2025-11-27 16:04:46,232 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 17:05:34] 2025-11-27 16:04:46,262 | INFO     | sufficient remaining disk space (488762245120 B)
[2025-11-27 17:05:34] 2025-11-27 16:04:46,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:05:34] 2025-11-27 16:04:46,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:05:34] 2025-11-27 16:04:46,263 | INFO     | update_server=False
[2025-11-27 17:05:34] 2025-11-27 16:04:46,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:05:34] 2025-11-27 16:04:46,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:05:34] 2025-11-27 16:04:46,550 | INFO     | all data control threads have been joined
[2025-11-27 17:05:34] 2025-11-27 16:04:46,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:05:34] 2025-11-27 16:04:46,593 | INFO     | aborting loop
[2025-11-27 17:05:34] 2025-11-27 16:04:46,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:05:34] 2025-11-27 16:04:47,187 | INFO     | all job control threads have been joined
[2025-11-27 17:05:34] 2025-11-27 16:04:47,263 | INFO     | all payload control threads have been joined
[2025-11-27 17:05:34] 2025-11-27 16:04:47,269 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,270 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,373 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,519 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,556 | INFO     | [data] control thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,599 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,654 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:47,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:05:34] 2025-11-27 16:04:48,167 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,174 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,193 | INFO     | [job] control thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,269 | INFO     | [payload] control thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,282 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,551 | INFO     | [job] validate thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:48,636 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:04:51,990 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:05:34] 2025-11-27 16:05:17,322 | INFO     | PID=1521328 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:05:34] 2025-11-27 16:05:17,322 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:05:34] 2025-11-27 16:05:17,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:05:34] 2025-11-27 16:05:17,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:05:34] 2025-11-27 16:05:27,332 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:05:34] 2025-11-27 16:05:29,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842652579648)>', '<ExcThread(monitor, started 139842138642176)>']
[2025-11-27 17:05:34] 2025-11-27 16:05:29,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:05:34] 2025-11-27 16:05:29,387 | INFO     | [monitor] control thread has ended
[2025-11-27 17:05:34] 2025-11-27 16:05:34,276 | INFO     | all workflow threads have been joined
[2025-11-27 17:05:34] 2025-11-27 16:05:34,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:05:34] 2025-11-27 16:05:34,277 | INFO     | traces error code: 0
[2025-11-27 17:05:34] 2025-11-27 16:05:34,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:05:34] 2025-11-27 16:05:34,319 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:05:34] 2025-11-27 16:05:34,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:05:34] 2025-11-27 16:05:34,324 [wrapper] pilotpid: 1521328
[2025-11-27 17:05:34] 2025-11-27 16:05:34,327 [wrapper] Pilot exit status: 0
[2025-11-27 17:05:34] 2025-11-27 16:05:34,332 [wrapper] pandaids: 6895334072
[2025-11-27 17:05:34] 2025-11-27 16:05:34,344 [wrapper] cleanup supervisor_pilot 1599664 1521329
[2025-11-27 17:05:34] 2025-11-27 16:05:34,346 [wrapper] Test setup, not cleaning
[2025-11-27 17:05:34] 2025-11-27 16:05:34,348 [wrapper] apfmon messages muted
[2025-11-27 17:05:34] 2025-11-27 16:05:34,350 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:05:34] 2025-11-27 16:05:34,352 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:05:34]  *** Error codes and diagnostics ***
[2025-11-27 17:05:34]     "exeErrorCode": 0,
[2025-11-27 17:05:34]     "exeErrorDiag": "",
[2025-11-27 17:05:34]     "pilotErrorCode": 0,
[2025-11-27 17:05:34]     "pilotErrorDiag": "",
[2025-11-27 17:05:34]  *** Listing of results directory ***
[2025-11-27 17:05:34] total 1320448
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc      5112 Nov 22 03:32 queuedata.json
[2025-11-27 17:05:34] -rwx------ 1 boinc boinc     36292 Nov 22 03:36 runpilot2-wrapper.sh
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc    576529 Nov 22 03:36 pilot3.tar.gz
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:05:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:43 run_atlas
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:43 job.xml
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc 409311484 Nov 27 04:43 EVNT.47483658._000224.pool.root.1
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc    590088 Nov 27 04:43 input.tar.gz
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:43 start_atlas.sh
[2025-11-27 17:05:34] drwxrwx--x 2 boinc boinc      4096 Nov 27 04:43 shared
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:43 boinc_setup_complete
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc      6207 Nov 27 04:43 init_data.xml
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:43 boinc_lockfile
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc      2785 Nov 27 04:43 pandaJob.out
[2025-11-27 17:05:34] -rw------- 1 boinc boinc    991546 Nov 27 04:43 agis_schedconf.cvmfs.json
[2025-11-27 17:05:34] drwx------ 5 boinc boinc      4096 Nov 27 04:43 pilot3
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc       532 Nov 27 17:00 boinc_task_state.xml
[2025-11-27 17:05:34] -rw------- 1 boinc boinc 923994802 Nov 27 17:04 HITS.47556137._002202.pool.root.1
[2025-11-27 17:05:34] -rw------- 1 boinc boinc      1021 Nov 27 17:04 memory_monitor_summary.json
[2025-11-27 17:05:34] -rw------- 1 boinc boinc   1516240 Nov 27 17:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:05:34] -rw------- 1 boinc boinc   1216862 Nov 27 17:04 log.47556137._002202.job.log.tgz.1
[2025-11-27 17:05:34] -rw------- 1 boinc boinc      8560 Nov 27 17:04 heartbeat.json
[2025-11-27 17:05:34] -rw------- 1 boinc boinc        95 Nov 27 17:05 pilot_heartbeat.json
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:05 boinc_mmap_file
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc        28 Nov 27 17:05 wrapper_checkpoint.txt
[2025-11-27 17:05:34] -rw------- 1 boinc boinc      4752 Nov 27 17:05 pilotlog.txt
[2025-11-27 17:05:34] -rw------- 1 boinc boinc   6240360 Nov 27 17:05 log.47556137._002202.job.log.1
[2025-11-27 17:05:34] -rw------- 1 boinc boinc       353 Nov 27 17:05 output.list
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:05 runtime_log
[2025-11-27 17:05:34] -rw------- 1 boinc boinc   7475200 Nov 27 17:05 result.tar.gz
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc      8898 Nov 27 17:05 runtime_log.err
[2025-11-27 17:05:34] -rw------- 1 boinc boinc       665 Nov 27 17:05 bHqLDmFfsg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0sJKDm12nW9m.diag
[2025-11-27 17:05:34] -rw-r--r-- 1 boinc boinc     21262 Nov 27 17:05 stderr.txt
[2025-11-27 17:05:34] HITS file was successfully produced:
[2025-11-27 17:05:34] -rw------- 1 boinc boinc 923994802 Nov 27 17:04 shared/HITS.pool.root.1
[2025-11-27 17:05:34]  *** Contents of shared directory: ***
[2025-11-27 17:05:34] total 1309964
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc 409311484 Nov 27 04:43 ATLAS.root_0
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc    590088 Nov 27 04:43 input.tar.gz
[2025-11-27 17:05:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:43 start_atlas.sh
[2025-11-27 17:05:34] -rw------- 1 boinc boinc 923994802 Nov 27 17:04 HITS.pool.root.1
[2025-11-27 17:05:34] -rw------- 1 boinc boinc   7475200 Nov 27 17:05 result.tar.gz
17:05:35 (1517615): run_atlas exited; CPU time 88118.440199
17:05:35 (1517615): called boinc_finish(0)

</stderr_txt>
]]>

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