Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:52:05 (869785): wrapper (7.7.26015): starting
19:52:05 (869785): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 19:52:05] Arguments: --nthreads 9
[2025-11-22 19:52:05] Threads: 9
[2025-11-22 19:52:05] Checking for CVMFS
[2025-11-22 19:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:52:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:52:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:52:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:52:06] 2.13.2.0 40083 27798 222928 153191 2 355 28921472 39288833 7168 16776704 0 17866057 99.752 13214667 37507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:52:06] CVMFS is ok
[2025-11-22 19:52:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:52:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:52:06] Further information can be found at the LHC@home message board.
[2025-11-22 19:52:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:52:06] Checking for apptainer binary...
[2025-11-22 19:52:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:52:06] Running /usr/bin/apptainer --version
[2025-11-22 19:52:06] apptainer version 1.4.4-1.el9
[2025-11-22 19:52:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:52:07] c-211-19.aglt2.org
[2025-11-22 19:52:07] apptainer works
[2025-11-22 19:52:07] Set ATHENA_PROC_NUMBER=9
[2025-11-22 19:52:07] Set ATHENA_CORE_NUMBER=9
[2025-11-22 19:52:07] Starting ATLAS job with PandaID=6895334127
[2025-11-22 19:52:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:33:56]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:33:57] 2025-11-25 00:11:50,088 | INFO     | time since job start (170370s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:11:50,699 | INFO     | monitor loop #9627: job 0:6895334127 is in state 'finished'
[2025-11-24 19:33:57] 2025-11-25 00:11:50,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:33:57] 2025-11-25 00:11:52,093 | INFO     | time since job start (170372s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:11:53,204 | INFO     | monitor loop #9628: job 0:6895334127 is in state 'finished'
[2025-11-24 19:33:57] 2025-11-25 00:11:53,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:33:57] 2025-11-25 00:11:54,100 | INFO     | time since job start (170374s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:11:55,710 | INFO     | monitor loop #9629: job 0:6895334127 is in state 'finished'
[2025-11-24 19:33:57] 2025-11-25 00:11:55,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:33:57] 2025-11-25 00:11:56,107 | INFO     | time since job start (170376s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:11:58,114 | INFO     | time since job start (170378s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:11:58,228 | INFO     | monitor loop #9630: job 0:6895334127 is in state 'finished'
[2025-11-24 19:33:57] 2025-11-25 00:11:58,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:33:57] 2025-11-25 00:12:00,121 | INFO     | time since job start (170380s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:12:00,334 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 19:33:57] 2025-11-25 00:12:00,371 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9822749999994
[2025-11-24 19:33:57] 2025-11-25 00:12:00,472 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895334127/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:33:57] 2025-11-25 00:12:00,474 | INFO     | extracted standard info from prmon json
[2025-11-24 19:33:57] 2025-11-25 00:12:00,474 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:33:57] 2025-11-25 00:12:00,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:33:57] 2025-11-25 00:12:00,840 | INFO     | monitor loop #9631: job 0:6895334127 is in state 'finished'
[2025-11-24 19:33:57] 2025-11-25 00:12:00,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:33:57] 2025-11-25 00:12:00,875 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:33:57] 2025-11-25 00:12:00,923 | INFO     | sum of square deviations: 6748693252743.843
[2025-11-24 19:33:57] 2025-11-25 00:12:01,909 | INFO     | sum of deviations: 12058782816307.865
[2025-11-24 19:33:57] 2025-11-25 00:12:01,909 | INFO     | mean x: 1763944296.1418338
[2025-11-24 19:33:57] 2025-11-25 00:12:01,910 | INFO     | mean y: 3145197.7578796563
[2025-11-24 19:33:57] 2025-11-25 00:12:01,910 | INFO     | intersect: -3148727375.2904177
[2025-11-24 19:33:57] 2025-11-25 00:12:01,914 | INFO     | chi2: 20.777349903255534
[2025-11-24 19:33:57] 2025-11-25 00:12:01,918 | INFO     | sum of square deviations: 6712503356415.694
[2025-11-24 19:33:57] 2025-11-25 00:12:02,266 | INFO     | time since job start (170382s) is within the limit (172800.0s)
[2025-11-24 19:33:57] 2025-11-25 00:12:02,737 | INFO     | sum of deviations: 13068215959815.395
[2025-11-24 19:33:57] 2025-11-25 00:12:02,737 | INFO     | mean x: 1763944143.6480086
[2025-11-24 19:33:57] 2025-11-25 00:12:02,737 | INFO     | mean y: 3149450.8668819517
[2025-11-24 19:33:57] 2025-11-25 00:12:02,738 | INFO     | intersect: -3430979634.254764
[2025-11-24 19:33:57] 2025-11-25 00:12:02,741 | INFO     | chi2: 17.637598234741315
[2025-11-24 19:33:57] 2025-11-25 00:12:02,741 | INFO     | current chi2=17.637598234741315 (change=15.111415474705279 %)
[2025-11-24 19:33:57] 2025-11-25 00:12:02,742 | INFO     | right removable region: 2786
[2025-11-24 19:33:57] 2025-11-25 00:12:02,745 | INFO     | sum of square deviations: 6712497323997.396
[2025-11-24 19:33:57] 2025-11-25 00:12:02,956 | INFO     | sum of deviations: 11183516645358.686
[2025-11-24 19:33:57] 2025-11-25 00:12:02,956 | INFO     | mean x: 1763944448.6483674
[2025-11-24 19:33:57] 2025-11-25 00:12:02,956 | INFO     | mean y: 3148884.066020811
[2025-11-24 19:33:57] 2025-11-25 00:12:02,956 | INFO     | intersect: -2935712936.0232077
[2025-11-24 19:33:57] 2025-11-25 00:12:02,960 | INFO     | chi2: 18.42052817581947
[2025-11-24 19:33:57] 2025-11-25 00:12:02,960 | INFO     | current chi2=18.42052817581947 (change=11.343225860901446 %)
[2025-11-24 19:33:57] 2025-11-25 00:12:02,960 | INFO     | left removable region: 10
[2025-11-24 19:33:57] 2025-11-25 00:12:02,965 | INFO     | sum of square deviations: 6633329525557.73
[2025-11-24 19:33:57] 2025-11-25 00:12:03,172 | INFO     | sum of deviations: 12122120609376.37
[2025-11-24 19:33:57] 2025-11-25 00:12:03,173 | INFO     | mean x: 1763944418.162464
[2025-11-24 19:33:57] 2025-11-25 00:12:03,173 | INFO     | mean y: 3155065.103386167
[2025-11-24 19:33:57] 2025-11-25 00:12:03,173 | INFO     | intersect: -3220376481.583004
[2025-11-24 19:33:57] 2025-11-25 00:12:03,177 | INFO     | chi2: 14.613562273884229
[2025-11-24 19:33:57] 2025-11-25 00:12:03,178 | INFO     | current memory leak: 1.83 B/s (using 2776 data points, chi2=14.61)
[2025-11-24 19:33:57] 2025-11-25 00:12:03,180 | INFO     | could have reported an average CPU frequency of 2900 MHz (95 samples)
[2025-11-24 19:33:57] 2025-11-25 00:12:03,180 | INFO     | ..............................
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . Timing measurements:
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . get job = 0 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . initial setup = 2 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . payload setup = 6 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . stage-in = 0 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . payload execution = 170294 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,181 | INFO     | . stage-out = 21 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,182 | INFO     | . log creation = 9 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,182 | INFO     | ..............................
[2025-11-24 19:33:57] 2025-11-25 00:12:03,338 | INFO     | 
[2025-11-24 19:33:57] 2025-11-25 00:12:03,338 | INFO     | job summary report
[2025-11-24 19:33:57] 2025-11-25 00:12:03,338 | INFO     | --------------------------------------------------
[2025-11-24 19:33:57] 2025-11-25 00:12:03,338 | INFO     | PanDA job id: 6895334127
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | task id: 47556137
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | errors: (none)
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | pilot state: finished 
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | transexitcode: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:03,339 | INFO     | exeerrorcode: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:03,340 | INFO     | exeerrordiag: 
[2025-11-24 19:33:57] 2025-11-25 00:12:03,341 | INFO     | exitcode: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:03,341 | INFO     | exitmsg: OK
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | cpuconsumptiontime: 507583 s
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | nevents: 1000
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | neventsw: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | pid: 879944
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | pgrp: 879944
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | corecount: 9
[2025-11-24 19:33:57] 2025-11-25 00:12:03,342 | INFO     | event service: False
[2025-11-24 19:33:57] 2025-11-25 00:12:03,343 | INFO     | sizes: {0: 2298585, 1: 2298784, 5: 2299046, 12: 2299102, 170301: 2399172, 170302: 2399171, 170324: 2409168, 170327: 2409224, 170367: 2409470}
[2025-11-24 19:33:57] 2025-11-25 00:12:03,343 | INFO     | --------------------------------------------------
[2025-11-24 19:33:57] 2025-11-25 00:12:03,343 | INFO     | 
[2025-11-24 19:33:57] 2025-11-25 00:12:03,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 19:33:57] 2025-11-25 00:12:03,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:33:57] 2025-11-25 00:12:03,556 | INFO     | job 6895334127 has completed (purged errors)
[2025-11-24 19:33:57] 2025-11-25 00:12:03,556 | INFO     | overall cleanup function is called
[2025-11-24 19:33:57] 2025-11-25 00:12:04,667 | INFO     | --- collectZombieJob: --- 10, [879944]
[2025-11-24 19:33:57] 2025-11-25 00:12:04,667 | INFO     | zombie collector waiting for pid 879944
[2025-11-24 19:33:57] 2025-11-25 00:12:04,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:33:57] 2025-11-25 00:12:04,667 | INFO     | collected zombie processes
[2025-11-24 19:33:57] 2025-11-25 00:12:04,668 | INFO     | will attempt to kill all subprocesses of pid=879944
[2025-11-24 19:33:57] 2025-11-25 00:12:06,056 | INFO     | process IDs to be killed: [879944] (in reverse order)
[2025-11-24 19:33:57] 2025-11-25 00:12:06,198 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:33:57] 2025-11-25 00:12:06,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:33:57] 2025-11-25 00:12:06,259 | INFO     | did not find any defunct processes belonging to 879944
[2025-11-24 19:33:57] 2025-11-25 00:12:06,273 | INFO     | did not find any defunct processes belonging to 879944
[2025-11-24 19:33:57] 2025-11-25 00:12:06,275 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:33:57] 2025-11-25 00:12:06,276 | INFO     | ready for new job
[2025-11-24 19:33:57] 2025-11-25 00:12:06,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:33:57] 2025-11-25 00:12:06,287 | INFO     | ***************************************
[2025-11-24 19:33:57] 2025-11-25 00:12:06,287 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:33:57] 2025-11-25 00:12:06,287 | INFO     | ***************************************
[2025-11-24 19:33:57] 2025-11-25 00:12:06,287 | INFO     | 
[2025-11-24 19:33:57] 2025-11-25 00:12:06,290 | INFO     | architecture information:
[2025-11-24 19:33:57] 2025-11-25 00:12:06,290 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:33:57] 2025-11-25 00:12:06,309 | INFO     | cat /etc/os-release:
[2025-11-24 19:33:57] NAME="CentOS Linux"
[2025-11-24 19:33:57] VERSION="7 (Core)"
[2025-11-24 19:33:57] ID="centos"
[2025-11-24 19:33:57] ID_LIKE="rhel fedora"
[2025-11-24 19:33:57] VERSION_ID="7"
[2025-11-24 19:33:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:33:57] ANSI_COLOR="0;31"
[2025-11-24 19:33:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:33:57] HOME_URL="https://www.centos.org/"
[2025-11-24 19:33:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:33:57] 
[2025-11-24 19:33:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:33:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:33:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:33:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:33:57] 
[2025-11-24 19:33:57] 2025-11-25 00:12:06,310 | INFO     | ***************************************
[2025-11-24 19:33:57] 2025-11-25 00:12:06,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 19:33:57] 2025-11-25 00:12:06,930 | INFO     | sufficient remaining disk space (49109008384 B)
[2025-11-24 19:33:57] 2025-11-25 00:12:06,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:33:57] 2025-11-25 00:12:06,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:33:57] 2025-11-25 00:12:06,931 | INFO     | update_server=False
[2025-11-24 19:33:57] 2025-11-25 00:12:06,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:33:57] 2025-11-25 00:12:06,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:33:57] 2025-11-25 00:12:06,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:33:57] 2025-11-25 00:12:06,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:33:57] 2025-11-25 00:12:06,939 | INFO     | aborting loop
[2025-11-24 19:33:57] 2025-11-25 00:12:07,400 | INFO     | all payload control threads have been joined
[2025-11-24 19:33:57] 2025-11-25 00:12:07,504 | INFO     | all data control threads have been joined
[2025-11-24 19:33:57] 2025-11-25 00:12:07,619 | INFO     | all job control threads have been joined
[2025-11-24 19:33:57] 2025-11-25 00:12:07,937 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:07,945 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,274 | INFO     | [job] validate thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,275 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,282 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,283 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:33:57] 2025-11-25 00:12:08,405 | INFO     | [payload] control thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,510 | INFO     | [data] control thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,637 | INFO     | [job] control thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:08,944 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:09,140 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:09,288 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:09,360 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:09,394 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:10,951 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:33:57] 2025-11-25 00:12:40,163 | INFO     | PID=873538 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 19:33:57] 2025-11-25 00:12:40,164 | INFO     | .. there are 9 such processes running
[2025-11-24 19:33:57] 2025-11-25 00:12:40,164 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:33:57] 2025-11-25 00:12:40,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:33:57] 2025-11-25 00:12:40,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:33:57] 2025-11-25 00:12:50,526 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:33:57] 2025-11-25 00:12:52,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350796277568)>', '<ExcThread(monitor, started 140349934663424)>']
[2025-11-24 19:33:57] 2025-11-25 00:12:52,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:33:57] 2025-11-25 00:12:52,234 | INFO     | [monitor] control thread has ended
[2025-11-24 19:33:57] 2025-11-25 00:12:57,173 | INFO     | all workflow threads have been joined
[2025-11-24 19:33:57] 2025-11-25 00:12:57,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:33:57] 2025-11-25 00:12:57,173 | INFO     | traces error code: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:57,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:33:57] 2025-11-25 00:12:58,560 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:33:57] 2025-11-25 00:12:58,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:33:57] 2025-11-25 00:12:58,678 [wrapper] pilotpid: 873538
[2025-11-24 19:33:57] 2025-11-25 00:12:58,734 [wrapper] Pilot exit status: 0
[2025-11-24 19:33:57] 2025-11-25 00:12:58,929 [wrapper] pandaids: 6895334127
[2025-11-24 19:33:57] 2025-11-25 00:12:59,872 [wrapper] cleanup supervisor_pilot  474272 873539
[2025-11-24 19:33:57] 2025-11-25 00:12:59,930 [wrapper] Test setup, not cleaning
[2025-11-24 19:33:57] 2025-11-25 00:12:59,979 [wrapper] apfmon messages muted
[2025-11-24 19:33:57] 2025-11-25 00:13:00,032 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:33:57] 2025-11-25 00:13:00,083 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:33:57]  *** Error codes and diagnostics ***
[2025-11-24 19:33:57]     "exeErrorCode": 0,
[2025-11-24 19:33:57]     "exeErrorDiag": "",
[2025-11-24 19:33:57]     "pilotErrorCode": 0,
[2025-11-24 19:33:57]     "pilotErrorDiag": "",
[2025-11-24 19:33:57]  *** Listing of results directory ***
[2025-11-24 19:33:57] total 1347124
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 21:36 pilot3.tar.gz
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 21:44 queuedata.json
[2025-11-24 19:33:57] -rwx------. 1 boincer umatlas     36292 Nov 21 21:44 runpilot2-wrapper.sh
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas       100 Nov 22 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:33:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 19:52 run_atlas
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas       105 Nov 22 19:52 job.xml
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas 410970329 Nov 22 19:52 EVNT.47483658._000226.pool.root.1
[2025-11-24 19:33:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 19:52 shared
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas    590095 Nov 22 19:52 input.tar.gz
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 19:52 start_atlas.sh
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas         0 Nov 22 19:52 boinc_lockfile
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 19:52 pandaJob.out
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas        57 Nov 22 19:52 setup.sh.local
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas    989784 Nov 22 19:52 agis_schedconf.cvmfs.json
[2025-11-24 19:33:57] drwx------. 5 boincer umatlas      4096 Nov 22 19:52 pilot3
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:33 boinc_task_state.xml
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas 916375385 Nov 24 19:09 HITS.47556137._002227.pool.root.1
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas      1058 Nov 24 19:10 memory_monitor_summary.json
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:11 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas   3468897 Nov 24 19:11 log.47556137._002227.job.log.tgz.1
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas        95 Nov 24 19:12 pilot_heartbeat.json
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas      8616 Nov 24 19:12 heartbeat.json
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas      4822 Nov 24 19:12 pilotlog.txt
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas  20623575 Nov 24 19:13 log.47556137._002227.job.log.1
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas       353 Nov 24 19:13 output.list
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:13 runtime_log
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas  24115200 Nov 24 19:13 result.tar.gz
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 19:13 runtime_log.err
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas       664 Nov 24 19:13 1viLDm6msg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1uHKDmb4ylOm.diag
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas      6525 Nov 24 19:27 init_data.xml
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:33 boinc_mmap_file
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:33 wrapper_checkpoint.txt
[2025-11-24 19:33:57] -rw-r--r--. 1 boincer umatlas     21731 Nov 24 19:33 stderr.txt
[2025-11-24 19:33:57] HITS file was successfully produced:
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas 916375385 Nov 24 19:09 shared/HITS.pool.root.1
[2025-11-24 19:33:57]  *** Contents of shared directory: ***
[2025-11-24 19:33:57] total 1320396
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas 410970329 Nov 22 19:52 ATLAS.root_0
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas    590095 Nov 22 19:52 input.tar.gz
[2025-11-24 19:33:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 19:52 start_atlas.sh
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas 916375385 Nov 24 19:09 HITS.pool.root.1
[2025-11-24 19:33:57] -rw-------. 1 boincer umatlas  24115200 Nov 24 19:13 result.tar.gz
19:33:59 (869785): run_atlas exited; CPU time 511946.674771
19:33:59 (869785): called boinc_finish(0)

</stderr_txt>
]]>

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