Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:51 (18662): wrapper (7.7.26015): starting
20:03:51 (18662): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 20:03:51] Arguments: --nthreads 8
[2025-11-22 20:03:51] Threads: 8
[2025-11-22 20:03:51] Checking for CVMFS
[2025-11-22 20:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:03:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:03:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:03:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:03:51] 2.11.2.0 14221 112663 132472 153191 2 90 9499733 18432000 1885 130560 0 82633794 99.974 4715118 30525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 20:03:51] CVMFS is ok
[2025-11-22 20:03:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:03:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:03:51] Further information can be found at the LHC@home message board.
[2025-11-22 20:03:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:03:51] Checking for apptainer binary...
[2025-11-22 20:03:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:03:51] Running /usr/bin/apptainer --version
[2025-11-22 20:03:51] apptainer version 1.3.2-1.el7
[2025-11-22 20:03:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:03:52] c-206-9.aglt2.org
[2025-11-22 20:03:52] apptainer works
[2025-11-22 20:03:52] Set ATHENA_PROC_NUMBER=8
[2025-11-22 20:03:52] Set ATHENA_CORE_NUMBER=8
[2025-11-22 20:03:52] Starting ATLAS job with PandaID=6895328092
[2025-11-22 20:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:39:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:39:15] 2025-11-23 20:38:41,502 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2361.4166666666665
[2025-11-23 15:39:15] 2025-11-23 20:38:41,505 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895328092/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,505 | INFO     | extracted standard info from prmon json
[2025-11-23 15:39:15] 2025-11-23 20:38:41,505 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:39:15] 2025-11-23 20:38:41,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:39:15] 2025-11-23 20:38:41,531 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:39:15] 2025-11-23 20:38:41,533 | INFO     | sum of square deviations: 477774033968.7445
[2025-11-23 15:39:15] 2025-11-23 20:38:41,576 | INFO     | sum of deviations: 2338360534097.578
[2025-11-23 15:39:15] 2025-11-23 20:38:41,577 | INFO     | mean x: 1763895066.5930736
[2025-11-23 15:39:15] 2025-11-23 20:38:41,577 | INFO     | mean y: 2872895.8225108227
[2025-11-23 15:39:15] 2025-11-23 20:38:41,577 | INFO     | intersect: -8630125795.522217
[2025-11-23 15:39:15] 2025-11-23 20:38:41,578 | INFO     | chi2: 5.6799709159196565
[2025-11-23 15:39:15] 2025-11-23 20:38:41,579 | INFO     | sum of square deviations: 471596182869.47876
[2025-11-23 15:39:15] 2025-11-23 20:38:41,607 | INFO     | sum of deviations: 2676401610218.8237
[2025-11-23 15:39:15] 2025-11-23 20:38:41,607 | INFO     | mean x: 1763894914.095652
[2025-11-23 15:39:15] 2025-11-23 20:38:41,607 | INFO     | mean y: 2881238.165217391
[2025-11-23 15:39:15] 2025-11-23 20:38:41,607 | INFO     | intersect: -10007571262.992905
[2025-11-23 15:39:15] 2025-11-23 20:38:41,608 | INFO     | chi2: 3.182738774889857
[2025-11-23 15:39:15] 2025-11-23 20:38:41,609 | INFO     | current chi2=3.182738774889857 (change=43.96557971856212 %)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,610 | INFO     | sum of square deviations: 465471821145.19836
[2025-11-23 15:39:15] 2025-11-23 20:38:41,650 | INFO     | sum of deviations: 2825877698992.8647
[2025-11-23 15:39:15] 2025-11-23 20:38:41,650 | INFO     | mean x: 1763894761.5982533
[2025-11-23 15:39:15] 2025-11-23 20:38:41,651 | INFO     | mean y: 2884957.9344978165
[2025-11-23 15:39:15] 2025-11-23 20:38:41,651 | INFO     | intersect: -10705713594.620993
[2025-11-23 15:39:15] 2025-11-23 20:38:41,652 | INFO     | chi2: 2.570617754906446
[2025-11-23 15:39:15] 2025-11-23 20:38:41,652 | INFO     | current chi2=2.570617754906446 (change=19.232524667519847 %)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,652 | INFO     | right removable region: 1144
[2025-11-23 15:39:15] 2025-11-23 20:38:41,653 | INFO     | sum of square deviations: 471595765019.47845
[2025-11-23 15:39:15] 2025-11-23 20:38:41,683 | INFO     | sum of deviations: 2025529471290.1504
[2025-11-23 15:39:15] 2025-11-23 20:38:41,684 | INFO     | mean x: 1763895219.095652
[2025-11-23 15:39:15] 2025-11-23 20:38:41,684 | INFO     | mean y: 2880609.5895652175
[2025-11-23 15:39:15] 2025-11-23 20:38:41,684 | INFO     | intersect: -7573145333.727528
[2025-11-23 15:39:15] 2025-11-23 20:38:41,685 | INFO     | chi2: 3.519875086286769
[2025-11-23 15:39:15] 2025-11-23 20:38:41,685 | INFO     | current chi2=3.519875086286769 (change=38.03005088597609 %)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,686 | INFO     | sum of square deviations: 465471265923.96906
[2025-11-23 15:39:15] 2025-11-23 20:38:41,733 | INFO     | sum of deviations: 1935709514949.148
[2025-11-23 15:39:15] 2025-11-23 20:38:41,733 | INFO     | mean x: 1763895371.59476
[2025-11-23 15:39:15] 2025-11-23 20:38:41,733 | INFO     | mean y: 2882845.6253275108
[2025-11-23 15:39:15] 2025-11-23 20:38:41,734 | INFO     | intersect: -7332455131.452839
[2025-11-23 15:39:15] 2025-11-23 20:38:41,735 | INFO     | chi2: 3.437065236387859
[2025-11-23 15:39:15] 2025-11-23 20:38:41,736 | INFO     | current chi2=3.437065236387859 (change=2.3526360415894434 %)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,736 | INFO     | left removable region: 20
[2025-11-23 15:39:15] 2025-11-23 20:38:41,737 | INFO     | sum of square deviations: 440327381287.63934
[2025-11-23 15:39:15] 2025-11-23 20:38:41,770 | INFO     | time since job start (70478s) is within the limit (172800.0s)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,778 | INFO     | sum of deviations: 2283778615441.9233
[2025-11-23 15:39:15] 2025-11-23 20:38:41,779 | INFO     | mean x: 1763895341.1005337
[2025-11-23 15:39:15] 2025-11-23 20:38:41,779 | INFO     | mean y: 2899099.1245551603
[2025-11-23 15:39:15] 2025-11-23 20:38:41,779 | INFO     | intersect: -9145626818.348562
[2025-11-23 15:39:15] 2025-11-23 20:38:41,781 | INFO     | chi2: 0.2178470213417116
[2025-11-23 15:39:15] 2025-11-23 20:38:41,781 | INFO     | current memory leak: 5.19 B/s (using 1124 data points, chi2=0.22)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,782 | INFO     | could have reported an average CPU frequency of 2626 MHz (42 samples)
[2025-11-23 15:39:15] 2025-11-23 20:38:41,782 | INFO     | ..............................
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . Timing measurements:
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . get job = 0 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . initial setup = 2 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . payload setup = 5 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . stage-in = 0 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,783 | INFO     | . payload execution = 70443 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,784 | INFO     | . stage-out = 4 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,784 | INFO     | . log creation = 0 s
[2025-11-23 15:39:15] 2025-11-23 20:38:41,784 | INFO     | ..............................
[2025-11-23 15:39:15] 2025-11-23 20:38:42,270 | INFO     | 
[2025-11-23 15:39:15] 2025-11-23 20:38:42,271 | INFO     | job summary report
[2025-11-23 15:39:15] 2025-11-23 20:38:42,271 | INFO     | --------------------------------------------------
[2025-11-23 15:39:15] 2025-11-23 20:38:42,271 | INFO     | PanDA job id: 6895328092
[2025-11-23 15:39:15] 2025-11-23 20:38:42,271 | INFO     | task id: 47556137
[2025-11-23 15:39:15] 2025-11-23 20:38:42,271 | INFO     | errors: (none)
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | pilot state: finished 
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | transexitcode: 0
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | exeerrorcode: 0
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | exeerrordiag: 
[2025-11-23 15:39:15] 2025-11-23 20:38:42,272 | INFO     | exitcode: 0
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | exitmsg: OK
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | cpuconsumptiontime: 542638 s
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | nevents: 1000
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | neventsw: 0
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | pid: 29620
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | pgrp: 29620
[2025-11-23 15:39:15] 2025-11-23 20:38:42,273 | INFO     | corecount: 8
[2025-11-23 15:39:15] 2025-11-23 20:38:42,274 | INFO     | event service: False
[2025-11-23 15:39:15] 2025-11-23 20:38:42,274 | INFO     | sizes: {0: 2298803, 4: 2299065, 11: 2299093, 70453: 2355804, 70457: 2364798, 70460: 2364854, 70464: 2365228}
[2025-11-23 15:39:15] 2025-11-23 20:38:42,274 | INFO     | --------------------------------------------------
[2025-11-23 15:39:15] 2025-11-23 20:38:42,274 | INFO     | 
[2025-11-23 15:39:15] 2025-11-23 20:38:42,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 15:39:15] 2025-11-23 20:38:42,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:39:15] 2025-11-23 20:38:42,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:39:15] 2025-11-23 20:38:42,296 | INFO     | job 6895328092 has completed (purged errors)
[2025-11-23 15:39:15] 2025-11-23 20:38:42,296 | INFO     | overall cleanup function is called
[2025-11-23 15:39:15] 2025-11-23 20:38:43,312 | INFO     | --- collectZombieJob: --- 10, [29620]
[2025-11-23 15:39:15] 2025-11-23 20:38:43,313 | INFO     | zombie collector waiting for pid 29620
[2025-11-23 15:39:15] 2025-11-23 20:38:43,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:39:15] 2025-11-23 20:38:43,313 | INFO     | collected zombie processes
[2025-11-23 15:39:15] 2025-11-23 20:38:43,313 | INFO     | will attempt to kill all subprocesses of pid=29620
[2025-11-23 15:39:15] 2025-11-23 20:38:43,460 | INFO     | process IDs to be killed: [29620] (in reverse order)
[2025-11-23 15:39:15] 2025-11-23 20:38:43,514 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:39:15] 2025-11-23 20:38:43,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:39:15] 2025-11-23 20:38:43,519 | INFO     | did not find any defunct processes belonging to 29620
[2025-11-23 15:39:15] 2025-11-23 20:38:43,525 | INFO     | did not find any defunct processes belonging to 29620
[2025-11-23 15:39:15] 2025-11-23 20:38:43,527 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:39:15] 2025-11-23 20:38:43,527 | INFO     | ready for new job
[2025-11-23 15:39:15] 2025-11-23 20:38:43,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:39:15] 2025-11-23 20:38:43,532 | INFO     | ***************************************
[2025-11-23 15:39:15] 2025-11-23 20:38:43,532 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:39:15] 2025-11-23 20:38:43,533 | INFO     | ***************************************
[2025-11-23 15:39:15] 2025-11-23 20:38:43,533 | INFO     | 
[2025-11-23 15:39:15] 2025-11-23 20:38:43,534 | INFO     | architecture information:
[2025-11-23 15:39:15] 2025-11-23 20:38:43,535 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:39:15] 2025-11-23 20:38:43,642 | INFO     | cat /etc/os-release:
[2025-11-23 15:39:15] NAME="CentOS Linux"
[2025-11-23 15:39:15] VERSION="7 (Core)"
[2025-11-23 15:39:15] ID="centos"
[2025-11-23 15:39:15] ID_LIKE="rhel fedora"
[2025-11-23 15:39:15] VERSION_ID="7"
[2025-11-23 15:39:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:39:15] ANSI_COLOR="0;31"
[2025-11-23 15:39:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:39:15] HOME_URL="https://www.centos.org/"
[2025-11-23 15:39:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:39:15] 
[2025-11-23 15:39:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:39:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:39:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:39:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:39:15] 
[2025-11-23 15:39:15] 2025-11-23 20:38:43,642 | INFO     | ***************************************
[2025-11-23 15:39:15] 2025-11-23 20:38:44,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 15:39:15] 2025-11-23 20:38:44,161 | INFO     | sufficient remaining disk space (26558332928 B)
[2025-11-23 15:39:15] 2025-11-23 20:38:44,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:39:15] 2025-11-23 20:38:44,161 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:39:15] 2025-11-23 20:38:44,161 | INFO     | update_server=False
[2025-11-23 15:39:15] 2025-11-23 20:38:44,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:39:15] 2025-11-23 20:38:44,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:39:15] 2025-11-23 20:38:44,335 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 15:39:15] 2025-11-23 20:38:44,335 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 15:39:15] 2025-11-23 20:38:44,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:39:15] 2025-11-23 20:38:44,335 | INFO     | will abort loop
[2025-11-23 15:39:15] 2025-11-23 20:38:44,606 | INFO     | all payload control threads have been joined
[2025-11-23 15:39:15] 2025-11-23 20:38:44,887 | INFO     | all data control threads have been joined
[2025-11-23 15:39:15] 2025-11-23 20:38:45,166 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:39:15] 2025-11-23 20:38:45,341 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,402 | INFO     | all job control threads have been joined
[2025-11-23 15:39:15] 2025-11-23 20:38:45,611 | INFO     | [payload] control thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,771 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,807 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,882 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,892 | INFO     | [data] control thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,946 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:45,957 | INFO     | [job] validate thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:46,099 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:46,407 | INFO     | [job] control thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:46,525 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:46,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:39:15] 2025-11-23 20:38:47,297 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:47,962 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:48,169 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:38:54,938 | INFO     | job.realtimelogging is not enabled
[2025-11-23 15:39:15] 2025-11-23 20:38:55,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:39:15] 2025-11-23 20:39:00,134 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:39:15] 2025-11-23 20:39:01,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089804339008)>', '<ExcThread(monitor, started 140089141225216)>']
[2025-11-23 15:39:15] 2025-11-23 20:39:06,164 | INFO     | all workflow threads have been joined
[2025-11-23 15:39:15] 2025-11-23 20:39:06,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:39:15] 2025-11-23 20:39:06,164 | INFO     | traces error code: 0
[2025-11-23 15:39:15] 2025-11-23 20:39:06,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:39:15] 2025-11-23 20:39:15,044 | INFO     | PID=22351 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 15:39:15] 2025-11-23 20:39:15,044 | INFO     | .. there are 3 such processes running
[2025-11-23 15:39:15] 2025-11-23 20:39:15,045 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:39:15] 2025-11-23 20:39:15,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:39:15] 2025-11-23 20:39:15,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:39:15] 2025-11-23 20:39:15,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:39:15] 2025-11-23 20:39:15,046 | INFO     | [monitor] control thread has ended
[2025-11-23 15:39:15] 2025-11-23 20:39:15,137 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:39:15] 2025-11-23 20:39:15,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:39:15] 2025-11-23 20:39:15,141 [wrapper] pilotpid: 22351
[2025-11-23 15:39:15] 2025-11-23 20:39:15,143 [wrapper] Pilot exit status: 0
[2025-11-23 15:39:15] 2025-11-23 20:39:15,152 [wrapper] pandaids: 6895328092
[2025-11-23 15:39:15] 2025-11-23 20:39:15,182 [wrapper] cleanup supervisor_pilot 17475 22352
[2025-11-23 15:39:15] 2025-11-23 20:39:15,184 [wrapper] Test setup, not cleaning
[2025-11-23 15:39:15] 2025-11-23 20:39:15,187 [wrapper] apfmon messages muted
[2025-11-23 15:39:15] 2025-11-23 20:39:15,189 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:39:15] 2025-11-23 20:39:15,191 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:39:15]  *** Error codes and diagnostics ***
[2025-11-23 15:39:15]     "exeErrorCode": 0,
[2025-11-23 15:39:15]     "exeErrorDiag": "",
[2025-11-23 15:39:15]     "pilotErrorCode": 0,
[2025-11-23 15:39:15]     "pilotErrorDiag": "",
[2025-11-23 15:39:15]  *** Listing of results directory ***
[2025-11-23 15:39:15] total 1335500
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 11:16 pilot3.tar.gz
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:21 queuedata.json
[2025-11-23 15:39:15] -rwx------ 1 boincer umatlas     36292 Nov 21 11:22 runpilot2-wrapper.sh
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas       100 Nov 22 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:39:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 20:03 run_atlas
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas       105 Nov 22 20:03 job.xml
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas 411165397 Nov 22 20:03 EVNT.47483658._000062.pool.root.1
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:03 start_atlas.sh
[2025-11-23 15:39:15] drwxrwx--x 2 boincer umatlas      4096 Nov 22 20:03 shared
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 20:03 input.tar.gz
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas         0 Nov 22 20:03 boinc_lockfile
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 20:03 pandaJob.out
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas        57 Nov 22 20:03 setup.sh.local
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas    989784 Nov 22 20:04 agis_schedconf.cvmfs.json
[2025-11-23 15:39:15] drwx------ 5 boincer umatlas      4096 Nov 22 20:04 pilot3
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas       533 Nov 23 15:25 boinc_task_state.xml
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas 928203956 Nov 23 15:37 HITS.47556137._000620.pool.root.1
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas      5953 Nov 23 15:37 init_data.xml
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas      1067 Nov 23 15:38 memory_monitor_summary.json
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas   1526164 Nov 23 15:38 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas   2339301 Nov 23 15:38 log.47556137._000620.job.log.tgz.1
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas      8660 Nov 23 15:38 heartbeat.json
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:39 boinc_mmap_file
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:39 wrapper_checkpoint.txt
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas        95 Nov 23 15:39 pilot_heartbeat.json
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas       820 Nov 23 15:39 pilotlog.txt
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas   9789572 Nov 23 15:39 log.47556137._000620.job.log.1
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas       353 Nov 23 15:39 output.list
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:39 runtime_log
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas  12144640 Nov 23 15:39 result.tar.gz
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 15:39 runtime_log.err
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas       667 Nov 23 15:39 gUsLDmz4ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6XJKDmUm9P6m.diag
[2025-11-23 15:39:15] -rw-r--r-- 1 boincer umatlas     21268 Nov 23 15:39 stderr.txt
[2025-11-23 15:39:15] HITS file was successfully produced:
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas 928203956 Nov 23 15:37 shared/HITS.pool.root.1
[2025-11-23 15:39:15]  *** Contents of shared directory: ***
[2025-11-23 15:39:15] total 1320448
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas 411165397 Nov 22 20:03 ATLAS.root_0
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 20:03 start_atlas.sh
[2025-11-23 15:39:15] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 20:03 input.tar.gz
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas 928203956 Nov 23 15:37 HITS.pool.root.1
[2025-11-23 15:39:15] -rw------- 1 boincer umatlas  12144640 Nov 23 15:39 result.tar.gz
15:39:16 (18662): run_atlas exited; CPU time 541307.950720
15:39:16 (18662): called boinc_finish(0)

</stderr_txt>
]]>

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