Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:40:52 (9619): wrapper (7.7.26015): starting
19:40:52 (9619): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 19:40:52] Arguments: --nthreads 8
[2025-11-22 19:40:52] Threads: 8
[2025-11-22 19:40:52] Checking for CVMFS
[2025-11-22 19:40:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:40:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:40:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:40:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:40:52] 2.11.2.0 14221 112640 132780 153191 1 81 9499564 18432001 1885 130560 0 82540300 99.974 4715113 30526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:40:52] CVMFS is ok
[2025-11-22 19:40:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:40:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:40:52] Further information can be found at the LHC@home message board.
[2025-11-22 19:40:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:40:52] Checking for apptainer binary...
[2025-11-22 19:40:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:40:52] Running /usr/bin/apptainer --version
[2025-11-22 19:40:52] apptainer version 1.3.2-1.el7
[2025-11-22 19:40:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:40:53] c-206-9.aglt2.org
[2025-11-22 19:40:53] apptainer works
[2025-11-22 19:40:53] Set ATHENA_PROC_NUMBER=8
[2025-11-22 19:40:53] Set ATHENA_CORE_NUMBER=8
[2025-11-22 19:40:53] Starting ATLAS job with PandaID=6895333998
[2025-11-22 19:40:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:52:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:52:05] 2025-11-23 19:51:20,509 | INFO     | monitor loop #4934: job 0:6895333998 is in state 'finished'
[2025-11-23 14:52:05] 2025-11-23 19:51:20,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:52:05] 2025-11-23 19:51:20,784 | INFO     | time since job start (69016s) is within the limit (172800.0s)
[2025-11-23 14:52:05] 2025-11-23 19:51:20,916 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 14:52:05] 2025-11-23 19:51:20,920 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.5
[2025-11-23 14:52:05] 2025-11-23 19:51:20,922 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895333998/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 14:52:05] 2025-11-23 19:51:20,923 | INFO     | extracted standard info from prmon json
[2025-11-23 14:52:05] 2025-11-23 19:51:20,923 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:52:05] 2025-11-23 19:51:20,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:52:05] 2025-11-23 19:51:20,938 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:52:05] 2025-11-23 19:51:20,939 | INFO     | sum of square deviations: 448607761264.3413
[2025-11-23 14:52:05] 2025-11-23 19:51:20,961 | INFO     | sum of deviations: 2159802404552.1567
[2025-11-23 14:52:05] 2025-11-23 19:51:20,962 | INFO     | mean x: 1763892954.5959327
[2025-11-23 14:52:05] 2025-11-23 19:51:20,962 | INFO     | mean y: 2869713.5561450045
[2025-11-23 14:52:05] 2025-11-23 19:51:20,962 | INFO     | intersect: -8489315606.5816145
[2025-11-23 14:52:05] 2025-11-23 19:51:20,963 | INFO     | chi2: 5.251114899446802
[2025-11-23 14:52:05] 2025-11-23 19:51:20,964 | INFO     | sum of square deviations: 442684534840.0574
[2025-11-23 14:52:05] 2025-11-23 19:51:20,986 | INFO     | sum of deviations: 2500886700534.42
[2025-11-23 14:52:05] 2025-11-23 19:51:20,986 | INFO     | mean x: 1763892802.098579
[2025-11-23 14:52:05] 2025-11-23 19:51:20,987 | INFO     | mean y: 2878492.825044405
[2025-11-23 14:52:05] 2025-11-23 19:51:20,987 | INFO     | intersect: -9961996497.738012
[2025-11-23 14:52:05] 2025-11-23 19:51:20,988 | INFO     | chi2: 2.5378820626125433
[2025-11-23 14:52:05] 2025-11-23 19:51:20,988 | INFO     | current chi2=2.5378820626125433 (change=51.669652803066526 %)
[2025-11-23 14:52:05] 2025-11-23 19:51:20,989 | INFO     | sum of square deviations: 436813613048.9593
[2025-11-23 14:52:05] 2025-11-23 19:51:21,011 | INFO     | sum of deviations: 2571475649301.3735
[2025-11-23 14:52:05] 2025-11-23 19:51:21,011 | INFO     | mean x: 1763892649.6003568
[2025-11-23 14:52:05] 2025-11-23 19:51:21,011 | INFO     | mean y: 2880322.0677966103
[2025-11-23 14:52:05] 2025-11-23 19:51:21,012 | INFO     | intersect: -10380969587.666157
[2025-11-23 14:52:05] 2025-11-23 19:51:21,013 | INFO     | chi2: 2.2596068044605837
[2025-11-23 14:52:05] 2025-11-23 19:51:21,013 | INFO     | current chi2=2.2596068044605837 (change=10.964861695168683 %)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,013 | INFO     | right removable region: 1120
[2025-11-23 14:52:05] 2025-11-23 19:51:21,015 | INFO     | sum of square deviations: 442684192447.2545
[2025-11-23 14:52:05] 2025-11-23 19:51:21,055 | INFO     | sum of deviations: 1871211428601.4548
[2025-11-23 14:52:05] 2025-11-23 19:51:21,055 | INFO     | mean x: 1763893107.097691
[2025-11-23 14:52:05] 2025-11-23 19:51:21,055 | INFO     | mean y: 2877134.404973357
[2025-11-23 14:52:05] 2025-11-23 19:51:21,055 | INFO     | intersect: -7453040644.330249
[2025-11-23 14:52:05] 2025-11-23 19:51:21,056 | INFO     | chi2: 3.2611264856193785
[2025-11-23 14:52:05] 2025-11-23 19:51:21,056 | INFO     | current chi2=3.2611264856193785 (change=37.89649344822118 %)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,057 | INFO     | sum of square deviations: 436812997071.1602
[2025-11-23 14:52:05] 2025-11-23 19:51:21,081 | INFO     | sum of deviations: 1795651711033.5994
[2025-11-23 14:52:05] 2025-11-23 19:51:21,081 | INFO     | mean x: 1763893259.5994647
[2025-11-23 14:52:05] 2025-11-23 19:51:21,081 | INFO     | mean y: 2879096.6717216773
[2025-11-23 14:52:05] 2025-11-23 19:51:21,082 | INFO     | intersect: -7248136717.686998
[2025-11-23 14:52:05] 2025-11-23 19:51:21,082 | INFO     | chi2: 3.207314757847529
[2025-11-23 14:52:05] 2025-11-23 19:51:21,083 | INFO     | current chi2=3.207314757847529 (change=1.650096309025228 %)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,083 | INFO     | left removable region: 20
[2025-11-23 14:52:05] 2025-11-23 19:51:21,084 | INFO     | sum of square deviations: 412721121666.9083
[2025-11-23 14:52:05] 2025-11-23 19:51:21,112 | INFO     | sum of deviations: 2105089835509.003
[2025-11-23 14:52:05] 2025-11-23 19:51:21,112 | INFO     | mean x: 1763893229.1090908
[2025-11-23 14:52:05] 2025-11-23 19:51:21,112 | INFO     | mean y: 2892393.8
[2025-11-23 14:52:05] 2025-11-23 19:51:21,112 | INFO     | intersect: -8993869614.705702
[2025-11-23 14:52:05] 2025-11-23 19:51:21,113 | INFO     | chi2: 0.18534300601432835
[2025-11-23 14:52:05] 2025-11-23 19:51:21,113 | INFO     | current memory leak: 5.10 B/s (using 1100 data points, chi2=0.19)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | could have reported an average CPU frequency of 2632 MHz (41 samples)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | ..............................
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | . Timing measurements:
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | . get job = 0 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | . initial setup = 2 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | . payload setup = 5 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,114 | INFO     | . stage-in = 0 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,115 | INFO     | . payload execution = 68981 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,115 | INFO     | . stage-out = 3 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,115 | INFO     | . log creation = 0 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,115 | INFO     | ..............................
[2025-11-23 14:52:05] 2025-11-23 19:51:21,556 | INFO     | 
[2025-11-23 14:52:05] 2025-11-23 19:51:21,556 | INFO     | job summary report
[2025-11-23 14:52:05] 2025-11-23 19:51:21,556 | INFO     | --------------------------------------------------
[2025-11-23 14:52:05] 2025-11-23 19:51:21,556 | INFO     | PanDA job id: 6895333998
[2025-11-23 14:52:05] 2025-11-23 19:51:21,556 | INFO     | task id: 47556137
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | errors: (none)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | pilot state: finished 
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | transexitcode: 0
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | exeerrorcode: 0
[2025-11-23 14:52:05] 2025-11-23 19:51:21,557 | INFO     | exeerrordiag: 
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | exitcode: 0
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | exitmsg: OK
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | cpuconsumptiontime: 536987 s
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | nevents: 1000
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | neventsw: 0
[2025-11-23 14:52:05] 2025-11-23 19:51:21,558 | INFO     | pid: 19763
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | pgrp: 19763
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | corecount: 8
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | event service: False
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | sizes: {0: 2298693, 1: 2298835, 4: 2299097, 11: 2299125, 68990: 2355242, 68995: 2364236, 68997: 2364420, 69001: 2364762}
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | --------------------------------------------------
[2025-11-23 14:52:05] 2025-11-23 19:51:21,559 | INFO     | 
[2025-11-23 14:52:05] 2025-11-23 19:51:21,560 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 14:52:05] 2025-11-23 19:51:21,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,580 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:52:05] 2025-11-23 19:51:21,583 | INFO     | job 6895333998 has completed (purged errors)
[2025-11-23 14:52:05] 2025-11-23 19:51:21,583 | INFO     | overall cleanup function is called
[2025-11-23 14:52:05] 2025-11-23 19:51:22,599 | INFO     | --- collectZombieJob: --- 10, [19763]
[2025-11-23 14:52:05] 2025-11-23 19:51:22,599 | INFO     | zombie collector waiting for pid 19763
[2025-11-23 14:52:05] 2025-11-23 19:51:22,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:52:05] 2025-11-23 19:51:22,599 | INFO     | collected zombie processes
[2025-11-23 14:52:05] 2025-11-23 19:51:22,599 | INFO     | will attempt to kill all subprocesses of pid=19763
[2025-11-23 14:52:05] 2025-11-23 19:51:22,768 | INFO     | process IDs to be killed: [19763] (in reverse order)
[2025-11-23 14:52:05] 2025-11-23 19:51:22,831 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:52:05] 2025-11-23 19:51:22,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:52:05] 2025-11-23 19:51:22,837 | INFO     | did not find any defunct processes belonging to 19763
[2025-11-23 14:52:05] 2025-11-23 19:51:22,842 | INFO     | did not find any defunct processes belonging to 19763
[2025-11-23 14:52:05] 2025-11-23 19:51:22,844 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:52:05] 2025-11-23 19:51:22,844 | INFO     | ready for new job
[2025-11-23 14:52:05] 2025-11-23 19:51:22,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:52:05] 2025-11-23 19:51:22,849 | INFO     | ***************************************
[2025-11-23 14:52:05] 2025-11-23 19:51:22,849 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:52:05] 2025-11-23 19:51:22,849 | INFO     | ***************************************
[2025-11-23 14:52:05] 2025-11-23 19:51:22,849 | INFO     | 
[2025-11-23 14:52:05] 2025-11-23 19:51:22,851 | INFO     | architecture information:
[2025-11-23 14:52:05] 2025-11-23 19:51:22,851 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:52:05] 2025-11-23 19:51:22,862 | INFO     | cat /etc/os-release:
[2025-11-23 14:52:05] NAME="CentOS Linux"
[2025-11-23 14:52:05] VERSION="7 (Core)"
[2025-11-23 14:52:05] ID="centos"
[2025-11-23 14:52:05] ID_LIKE="rhel fedora"
[2025-11-23 14:52:05] VERSION_ID="7"
[2025-11-23 14:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:52:05] ANSI_COLOR="0;31"
[2025-11-23 14:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:52:05] HOME_URL="https://www.centos.org/"
[2025-11-23 14:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:52:05] 
[2025-11-23 14:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:52:05] 
[2025-11-23 14:52:05] 2025-11-23 19:51:22,862 | INFO     | ***************************************
[2025-11-23 14:52:05] 2025-11-23 19:51:23,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 14:52:05] 2025-11-23 19:51:23,381 | INFO     | sufficient remaining disk space (25729957888 B)
[2025-11-23 14:52:05] 2025-11-23 19:51:23,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:52:05] 2025-11-23 19:51:23,381 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:52:05] 2025-11-23 19:51:23,382 | INFO     | update_server=False
[2025-11-23 14:52:05] 2025-11-23 19:51:23,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:52:05] 2025-11-23 19:51:23,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:52:05] 2025-11-23 19:51:23,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:52:05] 2025-11-23 19:51:23,614 | INFO     | all payload control threads have been joined
[2025-11-23 14:52:05] 2025-11-23 19:51:23,930 | INFO     | all data control threads have been joined
[2025-11-23 14:52:05] 2025-11-23 19:51:24,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:52:05] 2025-11-23 19:51:24,017 | INFO     | aborting loop
[2025-11-23 14:52:05] 2025-11-23 19:51:24,387 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,417 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,502 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,504 | INFO     | [job] validate thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,535 | INFO     | all job control threads have been joined
[2025-11-23 14:52:05] 2025-11-23 19:51:24,619 | INFO     | [payload] control thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,875 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:24,938 | INFO     | [data] control thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,022 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,092 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,198 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,389 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,473 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:25,540 | INFO     | [job] control thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:26,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:52:05] 2025-11-23 19:51:27,234 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:27,389 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:52:05] 2025-11-23 19:51:54,007 | INFO     | PID=13306 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 14:52:05] 2025-11-23 19:51:54,008 | INFO     | .. there are 3 such processes running
[2025-11-23 14:52:05] 2025-11-23 19:51:54,009 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:52:05] 2025-11-23 19:51:54,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:52:05] 2025-11-23 19:51:54,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:52:05] 2025-11-23 19:51:58,573 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:52:05] 2025-11-23 19:52:00,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548693669696)>', '<ExcThread(monitor, started 140547905812224)>']
[2025-11-23 14:52:05] 2025-11-23 19:52:01,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:52:05] 2025-11-23 19:52:01,044 | INFO     | [monitor] control thread has ended
[2025-11-23 14:52:05] 2025-11-23 19:52:05,229 | INFO     | all workflow threads have been joined
[2025-11-23 14:52:05] 2025-11-23 19:52:05,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:52:05] 2025-11-23 19:52:05,229 | INFO     | traces error code: 0
[2025-11-23 14:52:05] 2025-11-23 19:52:05,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:52:05] 2025-11-23 19:52:05,353 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:52:05] 2025-11-23 19:52:05,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:52:05] 2025-11-23 19:52:05,358 [wrapper] pilotpid: 13306
[2025-11-23 14:52:05] 2025-11-23 19:52:05,361 [wrapper] Pilot exit status: 0
[2025-11-23 14:52:05] 2025-11-23 19:52:05,371 [wrapper] pandaids: 6895333998
[2025-11-23 14:52:05] 2025-11-23 19:52:05,415 [wrapper] cleanup supervisor_pilot 11898 13307
[2025-11-23 14:52:05] 2025-11-23 19:52:05,418 [wrapper] Test setup, not cleaning
[2025-11-23 14:52:05] 2025-11-23 19:52:05,420 [wrapper] apfmon messages muted
[2025-11-23 14:52:05] 2025-11-23 19:52:05,423 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:52:05] 2025-11-23 19:52:05,425 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:52:05]  *** Error codes and diagnostics ***
[2025-11-23 14:52:05]     "exeErrorCode": 0,
[2025-11-23 14:52:05]     "exeErrorDiag": "",
[2025-11-23 14:52:05]     "pilotErrorCode": 0,
[2025-11-23 14:52:05]     "pilotErrorDiag": "",
[2025-11-23 14:52:05]  *** Listing of results directory ***
[2025-11-23 14:52:05] total 1330364
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 21:10 pilot3.tar.gz
[2025-11-23 14:52:05] -rwx------ 1 boincer umatlas     36292 Nov 21 21:18 runpilot2-wrapper.sh
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 21:18 queuedata.json
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas       100 Nov 22 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:52:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 19:40 run_atlas
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas       105 Nov 22 19:40 job.xml
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas 408754261 Nov 22 19:40 EVNT.47483658._000218.pool.root.1
[2025-11-23 14:52:05] drwxrwx--x 2 boincer umatlas      4096 Nov 22 19:40 shared
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas    590096 Nov 22 19:40 input.tar.gz
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:40 start_atlas.sh
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas         0 Nov 22 19:40 boinc_lockfile
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 19:40 pandaJob.out
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas        57 Nov 22 19:40 setup.sh.local
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas    989784 Nov 22 19:41 agis_schedconf.cvmfs.json
[2025-11-23 14:52:05] drwx------ 5 boincer umatlas      4096 Nov 22 19:41 pilot3
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas       533 Nov 23 14:41 boinc_task_state.xml
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas      5953 Nov 23 14:48 init_data.xml
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas 925904427 Nov 23 14:50 HITS.47556137._002146.pool.root.1
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas      1068 Nov 23 14:51 memory_monitor_summary.json
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas   1526164 Nov 23 14:51 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas   2305538 Nov 23 14:51 log.47556137._002146.job.log.tgz.1
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas      8664 Nov 23 14:51 heartbeat.json
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas        95 Nov 23 14:51 pilot_heartbeat.json
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 14:51 boinc_mmap_file
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas        29 Nov 23 14:51 wrapper_checkpoint.txt
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas      4821 Nov 23 14:52 pilotlog.txt
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas   9548955 Nov 23 14:52 log.47556137._002146.job.log.1
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas       353 Nov 23 14:52 output.list
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas       620 Nov 23 14:52 runtime_log
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas  11878400 Nov 23 14:52 result.tar.gz
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas       667 Nov 23 14:52 TiINDm5Nsg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIuHKDmanUqMm.diag
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 14:52 runtime_log.err
[2025-11-23 14:52:05] -rw-r--r-- 1 boincer umatlas     21287 Nov 23 14:52 stderr.txt
[2025-11-23 14:52:05] HITS file was successfully produced:
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas 925904427 Nov 23 14:50 shared/HITS.pool.root.1
[2025-11-23 14:52:05]  *** Contents of shared directory: ***
[2025-11-23 14:52:05] total 1315580
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas 408754261 Nov 22 19:40 ATLAS.root_0
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas    590096 Nov 22 19:40 input.tar.gz
[2025-11-23 14:52:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:40 start_atlas.sh
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas 925904427 Nov 23 14:50 HITS.pool.root.1
[2025-11-23 14:52:05] -rw------- 1 boincer umatlas  11878400 Nov 23 14:52 result.tar.gz
14:52:06 (9619): run_atlas exited; CPU time 536175.884270
14:52:06 (9619): called boinc_finish(0)

</stderr_txt>
]]>

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