Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:40 (21929): wrapper (7.7.26015): starting
19:00:40 (21929): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 19:00:40] Arguments: --nthreads 12
[2025-11-22 19:00:40] Threads: 12
[2025-11-22 19:00:40] Checking for CVMFS
[2025-11-22 19:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:00:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:00:40] 2.11.2.0 30551 112555 94164 153190 3 82 11851544 20275200 1 130560 0 49980125 99.914 6215394 28626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:00:40] CVMFS is ok
[2025-11-22 19:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:00:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:00:40] Further information can be found at the LHC@home message board.
[2025-11-22 19:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:00:40] Checking for apptainer binary...
[2025-11-22 19:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:00:40] Running /usr/bin/apptainer --version
[2025-11-22 19:00:40] apptainer version 1.3.2-1.el7
[2025-11-22 19:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:00:42] c-205-16.aglt2.org
[2025-11-22 19:00:42] apptainer works
[2025-11-22 19:00:42] Set ATHENA_PROC_NUMBER=12
[2025-11-22 19:00:42] Set ATHENA_CORE_NUMBER=12
[2025-11-22 19:00:42] Starting ATLAS job with PandaID=6895333811
[2025-11-22 19:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:08:00]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:08:00] 2025-11-23 07:07:24,771 | INFO     | time since job start (25587s) is within the limit (172800.0s)
[2025-11-23 02:08:00] 2025-11-23 07:07:26,776 | INFO     | time since job start (25589s) is within the limit (172800.0s)
[2025-11-23 02:08:00] 2025-11-23 07:07:26,831 | INFO     | monitor loop #1919: job 0:6895333811 is in state 'finished'
[2025-11-23 02:08:00] 2025-11-23 07:07:26,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,399 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 02:08:00] 2025-11-23 07:07:28,403 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,405 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333811/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,406 | INFO     | extracted standard info from prmon json
[2025-11-23 02:08:00] 2025-11-23 07:07:28,406 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:08:00] 2025-11-23 07:07:28,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:08:00] 2025-11-23 07:07:28,414 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:08:00] 2025-11-23 07:07:28,415 | INFO     | sum of square deviations: 22809713220.964153
[2025-11-23 02:08:00] 2025-11-23 07:07:28,419 | INFO     | sum of deviations: 423127720141.1931
[2025-11-23 02:08:00] 2025-11-23 07:07:28,419 | INFO     | mean x: 1763868836.1622913
[2025-11-23 02:08:00] 2025-11-23 07:07:28,419 | INFO     | mean y: 3421129.923627685
[2025-11-23 02:08:00] 2025-11-23 07:07:28,419 | INFO     | intersect: -32716928838.68078
[2025-11-23 02:08:00] 2025-11-23 07:07:28,419 | INFO     | chi2: 5.246864121135986
[2025-11-23 02:08:00] 2025-11-23 07:07:28,420 | INFO     | sum of square deviations: 22002863018.33094
[2025-11-23 02:08:00] 2025-11-23 07:07:28,424 | INFO     | sum of deviations: 563955834989.4276
[2025-11-23 02:08:00] 2025-11-23 07:07:28,424 | INFO     | mean x: 1763868683.664251
[2025-11-23 02:08:00] 2025-11-23 07:07:28,424 | INFO     | mean y: 3447704.427536232
[2025-11-23 02:08:00] 2025-11-23 07:07:28,424 | INFO     | intersect: -45206306838.826126
[2025-11-23 02:08:00] 2025-11-23 07:07:28,425 | INFO     | chi2: 2.7564997379782388
[2025-11-23 02:08:00] 2025-11-23 07:07:28,425 | INFO     | current chi2=2.7564997379782388 (change=47.46386271231595 %)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,425 | INFO     | sum of square deviations: 21215268990.694355
[2025-11-23 02:08:00] 2025-11-23 07:07:28,429 | INFO     | sum of deviations: 587348135901.4691
[2025-11-23 02:08:00] 2025-11-23 07:07:28,429 | INFO     | mean x: 1763868531.166259
[2025-11-23 02:08:00] 2025-11-23 07:07:28,429 | INFO     | mean y: 3452194.816625917
[2025-11-23 02:08:00] 2025-11-23 07:07:28,429 | INFO     | intersect: -48829531926.67564
[2025-11-23 02:08:00] 2025-11-23 07:07:28,430 | INFO     | chi2: 2.5109588522169517
[2025-11-23 02:08:00] 2025-11-23 07:07:28,430 | INFO     | current chi2=2.5109588522169517 (change=8.907705753724454 %)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,430 | INFO     | right removable region: 408
[2025-11-23 02:08:00] 2025-11-23 07:07:28,430 | INFO     | sum of square deviations: 22002821538.33094
[2025-11-23 02:08:00] 2025-11-23 07:07:28,434 | INFO     | sum of deviations: 283352135265.0317
[2025-11-23 02:08:00] 2025-11-23 07:07:28,434 | INFO     | mean x: 1763868988.664251
[2025-11-23 02:08:00] 2025-11-23 07:07:28,434 | INFO     | mean y: 3447468.698067633
[2025-11-23 02:08:00] 2025-11-23 07:07:28,434 | INFO     | intersect: -22711641293.67256
[2025-11-23 02:08:00] 2025-11-23 07:07:28,435 | INFO     | chi2: 2.8964837815795934
[2025-11-23 02:08:00] 2025-11-23 07:07:28,435 | INFO     | current chi2=2.8964837815795934 (change=44.79590637936165 %)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,436 | INFO     | sum of square deviations: 21215186030.694363
[2025-11-23 02:08:00] 2025-11-23 07:07:28,439 | INFO     | sum of deviations: 251021600980.05612
[2025-11-23 02:08:00] 2025-11-23 07:07:28,439 | INFO     | mean x: 1763869141.166259
[2025-11-23 02:08:00] 2025-11-23 07:07:28,439 | INFO     | mean y: 3453722.337408313
[2025-11-23 02:08:00] 2025-11-23 07:07:28,440 | INFO     | intersect: -20866938603.90793
[2025-11-23 02:08:00] 2025-11-23 07:07:28,440 | INFO     | chi2: 2.848312971750536
[2025-11-23 02:08:00] 2025-11-23 07:07:28,440 | INFO     | current chi2=2.848312971750536 (change=1.6630788729218269 %)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,440 | INFO     | left removable region: 20
[2025-11-23 02:08:00] 2025-11-23 07:07:28,441 | INFO     | sum of square deviations: 18112260843.430386
[2025-11-23 02:08:00] 2025-11-23 07:07:28,444 | INFO     | sum of deviations: 366717565309.2343
[2025-11-23 02:08:00] 2025-11-23 07:07:28,444 | INFO     | mean x: 1763869110.6726804
[2025-11-23 02:08:00] 2025-11-23 07:07:28,444 | INFO     | mean y: 3495773.899484536
[2025-11-23 02:08:00] 2025-11-23 07:07:28,444 | INFO     | intersect: -35709427719.286064
[2025-11-23 02:08:00] 2025-11-23 07:07:28,445 | INFO     | chi2: 0.06281537266400579
[2025-11-23 02:08:00] 2025-11-23 07:07:28,445 | INFO     | current memory leak: 20.25 B/s (using 388 data points, chi2=0.06)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,445 | INFO     | could have reported an average CPU frequency of 2373 MHz (18 samples)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | ..............................
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . Timing measurements:
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . get job = 0 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . initial setup = 2 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . payload setup = 7 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . stage-in = 0 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . payload execution = 25554 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . stage-out = 3 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | . log creation = 0 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,446 | INFO     | ..............................
[2025-11-23 02:08:00] 2025-11-23 07:07:28,527 | INFO     | 
[2025-11-23 02:08:00] 2025-11-23 07:07:28,527 | INFO     | job summary report
[2025-11-23 02:08:00] 2025-11-23 07:07:28,527 | INFO     | --------------------------------------------------
[2025-11-23 02:08:00] 2025-11-23 07:07:28,527 | INFO     | PanDA job id: 6895333811
[2025-11-23 02:08:00] 2025-11-23 07:07:28,527 | INFO     | task id: 47556149
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | errors: (none)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | pilot state: finished 
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | transexitcode: 0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | exeerrorcode: 0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,530 | INFO     | exeerrordiag: 
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | exitcode: 0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | exitmsg: OK
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | cpuconsumptiontime: 293250 s
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | nevents: 1000
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | neventsw: 0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,531 | INFO     | pid: 32118
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | pgrp: 32118
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | corecount: 12
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | event service: False
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | sizes: {0: 2298633, 1: 2298832, 6: 2299094, 11: 2299122, 25566: 2336302, 25569: 2345480, 25575: 2345670}
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | --------------------------------------------------
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | 
[2025-11-23 02:08:00] 2025-11-23 07:07:28,532 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 02:08:00] 2025-11-23 07:07:28,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:08:00] 2025-11-23 07:07:28,561 | INFO     | job 6895333811 has completed (purged errors)
[2025-11-23 02:08:00] 2025-11-23 07:07:28,561 | INFO     | overall cleanup function is called
[2025-11-23 02:08:00] 2025-11-23 07:07:29,578 | INFO     | --- collectZombieJob: --- 10, [32118]
[2025-11-23 02:08:00] 2025-11-23 07:07:29,578 | INFO     | zombie collector waiting for pid 32118
[2025-11-23 02:08:00] 2025-11-23 07:07:29,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:08:00] 2025-11-23 07:07:29,578 | INFO     | collected zombie processes
[2025-11-23 02:08:00] 2025-11-23 07:07:29,578 | INFO     | will attempt to kill all subprocesses of pid=32118
[2025-11-23 02:08:00] 2025-11-23 07:07:29,672 | INFO     | process IDs to be killed: [32118] (in reverse order)
[2025-11-23 02:08:00] 2025-11-23 07:07:29,722 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:08:00] 2025-11-23 07:07:29,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:08:00] 2025-11-23 07:07:29,726 | INFO     | did not find any defunct processes belonging to 32118
[2025-11-23 02:08:00] 2025-11-23 07:07:29,730 | INFO     | did not find any defunct processes belonging to 32118
[2025-11-23 02:08:00] 2025-11-23 07:07:29,733 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:08:00] 2025-11-23 07:07:29,733 | INFO     | ready for new job
[2025-11-23 02:08:00] 2025-11-23 07:07:29,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:08:00] 2025-11-23 07:07:29,735 | INFO     | ***************************************
[2025-11-23 02:08:00] 2025-11-23 07:07:29,735 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:08:00] 2025-11-23 07:07:29,736 | INFO     | ***************************************
[2025-11-23 02:08:00] 2025-11-23 07:07:29,736 | INFO     | 
[2025-11-23 02:08:00] 2025-11-23 07:07:29,736 | INFO     | architecture information:
[2025-11-23 02:08:00] 2025-11-23 07:07:29,737 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:08:00] 2025-11-23 07:07:29,752 | INFO     | cat /etc/os-release:
[2025-11-23 02:08:00] NAME="CentOS Linux"
[2025-11-23 02:08:00] VERSION="7 (Core)"
[2025-11-23 02:08:00] ID="centos"
[2025-11-23 02:08:00] ID_LIKE="rhel fedora"
[2025-11-23 02:08:00] VERSION_ID="7"
[2025-11-23 02:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:08:00] ANSI_COLOR="0;31"
[2025-11-23 02:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:08:00] HOME_URL="https://www.centos.org/"
[2025-11-23 02:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:08:00] 
[2025-11-23 02:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:08:00] 
[2025-11-23 02:08:00] 2025-11-23 07:07:29,753 | INFO     | ***************************************
[2025-11-23 02:08:00] 2025-11-23 07:07:30,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 02:08:00] 2025-11-23 07:07:30,272 | INFO     | sufficient remaining disk space (28384952320 B)
[2025-11-23 02:08:00] 2025-11-23 07:07:30,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:08:00] 2025-11-23 07:07:30,273 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:08:00] 2025-11-23 07:07:30,273 | INFO     | update_server=False
[2025-11-23 02:08:00] 2025-11-23 07:07:30,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:08:00] 2025-11-23 07:07:30,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:08:00] 2025-11-23 07:07:30,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:08:00] 2025-11-23 07:07:30,335 | INFO     | aborting loop
[2025-11-23 02:08:00] 2025-11-23 07:07:30,404 | INFO     | all payload control threads have been joined
[2025-11-23 02:08:00] 2025-11-23 07:07:30,969 | INFO     | all data control threads have been joined
[2025-11-23 02:08:00] 2025-11-23 07:07:31,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:08:00] 2025-11-23 07:07:31,279 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,281 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,340 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,409 | INFO     | [payload] control thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,665 | INFO     | [job] validate thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,898 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,943 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,950 | INFO     | all job control threads have been joined
[2025-11-23 02:08:00] 2025-11-23 07:07:31,974 | INFO     | [data] control thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:31,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:32,160 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:32,174 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:32,647 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:32,658 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:32,955 | INFO     | [job] control thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:33,105 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:33,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:08:00] 2025-11-23 07:07:37,683 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:08:00] 2025-11-23 07:07:39,218 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:08:00] 2025-11-23 07:07:40,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135506261824)>', '<ExcThread(monitor, started 140135203051264)>']
[2025-11-23 02:08:00] 2025-11-23 07:07:45,076 | INFO     | all workflow threads have been joined
[2025-11-23 02:08:00] 2025-11-23 07:07:45,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:08:00] 2025-11-23 07:07:45,088 | INFO     | traces error code: 0
[2025-11-23 02:08:00] 2025-11-23 07:07:45,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:08:00] 2025-11-23 07:07:59,978 | INFO     | PID=25624 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 02:08:00] 2025-11-23 07:07:59,979 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:08:00] 2025-11-23 07:07:59,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:08:00] 2025-11-23 07:07:59,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:08:00] 2025-11-23 07:07:59,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:08:00] 2025-11-23 07:07:59,979 | INFO     | [monitor] control thread has ended
[2025-11-23 02:08:00] 2025-11-23 07:08:00,066 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:08:00] 2025-11-23 07:08:00,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:08:00] 2025-11-23 07:08:00,074 [wrapper] pilotpid: 25624
[2025-11-23 02:08:00] 2025-11-23 07:08:00,078 [wrapper] Pilot exit status: 0
[2025-11-23 02:08:00] 2025-11-23 07:08:00,093 [wrapper] pandaids: 6895333811
[2025-11-23 02:08:00] 2025-11-23 07:08:00,130 [wrapper] cleanup supervisor_pilot  7098 25625
[2025-11-23 02:08:00] 2025-11-23 07:08:00,134 [wrapper] Test setup, not cleaning
[2025-11-23 02:08:00] 2025-11-23 07:08:00,138 [wrapper] apfmon messages muted
[2025-11-23 02:08:00] 2025-11-23 07:08:00,142 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:08:00] 2025-11-23 07:08:00,147 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:08:00]  *** Error codes and diagnostics ***
[2025-11-23 02:08:00]     "exeErrorCode": 0,
[2025-11-23 02:08:00]     "exeErrorDiag": "",
[2025-11-23 02:08:00]     "pilotErrorCode": 0,
[2025-11-23 02:08:00]     "pilotErrorDiag": "",
[2025-11-23 02:08:00]  *** Listing of results directory ***
[2025-11-23 02:08:00] total 1311760
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 20:56 queuedata.json
[2025-11-23 02:08:00] -rwx------ 1 boincer umatlas     36292 Nov 21 20:58 runpilot2-wrapper.sh
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas       100 Nov 22 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:08:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 19:00 run_atlas
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas       105 Nov 22 19:00 job.xml
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas 411868229 Nov 22 19:00 EVNT.47483658._001056.pool.root.1
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:00 start_atlas.sh
[2025-11-23 02:08:00] drwxrwx--x 2 boincer umatlas      4096 Nov 22 19:00 shared
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 19:00 input.tar.gz
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas         0 Nov 22 19:00 boinc_lockfile
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 19:00 pandaJob.out
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas        57 Nov 22 19:00 setup.sh.local
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas    989784 Nov 22 19:00 agis_schedconf.cvmfs.json
[2025-11-23 02:08:00] drwx------ 5 boincer umatlas      4096 Nov 22 19:00 pilot3
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas       532 Nov 23 01:58 boinc_task_state.xml
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 02:00 init_data.xml
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas 915944099 Nov 23 02:06 HITS.47556149._000422.pool.root.1
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas      1061 Nov 23 02:07 memory_monitor_summary.json
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas   1526164 Nov 23 02:07 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas   2171485 Nov 23 02:07 log.47556149._000422.job.log.tgz.1
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas      8660 Nov 23 02:07 heartbeat.json
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 02:07 boinc_mmap_file
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas        29 Nov 23 02:07 wrapper_checkpoint.txt
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas       745 Nov 23 02:07 pilotlog.txt
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas        95 Nov 23 02:07 pilot_heartbeat.json
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas   3583448 Nov 23 02:08 log.47556149._000422.job.log.1
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas       353 Nov 23 02:08 output.list
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas       620 Nov 23 02:08 runtime_log
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas   5775360 Nov 23 02:08 result.tar.gz
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 02:08 runtime_log.err
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas       670 Nov 23 02:08 3PUKDmz4rg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRrJKDmJlHfxm.diag
[2025-11-23 02:08:00] -rw-r--r-- 1 boincer umatlas     21302 Nov 23 02:08 stderr.txt
[2025-11-23 02:08:00] HITS file was successfully produced:
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas 915944099 Nov 23 02:06 shared/HITS.pool.root.1
[2025-11-23 02:08:00]  *** Contents of shared directory: ***
[2025-11-23 02:08:00] total 1302936
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas 411868229 Nov 22 19:00 ATLAS.root_0
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:00 start_atlas.sh
[2025-11-23 02:08:00] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 19:00 input.tar.gz
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas 915944099 Nov 23 02:06 HITS.pool.root.1
[2025-11-23 02:08:00] -rw------- 1 boincer umatlas   5775360 Nov 23 02:08 result.tar.gz
02:08:01 (21929): run_atlas exited; CPU time 286287.758328
02:08:01 (21929): called boinc_finish(0)

</stderr_txt>
]]>

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