Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:42 (15028): wrapper (7.7.26015): starting
19:02:42 (15028): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 19:02:42] Arguments: --nthreads 8
[2025-11-22 19:02:42] Threads: 8
[2025-11-22 19:02:42] Checking for CVMFS
[2025-11-22 19:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:02:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:02:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:02:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:02:42] 2.11.2.0 2822 68233 85036 153190 1 82 12751900 20275201 1 130560 0 18975710 99.860 4059295 31609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 19:02:42] CVMFS is ok
[2025-11-22 19:02:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 19:02:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 19:02:42] Further information can be found at the LHC@home message board.
[2025-11-22 19:02:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:02:42] Checking for apptainer binary...
[2025-11-22 19:02:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 19:02:42] Running /usr/bin/apptainer --version
[2025-11-22 19:02:42] apptainer version 1.3.2-1.el7
[2025-11-22 19:02:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:02:44] c-204-37.aglt2.org
[2025-11-22 19:02:44] apptainer works
[2025-11-22 19:02:44] Set ATHENA_PROC_NUMBER=8
[2025-11-22 19:02:44] Set ATHENA_CORE_NUMBER=8
[2025-11-22 19:02:44] Starting ATLAS job with PandaID=6895333990
[2025-11-22 19:02:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:09:31 (28205): wrapper (7.7.26015): starting
23:09:31 (28205): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:09:31] Arguments: --nthreads 8
[2025-11-22 23:09:31] Threads: 8
[2025-11-22 23:09:31] This job has been restarted, cleaning up previous attempt
[2025-11-22 23:09:31] Checking for CVMFS
[2025-11-22 23:09:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:09:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:09:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:09:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:09:31] 2.11.2.0 2822 68480 84972 153195 2 57 13061217 20275201 1 130560 0 19093792 99.861 4068397 31620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 23:09:31] CVMFS is ok
[2025-11-22 23:09:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:09:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:09:31] Further information can be found at the LHC@home message board.
[2025-11-22 23:09:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:09:31] Checking for apptainer binary...
[2025-11-22 23:09:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:09:31] Running /usr/bin/apptainer --version
[2025-11-22 23:09:31] apptainer version 1.3.2-1.el7
[2025-11-22 23:09:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:09:33] c-204-37.aglt2.org
[2025-11-22 23:09:33] apptainer works
[2025-11-22 23:09:33] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:09:33] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:09:33] Starting ATLAS job with PandaID=6895333990
[2025-11-22 23:09:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:45:13]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:45:13] 2025-11-23 16:44:33,820 | INFO     | monitor loop #3294: job 0:6895333990 is in state 'finished'
[2025-11-23 11:45:13] 2025-11-23 16:44:34,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,327 | INFO     | time since job start (45285s) is within the limit (172800.0s)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,348 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 11:45:13] 2025-11-23 16:44:36,351 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 11:45:13] 2025-11-23 16:44:36,353 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333990/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,354 | INFO     | extracted standard info from prmon json
[2025-11-23 11:45:13] 2025-11-23 16:44:36,355 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:45:13] 2025-11-23 16:44:36,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:45:13] 2025-11-23 16:44:36,368 | INFO     | fitting pss+swap vs Time
[2025-11-23 11:45:13] 2025-11-23 16:44:36,369 | INFO     | sum of square deviations: 126674446239.9151
[2025-11-23 11:45:13] 2025-11-23 16:44:36,381 | INFO     | sum of deviations: 850612115513.839
[2025-11-23 11:45:13] 2025-11-23 16:44:36,381 | INFO     | mean x: 1763893625.1603773
[2025-11-23 11:45:13] 2025-11-23 16:44:36,381 | INFO     | mean y: 2872345.4299191376
[2025-11-23 11:45:13] 2025-11-23 16:44:36,381 | INFO     | intersect: -11841578785.600727
[2025-11-23 11:45:13] 2025-11-23 16:44:36,382 | INFO     | chi2: 6.566716669596866
[2025-11-23 11:45:13] 2025-11-23 16:44:36,383 | INFO     | sum of square deviations: 124131003810.21974
[2025-11-23 11:45:13] 2025-11-23 16:44:36,394 | INFO     | sum of deviations: 1121037946927.7043
[2025-11-23 11:45:13] 2025-11-23 16:44:36,394 | INFO     | mean x: 1763893472.6648576
[2025-11-23 11:45:13] 2025-11-23 16:44:36,394 | INFO     | mean y: 2888561.278154681
[2025-11-23 11:45:13] 2025-11-23 16:44:36,394 | INFO     | intersect: -15926987589.716053
[2025-11-23 11:45:13] 2025-11-23 16:44:36,395 | INFO     | chi2: 2.897537585515625
[2025-11-23 11:45:13] 2025-11-23 16:44:36,395 | INFO     | current chi2=2.897537585515625 (change=55.87539814332349 %)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,396 | INFO     | sum of square deviations: 121621841092.99437
[2025-11-23 11:45:13] 2025-11-23 16:44:36,407 | INFO     | sum of deviations: 1179298842040.8186
[2025-11-23 11:45:13] 2025-11-23 16:44:36,407 | INFO     | mean x: 1763893320.169399
[2025-11-23 11:45:13] 2025-11-23 16:44:36,407 | INFO     | mean y: 2892093.3401639345
[2025-11-23 11:45:13] 2025-11-23 16:44:36,407 | INFO     | intersect: -17100593031.250076
[2025-11-23 11:45:13] 2025-11-23 16:44:36,408 | INFO     | chi2: 2.5679487829531764
[2025-11-23 11:45:13] 2025-11-23 16:44:36,408 | INFO     | current chi2=2.5679487829531764 (change=11.37478955268832 %)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,408 | INFO     | right removable region: 731
[2025-11-23 11:45:13] 2025-11-23 16:44:36,409 | INFO     | sum of square deviations: 124130704910.21965
[2025-11-23 11:45:13] 2025-11-23 16:44:36,420 | INFO     | sum of deviations: 648252853083.9567
[2025-11-23 11:45:13] 2025-11-23 16:44:36,420 | INFO     | mean x: 1763893777.6648576
[2025-11-23 11:45:13] 2025-11-23 16:44:36,420 | INFO     | mean y: 2884455.9674355495
[2025-11-23 11:45:13] 2025-11-23 16:44:36,420 | INFO     | intersect: -9208770103.920126
[2025-11-23 11:45:13] 2025-11-23 16:44:36,421 | INFO     | chi2: 4.286555540055241
[2025-11-23 11:45:13] 2025-11-23 16:44:36,421 | INFO     | current chi2=4.286555540055241 (change=34.72300152827524 %)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,422 | INFO     | sum of square deviations: 121621288250.33208
[2025-11-23 11:45:13] 2025-11-23 16:44:36,433 | INFO     | sum of deviations: 592166412570.3228
[2025-11-23 11:45:13] 2025-11-23 16:44:36,433 | INFO     | mean x: 1763893930.168033
[2025-11-23 11:45:13] 2025-11-23 16:44:36,433 | INFO     | mean y: 2887864.176229508
[2025-11-23 11:45:13] 2025-11-23 16:44:36,433 | INFO     | intersect: -8585400878.763635
[2025-11-23 11:45:13] 2025-11-23 16:44:36,434 | INFO     | chi2: 4.201944024290816
[2025-11-23 11:45:13] 2025-11-23 16:44:36,434 | INFO     | current chi2=4.201944024290816 (change=1.973881242731669 %)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,434 | INFO     | left removable region: 20
[2025-11-23 11:45:13] 2025-11-23 16:44:36,435 | INFO     | sum of square deviations: 111451556245.59776
[2025-11-23 11:45:13] 2025-11-23 16:44:36,446 | INFO     | sum of deviations: 838205101817.7786
[2025-11-23 11:45:13] 2025-11-23 16:44:36,446 | INFO     | mean x: 1763893899.676512
[2025-11-23 11:45:13] 2025-11-23 16:44:36,446 | INFO     | mean y: 2912999.5077355835
[2025-11-23 11:45:13] 2025-11-23 16:44:36,446 | INFO     | intersect: -13262984001.661406
[2025-11-23 11:45:13] 2025-11-23 16:44:36,447 | INFO     | chi2: 0.12227233836993992
[2025-11-23 11:45:13] 2025-11-23 16:44:36,447 | INFO     | current memory leak: 7.52 B/s (using 711 data points, chi2=0.12)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,447 | INFO     | could have reported an average CPU frequency of 2184 MHz (28 samples)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | ..............................
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . Timing measurements:
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . get job = 0 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . initial setup = 2 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . payload setup = 9 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . stage-in = 0 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . payload execution = 45236 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,448 | INFO     | . stage-out = 3 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,449 | INFO     | . log creation = 0 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,449 | INFO     | ..............................
[2025-11-23 11:45:13] 2025-11-23 16:44:36,723 | INFO     | 
[2025-11-23 11:45:13] 2025-11-23 16:44:36,724 | INFO     | job summary report
[2025-11-23 11:45:13] 2025-11-23 16:44:36,724 | INFO     | --------------------------------------------------
[2025-11-23 11:45:13] 2025-11-23 16:44:36,724 | INFO     | PanDA job id: 6895333990
[2025-11-23 11:45:13] 2025-11-23 16:44:36,724 | INFO     | task id: 47556137
[2025-11-23 11:45:13] 2025-11-23 16:44:36,724 | INFO     | errors: (none)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | pilot state: finished 
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | transexitcode: 0
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | exeerrorcode: 0
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | exeerrordiag: 
[2025-11-23 11:45:13] 2025-11-23 16:44:36,725 | INFO     | exitcode: 0
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | exitmsg: OK
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | cpuconsumptiontime: 351841 s
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | nevents: 1000
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | neventsw: 0
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | pid: 7199
[2025-11-23 11:45:13] 2025-11-23 16:44:36,726 | INFO     | pgrp: 7199
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | corecount: 8
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | event service: False
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | sizes: {0: 2298756, 6: 2299018, 11: 2299046, 45249: 2345000, 45250: 2345027, 45254: 2354077, 45256: 2354261, 45268: 2354507}
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | --------------------------------------------------
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | 
[2025-11-23 11:45:13] 2025-11-23 16:44:36,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 11:45:13] 2025-11-23 16:44:36,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:45:13] 2025-11-23 16:44:36,759 | INFO     | job 6895333990 has completed (purged errors)
[2025-11-23 11:45:13] 2025-11-23 16:44:36,760 | INFO     | overall cleanup function is called
[2025-11-23 11:45:13] 2025-11-23 16:44:37,775 | INFO     | --- collectZombieJob: --- 10, [7199]
[2025-11-23 11:45:13] 2025-11-23 16:44:37,775 | INFO     | zombie collector waiting for pid 7199
[2025-11-23 11:45:13] 2025-11-23 16:44:37,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:45:13] 2025-11-23 16:44:37,775 | INFO     | collected zombie processes
[2025-11-23 11:45:13] 2025-11-23 16:44:37,775 | INFO     | will attempt to kill all subprocesses of pid=7199
[2025-11-23 11:45:13] 2025-11-23 16:44:37,865 | INFO     | process IDs to be killed: [7199] (in reverse order)
[2025-11-23 11:45:13] 2025-11-23 16:44:37,924 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:45:13] 2025-11-23 16:44:37,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:45:13] 2025-11-23 16:44:37,928 | INFO     | did not find any defunct processes belonging to 7199
[2025-11-23 11:45:13] 2025-11-23 16:44:37,931 | INFO     | did not find any defunct processes belonging to 7199
[2025-11-23 11:45:13] 2025-11-23 16:44:37,934 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:45:13] 2025-11-23 16:44:37,934 | INFO     | ready for new job
[2025-11-23 11:45:13] 2025-11-23 16:44:37,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:45:13] 2025-11-23 16:44:37,938 | INFO     | ***************************************
[2025-11-23 11:45:13] 2025-11-23 16:44:37,939 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:45:13] 2025-11-23 16:44:37,939 | INFO     | ***************************************
[2025-11-23 11:45:13] 2025-11-23 16:44:37,939 | INFO     | 
[2025-11-23 11:45:13] 2025-11-23 16:44:37,939 | INFO     | architecture information:
[2025-11-23 11:45:13] 2025-11-23 16:44:37,940 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:45:13] 2025-11-23 16:44:37,959 | INFO     | cat /etc/os-release:
[2025-11-23 11:45:13] NAME="CentOS Linux"
[2025-11-23 11:45:13] VERSION="7 (Core)"
[2025-11-23 11:45:13] ID="centos"
[2025-11-23 11:45:13] ID_LIKE="rhel fedora"
[2025-11-23 11:45:13] VERSION_ID="7"
[2025-11-23 11:45:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:45:13] ANSI_COLOR="0;31"
[2025-11-23 11:45:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:45:13] HOME_URL="https://www.centos.org/"
[2025-11-23 11:45:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:45:13] 
[2025-11-23 11:45:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:45:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:45:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:45:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:45:13] 
[2025-11-23 11:45:13] 2025-11-23 16:44:37,959 | INFO     | ***************************************
[2025-11-23 11:45:13] 2025-11-23 16:44:38,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 11:45:13] 2025-11-23 16:44:38,481 | INFO     | sufficient remaining disk space (17426284544 B)
[2025-11-23 11:45:13] 2025-11-23 16:44:38,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:45:13] 2025-11-23 16:44:38,482 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:45:13] 2025-11-23 16:44:38,482 | INFO     | update_server=False
[2025-11-23 11:45:13] 2025-11-23 16:44:38,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:45:13] 2025-11-23 16:44:38,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:45:13] 2025-11-23 16:44:38,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:45:13] 2025-11-23 16:44:38,483 | INFO     | aborting loop
[2025-11-23 11:45:13] 2025-11-23 16:44:38,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:45:13] 2025-11-23 16:44:38,703 | INFO     | all data control threads have been joined
[2025-11-23 11:45:13] 2025-11-23 16:44:39,488 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:39,488 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:39,489 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:39,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:45:13] 2025-11-23 16:44:39,709 | INFO     | [data] control thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:39,723 | INFO     | all job control threads have been joined
[2025-11-23 11:45:13] 2025-11-23 16:44:39,777 | INFO     | all payload control threads have been joined
[2025-11-23 11:45:13] 2025-11-23 16:44:40,304 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,306 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,341 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,559 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,728 | INFO     | [job] control thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,753 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,782 | INFO     | [payload] control thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,891 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,904 | INFO     | [job] validate thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:40,936 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:43,578 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:44:49,117 | INFO     | job.realtimelogging is not enabled
[2025-11-23 11:45:13] 2025-11-23 16:44:50,900 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:45:13] 2025-11-23 16:45:05,914 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:45:13] 2025-11-23 16:45:07,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691450722112)>', '<ExcThread(monitor, started 140690528900864)>']
[2025-11-23 11:45:13] 2025-11-23 16:45:09,544 | INFO     | PID=32649 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 11:45:13] 2025-11-23 16:45:09,544 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:45:13] 2025-11-23 16:45:09,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:45:13] 2025-11-23 16:45:09,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:45:13] 2025-11-23 16:45:09,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:45:13] 2025-11-23 16:45:09,545 | INFO     | [monitor] control thread has ended
[2025-11-23 11:45:13] 2025-11-23 16:45:12,688 | INFO     | all workflow threads have been joined
[2025-11-23 11:45:13] 2025-11-23 16:45:12,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:45:13] 2025-11-23 16:45:13,458 | INFO     | traces error code: 0
[2025-11-23 11:45:13] 2025-11-23 16:45:13,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:45:13] 2025-11-23 16:45:13,578 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:45:13] 2025-11-23 16:45:13,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:45:13] 2025-11-23 16:45:13,587 [wrapper] pilotpid: 32649
[2025-11-23 11:45:13] 2025-11-23 16:45:13,592 [wrapper] Pilot exit status: 0
[2025-11-23 11:45:13] 2025-11-23 16:45:13,608 [wrapper] pandaids: 6895333990 6895333990
[2025-11-23 11:45:13] 2025-11-23 16:45:13,658 [wrapper] cleanup supervisor_pilot 21514 32650
[2025-11-23 11:45:13] 2025-11-23 16:45:13,663 [wrapper] Test setup, not cleaning
[2025-11-23 11:45:13] 2025-11-23 16:45:13,667 [wrapper] apfmon messages muted
[2025-11-23 11:45:13] 2025-11-23 16:45:13,672 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:45:13] 2025-11-23 16:45:13,677 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:45:13]  *** Error codes and diagnostics ***
[2025-11-23 11:45:13]     "exeErrorCode": 0,
[2025-11-23 11:45:13]     "exeErrorDiag": "",
[2025-11-23 11:45:13]     "pilotErrorCode": 0,
[2025-11-23 11:45:13]     "pilotErrorDiag": "",
[2025-11-23 11:45:13]  *** Listing of results directory ***
[2025-11-23 11:45:13] total 1721152
[2025-11-23 11:45:13] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 21:10 pilot3.tar.gz
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 21:12 queuedata.json
[2025-11-23 11:45:13] -rwx------ 1 boincer umatlas     36292 Nov 21 21:13 runpilot2-wrapper.sh
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas       100 Nov 22 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:45:13] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 19:02 run_atlas
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas       105 Nov 22 19:02 job.xml
[2025-11-23 11:45:13] -rw-r--r-- 3 boincer umatlas 409523283 Nov 22 19:02 EVNT.47483658._000217.pool.root.1
[2025-11-23 11:45:13] -rw-r--r-- 3 boincer umatlas 409523283 Nov 22 19:02 ATLAS.root_0
[2025-11-23 11:45:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:02 start_atlas.sh
[2025-11-23 11:45:13] drwxrwx--x 2 boincer umatlas      4096 Nov 22 19:02 shared
[2025-11-23 11:45:13] -rw-r--r-- 2 boincer umatlas    590095 Nov 22 19:02 input.tar.gz
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas         0 Nov 22 19:02 boinc_lockfile
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 23:09 pandaJob.out
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas        57 Nov 22 23:09 setup.sh.local
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas    989784 Nov 22 23:09 agis_schedconf.cvmfs.json
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas       533 Nov 23 11:34 boinc_task_state.xml
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 11:40 init_data.xml
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas 923099700 Nov 23 11:43 HITS.47556137._002138.pool.root.1
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas      1062 Nov 23 11:44 memory_monitor_summary.json
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas   1526164 Nov 23 11:44 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas   1994613 Nov 23 11:44 log.47556137._002138.job.log.tgz.1
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas        96 Nov 23 11:44 pilot_heartbeat.json
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas      8653 Nov 23 11:44 heartbeat.json
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 11:44 boinc_mmap_file
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas        29 Nov 23 11:44 wrapper_checkpoint.txt
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas      4818 Nov 23 11:45 pilotlog.txt
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas   6199450 Nov 23 11:45 log.47556137._002138.job.log.1
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas       353 Nov 23 11:45 output.list
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas       620 Nov 23 11:45 runtime_log
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas   8212480 Nov 23 11:45 result.tar.gz
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas      9428 Nov 23 11:45 runtime_log.err
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas       793 Nov 23 11:45 d67KDmAJsg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDsJKDmQ7892n.diag
[2025-11-23 11:45:13] -rw-r--r-- 1 boincer umatlas     23432 Nov 23 11:45 stderr.txt
[2025-11-23 11:45:13] HITS file was successfully produced:
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas 923099700 Nov 23 11:43 shared/HITS.pool.root.1
[2025-11-23 11:45:13]  *** Contents of shared directory: ***
[2025-11-23 11:45:13] total 1310016
[2025-11-23 11:45:13] -rw-r--r-- 3 boincer umatlas 409523283 Nov 22 19:02 ATLAS.root_0
[2025-11-23 11:45:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 19:02 start_atlas.sh
[2025-11-23 11:45:13] -rw-r--r-- 2 boincer umatlas    590095 Nov 22 19:02 input.tar.gz
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas 923099700 Nov 23 11:43 HITS.pool.root.1
[2025-11-23 11:45:13] -rw------- 1 boincer umatlas   8212480 Nov 23 11:45 result.tar.gz
11:45:15 (28205): run_atlas exited; CPU time 348877.016957
11:45:15 (28205): called boinc_finish(0)

</stderr_txt>
]]>

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