Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:59:12 (10467): wrapper (7.7.26015): starting
18:59:12 (10467): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 18:59:12] Arguments: --nthreads 8
[2025-11-22 18:59:12] Threads: 8
[2025-11-22 18:59:12] Checking for CVMFS
[2025-11-22 18:59:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:59:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:59:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:59:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:59:13] 2.11.2.0 2888 43795 81192 153190 2 82 10947971 20275201 1 130560 0 7346724 99.744 2546481 29035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:59:13] CVMFS is ok
[2025-11-22 18:59:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:59:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:59:13] Further information can be found at the LHC@home message board.
[2025-11-22 18:59:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:59:13] Checking for apptainer binary...
[2025-11-22 18:59:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:59:13] Running /usr/bin/apptainer --version
[2025-11-22 18:59:13] apptainer version 1.3.2-1.el7
[2025-11-22 18:59:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:59:15] c-204-6.aglt2.org
[2025-11-22 18:59:15] apptainer works
[2025-11-22 18:59:15] Set ATHENA_PROC_NUMBER=8
[2025-11-22 18:59:15] Set ATHENA_CORE_NUMBER=8
[2025-11-22 18:59:15] Starting ATLAS job with PandaID=6895333841
[2025-11-22 18:59:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:37:07]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:37:07] 2025-11-23 12:36:31,640 | INFO     | time since job start (45418s) is within the limit (172800.0s)
[2025-11-23 07:37:07] 2025-11-23 12:36:33,114 | INFO     | monitor loop #3336: job 0:6895333841 is in state 'finished'
[2025-11-23 07:37:07] 2025-11-23 12:36:33,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:37:07] 2025-11-23 12:36:33,645 | INFO     | time since job start (45420s) is within the limit (172800.0s)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,639 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 07:37:07] 2025-11-23 12:36:34,643 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-23 07:37:07] 2025-11-23 12:36:34,646 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333841/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,647 | INFO     | extracted standard info from prmon json
[2025-11-23 07:37:07] 2025-11-23 12:36:34,647 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:37:07] 2025-11-23 12:36:34,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:37:07] 2025-11-23 12:36:34,661 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:37:07] 2025-11-23 12:36:34,663 | INFO     | sum of square deviations: 127702215689.9664
[2025-11-23 07:37:07] 2025-11-23 12:36:34,674 | INFO     | sum of deviations: 852159225403.6049
[2025-11-23 07:37:07] 2025-11-23 12:36:34,674 | INFO     | mean x: 1763878668.1599462
[2025-11-23 07:37:07] 2025-11-23 12:36:34,674 | INFO     | mean y: 3222096.0873655914
[2025-11-23 07:37:07] 2025-11-23 12:36:34,674 | INFO     | intersect: -11767172579.086788
[2025-11-23 07:37:07] 2025-11-23 12:36:34,675 | INFO     | chi2: 6.206290430297564
[2025-11-23 07:37:07] 2025-11-23 12:36:34,676 | INFO     | sum of square deviations: 125144996562.77379
[2025-11-23 07:37:07] 2025-11-23 12:36:34,688 | INFO     | sum of deviations: 1120268230469.0625
[2025-11-23 07:37:07] 2025-11-23 12:36:34,688 | INFO     | mean x: 1763878515.6644113
[2025-11-23 07:37:07] 2025-11-23 12:36:34,688 | INFO     | mean y: 3238079.238159675
[2025-11-23 07:37:07] 2025-11-23 12:36:34,689 | INFO     | intersect: -15786582670.923273
[2025-11-23 07:37:07] 2025-11-23 12:36:34,689 | INFO     | chi2: 3.2417727899660487
[2025-11-23 07:37:07] 2025-11-23 12:36:34,689 | INFO     | current chi2=3.2417727899660487 (change=47.76633761545349 %)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,690 | INFO     | sum of square deviations: 122622150173.05179
[2025-11-23 07:37:07] 2025-11-23 12:36:34,701 | INFO     | sum of deviations: 1225424651469.3577
[2025-11-23 07:37:07] 2025-11-23 12:36:34,702 | INFO     | mean x: 1763878363.1689374
[2025-11-23 07:37:07] 2025-11-23 12:36:34,702 | INFO     | mean y: 3244425.585831063
[2025-11-23 07:37:07] 2025-11-23 12:36:34,702 | INFO     | intersect: -17624076783.26752
[2025-11-23 07:37:07] 2025-11-23 12:36:34,703 | INFO     | chi2: 2.6355200104191865
[2025-11-23 07:37:07] 2025-11-23 12:36:34,703 | INFO     | current chi2=2.6355200104191865 (change=18.701273001714952 %)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,703 | INFO     | right removable region: 733
[2025-11-23 07:37:07] 2025-11-23 12:36:34,704 | INFO     | sum of square deviations: 125144697052.77391
[2025-11-23 07:37:07] 2025-11-23 12:36:34,715 | INFO     | sum of deviations: 616284136755.3662
[2025-11-23 07:37:07] 2025-11-23 12:36:34,715 | INFO     | mean x: 1763878820.6644113
[2025-11-23 07:37:07] 2025-11-23 12:36:34,716 | INFO     | mean y: 3236137.8200270636
[2025-11-23 07:37:07] 2025-11-23 12:36:34,716 | INFO     | intersect: -8683113039.850903
[2025-11-23 07:37:07] 2025-11-23 12:36:34,717 | INFO     | chi2: 3.774770956517386
[2025-11-23 07:37:07] 2025-11-23 12:36:34,717 | INFO     | current chi2=3.774770956517386 (change=39.1783062859918 %)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,718 | INFO     | sum of square deviations: 122621551153.05179
[2025-11-23 07:37:07] 2025-11-23 12:36:34,729 | INFO     | sum of deviations: 568388956227.9486
[2025-11-23 07:37:07] 2025-11-23 12:36:34,729 | INFO     | mean x: 1763878973.1689374
[2025-11-23 07:37:07] 2025-11-23 12:36:34,729 | INFO     | mean y: 3239031.3310626703
[2025-11-23 07:37:07] 2025-11-23 12:36:34,730 | INFO     | intersect: -8172887587.884082
[2025-11-23 07:37:07] 2025-11-23 12:36:34,730 | INFO     | chi2: 3.730939984015087
[2025-11-23 07:37:07] 2025-11-23 12:36:34,731 | INFO     | current chi2=3.730939984015087 (change=1.16115581600049 %)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,731 | INFO     | left removable region: 20
[2025-11-23 07:37:07] 2025-11-23 12:36:34,732 | INFO     | sum of square deviations: 112395187813.62697
[2025-11-23 07:37:07] 2025-11-23 12:36:34,742 | INFO     | sum of deviations: 870660265389.1549
[2025-11-23 07:37:07] 2025-11-23 12:36:34,743 | INFO     | mean x: 1763878942.6858344
[2025-11-23 07:37:07] 2025-11-23 12:36:34,743 | INFO     | mean y: 3266611.1837307154
[2025-11-23 07:37:07] 2025-11-23 12:36:34,743 | INFO     | intersect: -13660479481.751709
[2025-11-23 07:37:07] 2025-11-23 12:36:34,744 | INFO     | chi2: 0.09922682412116421
[2025-11-23 07:37:07] 2025-11-23 12:36:34,744 | INFO     | current memory leak: 7.75 B/s (using 713 data points, chi2=0.10)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,744 | INFO     | could have reported an average CPU frequency of 2179 MHz (28 samples)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,744 | INFO     | ..............................
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . Timing measurements:
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . get job = 0 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . initial setup = 2 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . payload setup = 9 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . stage-in = 0 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . payload execution = 45379 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . stage-out = 3 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | . log creation = 0 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,745 | INFO     | ..............................
[2025-11-23 07:37:07] 2025-11-23 12:36:34,840 | INFO     | 
[2025-11-23 07:37:07] 2025-11-23 12:36:34,841 | INFO     | job summary report
[2025-11-23 07:37:07] 2025-11-23 12:36:34,841 | INFO     | --------------------------------------------------
[2025-11-23 07:37:07] 2025-11-23 12:36:34,841 | INFO     | PanDA job id: 6895333841
[2025-11-23 07:37:07] 2025-11-23 12:36:34,841 | INFO     | task id: 47556137
[2025-11-23 07:37:07] 2025-11-23 12:36:34,841 | INFO     | errors: (none)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | pilot state: finished 
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | transexitcode: 0
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | exeerrorcode: 0
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | exeerrordiag: 
[2025-11-23 07:37:07] 2025-11-23 12:36:34,842 | INFO     | exitcode: 0
[2025-11-23 07:37:07] 2025-11-23 12:36:34,843 | INFO     | exitmsg: OK
[2025-11-23 07:37:07] 2025-11-23 12:36:34,843 | INFO     | cpuconsumptiontime: 352110 s
[2025-11-23 07:37:07] 2025-11-23 12:36:34,843 | INFO     | nevents: 1000
[2025-11-23 07:37:07] 2025-11-23 12:36:34,843 | INFO     | neventsw: 0
[2025-11-23 07:37:07] 2025-11-23 12:36:34,843 | INFO     | pid: 21604
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | pgrp: 21604
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | corecount: 8
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | event service: False
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | sizes: {0: 2298585, 1: 2298784, 7: 2299046, 11: 2299074, 45392: 2345139, 45397: 2354317, 45404: 2354507}
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | --------------------------------------------------
[2025-11-23 07:37:07] 2025-11-23 12:36:34,844 | INFO     | 
[2025-11-23 07:37:07] 2025-11-23 12:36:34,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 07:37:07] 2025-11-23 12:36:34,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,878 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:37:07] 2025-11-23 12:36:34,882 | INFO     | job 6895333841 has completed (purged errors)
[2025-11-23 07:37:07] 2025-11-23 12:36:34,882 | INFO     | overall cleanup function is called
[2025-11-23 07:37:07] 2025-11-23 12:36:35,898 | INFO     | --- collectZombieJob: --- 10, [21604]
[2025-11-23 07:37:07] 2025-11-23 12:36:35,898 | INFO     | zombie collector waiting for pid 21604
[2025-11-23 07:37:07] 2025-11-23 12:36:35,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:37:07] 2025-11-23 12:36:35,899 | INFO     | collected zombie processes
[2025-11-23 07:37:07] 2025-11-23 12:36:35,899 | INFO     | will attempt to kill all subprocesses of pid=21604
[2025-11-23 07:37:07] 2025-11-23 12:36:35,992 | INFO     | process IDs to be killed: [21604] (in reverse order)
[2025-11-23 07:37:07] 2025-11-23 12:36:36,051 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:37:07] 2025-11-23 12:36:36,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:37:07] 2025-11-23 12:36:36,055 | INFO     | did not find any defunct processes belonging to 21604
[2025-11-23 07:37:07] 2025-11-23 12:36:36,059 | INFO     | did not find any defunct processes belonging to 21604
[2025-11-23 07:37:07] 2025-11-23 12:36:36,061 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:37:07] 2025-11-23 12:36:36,061 | INFO     | ready for new job
[2025-11-23 07:37:07] 2025-11-23 12:36:36,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:37:07] 2025-11-23 12:36:36,065 | INFO     | ***************************************
[2025-11-23 07:37:07] 2025-11-23 12:36:36,065 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:37:07] 2025-11-23 12:36:36,065 | INFO     | ***************************************
[2025-11-23 07:37:07] 2025-11-23 12:36:36,065 | INFO     | 
[2025-11-23 07:37:07] 2025-11-23 12:36:36,066 | INFO     | architecture information:
[2025-11-23 07:37:07] 2025-11-23 12:36:36,067 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:37:07] 2025-11-23 12:36:36,086 | INFO     | cat /etc/os-release:
[2025-11-23 07:37:07] NAME="CentOS Linux"
[2025-11-23 07:37:07] VERSION="7 (Core)"
[2025-11-23 07:37:07] ID="centos"
[2025-11-23 07:37:07] ID_LIKE="rhel fedora"
[2025-11-23 07:37:07] VERSION_ID="7"
[2025-11-23 07:37:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:37:07] ANSI_COLOR="0;31"
[2025-11-23 07:37:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:37:07] HOME_URL="https://www.centos.org/"
[2025-11-23 07:37:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:37:07] 
[2025-11-23 07:37:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:37:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:37:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:37:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:37:07] 
[2025-11-23 07:37:07] 2025-11-23 12:36:36,086 | INFO     | ***************************************
[2025-11-23 07:37:07] 2025-11-23 12:36:36,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 07:37:07] 2025-11-23 12:36:36,611 | INFO     | sufficient remaining disk space (17458790400 B)
[2025-11-23 07:37:07] 2025-11-23 12:36:36,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:37:07] 2025-11-23 12:36:36,611 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:37:07] 2025-11-23 12:36:36,611 | INFO     | update_server=False
[2025-11-23 07:37:07] 2025-11-23 12:36:36,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:37:07] 2025-11-23 12:36:36,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:37:07] 2025-11-23 12:36:36,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:37:07] 2025-11-23 12:36:36,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:37:07] 2025-11-23 12:36:36,623 | INFO     | aborting loop
[2025-11-23 07:37:07] 2025-11-23 12:36:36,699 | INFO     | all data control threads have been joined
[2025-11-23 07:37:07] 2025-11-23 12:36:37,436 | INFO     | all payload control threads have been joined
[2025-11-23 07:37:07] 2025-11-23 12:36:37,582 | INFO     | all job control threads have been joined
[2025-11-23 07:37:07] 2025-11-23 12:36:37,617 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,618 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,629 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,704 | INFO     | [data] control thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,720 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,860 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,866 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:37,930 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,367 | INFO     | [job] validate thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,439 | INFO     | [payload] control thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,584 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,587 | INFO     | [job] control thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,618 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:38,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:37:07] 2025-11-23 12:36:39,099 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:42,660 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:37:07] 2025-11-23 12:36:48,606 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:37:07] 2025-11-23 12:36:49,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139474503488)>', '<ExcThread(monitor, started 140138566887168)>']
[2025-11-23 07:37:07] 2025-11-23 12:36:54,421 | INFO     | all workflow threads have been joined
[2025-11-23 07:37:07] 2025-11-23 12:36:54,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:37:07] 2025-11-23 12:36:54,422 | INFO     | traces error code: 0
[2025-11-23 07:37:07] 2025-11-23 12:36:54,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:37:07] 2025-11-23 12:37:06,784 | INFO     | PID=14230 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 07:37:07] 2025-11-23 12:37:06,785 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:37:07] 2025-11-23 12:37:06,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:37:07] 2025-11-23 12:37:06,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:37:07] 2025-11-23 12:37:06,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:37:07] 2025-11-23 12:37:06,785 | INFO     | [monitor] control thread has ended
[2025-11-23 07:37:07] 2025-11-23 12:37:06,890 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:37:07] 2025-11-23 12:37:06,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:37:07] 2025-11-23 12:37:06,900 [wrapper] pilotpid: 14230
[2025-11-23 07:37:07] 2025-11-23 12:37:06,906 [wrapper] Pilot exit status: 0
[2025-11-23 07:37:07] 2025-11-23 12:37:06,925 [wrapper] pandaids: 6895333841
[2025-11-23 07:37:07] 2025-11-23 12:37:06,971 [wrapper] cleanup supervisor_pilot 22401 14231
[2025-11-23 07:37:07] 2025-11-23 12:37:06,976 [wrapper] Test setup, not cleaning
[2025-11-23 07:37:07] 2025-11-23 12:37:06,981 [wrapper] apfmon messages muted
[2025-11-23 07:37:07] 2025-11-23 12:37:06,986 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:37:07] 2025-11-23 12:37:06,991 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:37:07]  *** Error codes and diagnostics ***
[2025-11-23 07:37:07]     "exeErrorCode": 0,
[2025-11-23 07:37:07]     "exeErrorDiag": "",
[2025-11-23 07:37:07]     "pilotErrorCode": 0,
[2025-11-23 07:37:07]     "pilotErrorDiag": "",
[2025-11-23 07:37:07]  *** Listing of results directory ***
[2025-11-23 07:37:07] total 1326984
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-11-23 07:37:07] -rwx------ 1 boincer umatlas     36292 Nov 21 21:01 runpilot2-wrapper.sh
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 21:01 queuedata.json
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas       100 Nov 22 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:37:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 18:59 run_atlas
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas       105 Nov 22 18:59 job.xml
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas 408666363 Nov 22 18:59 EVNT.47483658._000212.pool.root.1
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:59 start_atlas.sh
[2025-11-23 07:37:07] drwxrwx--x 2 boincer umatlas      4096 Nov 22 18:59 shared
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 18:59 input.tar.gz
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas         0 Nov 22 18:59 boinc_lockfile
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 18:59 pandaJob.out
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas        57 Nov 22 18:59 setup.sh.local
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas    989784 Nov 22 18:59 agis_schedconf.cvmfs.json
[2025-11-23 07:37:07] drwx------ 5 boincer umatlas      4096 Nov 22 18:59 pilot3
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas       533 Nov 23 07:25 boinc_task_state.xml
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas      5911 Nov 23 07:31 init_data.xml
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas 929778841 Nov 23 07:35 HITS.47556137._002090.pool.root.1
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas      1062 Nov 23 07:36 memory_monitor_summary.json
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas   1526164 Nov 23 07:36 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas   1978249 Nov 23 07:36 log.47556137._002090.job.log.tgz.1
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas      8656 Nov 23 07:36 heartbeat.json
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 07:37 boinc_mmap_file
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas        29 Nov 23 07:37 wrapper_checkpoint.txt
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas        95 Nov 23 07:37 pilot_heartbeat.json
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas       745 Nov 23 07:37 pilotlog.txt
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas   6250786 Nov 23 07:37 log.47556137._002090.job.log.1
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas       353 Nov 23 07:37 output.list
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas       620 Nov 23 07:37 runtime_log
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas   8253440 Nov 23 07:37 result.tar.gz
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 07:37 runtime_log.err
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas       667 Nov 23 07:37 9MCODmw7rg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmptHKDm8YK8em.diag
[2025-11-23 07:37:07] -rw-r--r-- 1 boincer umatlas     21297 Nov 23 07:37 stderr.txt
[2025-11-23 07:37:07] HITS file was successfully produced:
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas 929778841 Nov 23 07:35 shared/HITS.pool.root.1
[2025-11-23 07:37:07]  *** Contents of shared directory: ***
[2025-11-23 07:37:07] total 1315744
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas 408666363 Nov 22 18:59 ATLAS.root_0
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:59 start_atlas.sh
[2025-11-23 07:37:07] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 18:59 input.tar.gz
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas 929778841 Nov 23 07:35 HITS.pool.root.1
[2025-11-23 07:37:07] -rw------- 1 boincer umatlas   8253440 Nov 23 07:37 result.tar.gz
07:37:08 (10467): run_atlas exited; CPU time 349734.605476
07:37:08 (10467): called boinc_finish(0)

</stderr_txt>
]]>

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