Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:47 (29048): wrapper (7.7.26015): starting
18:43:47 (29048): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 18:43:47] Arguments: --nthreads 8
[2025-11-22 18:43:47] Threads: 8
[2025-11-22 18:43:47] Checking for CVMFS
[2025-11-22 18:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:43:48] 2.11.2.0 14221 112583 134076 153190 2 82 9494162 18432000 1885 130560 0 82420327 99.974 4713701 30525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:43:48] CVMFS is ok
[2025-11-22 18:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:43:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:43:48] Further information can be found at the LHC@home message board.
[2025-11-22 18:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:43:48] Checking for apptainer binary...
[2025-11-22 18:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:43:48] Running /usr/bin/apptainer --version
[2025-11-22 18:43:48] apptainer version 1.3.2-1.el7
[2025-11-22 18:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:43:49] c-206-9.aglt2.org
[2025-11-22 18:43:49] apptainer works
[2025-11-22 18:43:49] Set ATHENA_PROC_NUMBER=8
[2025-11-22 18:43:49] Set ATHENA_CORE_NUMBER=8
[2025-11-22 18:43:49] Starting ATLAS job with PandaID=6895333627
[2025-11-22 18:43:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 13:57:12]  *** The last 200 lines of the pilot log: ***
[2025-11-23 13:57:12] 2025-11-23 18:56:37,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,528 | INFO     | time since job start (69158s) is within the limit (172800.0s)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,528 | INFO     | 69160s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 13:57:12] 2025-11-23 18:56:38,740 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 13:57:12] 2025-11-23 18:56:38,743 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2494.5833333333335
[2025-11-23 13:57:12] 2025-11-23 18:56:38,746 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895333627/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,746 | INFO     | extracted standard info from prmon json
[2025-11-23 13:57:12] 2025-11-23 18:56:38,747 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 13:57:12] 2025-11-23 18:56:38,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 13:57:12] 2025-11-23 18:56:38,765 | INFO     | fitting pss+swap vs Time
[2025-11-23 13:57:12] 2025-11-23 18:56:38,767 | INFO     | sum of square deviations: 452186944220.6345
[2025-11-23 13:57:12] 2025-11-23 18:56:38,812 | INFO     | sum of deviations: 2017201430723.3108
[2025-11-23 13:57:12] 2025-11-23 18:56:38,813 | INFO     | mean x: 1763889624.1164021
[2025-11-23 13:57:12] 2025-11-23 18:56:38,813 | INFO     | mean y: 2866525.4294532626
[2025-11-23 13:57:12] 2025-11-23 18:56:38,813 | INFO     | intersect: -7865827427.108689
[2025-11-23 13:57:12] 2025-11-23 18:56:38,815 | INFO     | chi2: 5.705991415230785
[2025-11-23 13:57:12] 2025-11-23 18:56:38,816 | INFO     | sum of square deviations: 446232189946.22675
[2025-11-23 13:57:12] 2025-11-23 18:56:38,861 | INFO     | sum of deviations: 2373772762497.7227
[2025-11-23 13:57:12] 2025-11-23 18:56:38,861 | INFO     | mean x: 1763889471.619132
[2025-11-23 13:57:12] 2025-11-23 18:56:38,862 | INFO     | mean y: 2875652.920283437
[2025-11-23 13:57:12] 2025-11-23 18:56:38,862 | INFO     | intersect: -9380294988.1098
[2025-11-23 13:57:12] 2025-11-23 18:56:38,863 | INFO     | chi2: 2.810430996937926
[2025-11-23 13:57:12] 2025-11-23 18:56:38,864 | INFO     | current chi2=2.810430996937926 (change=50.7459652070953 %)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,865 | INFO     | sum of square deviations: 440329948284.30176
[2025-11-23 13:57:12] 2025-11-23 18:56:38,909 | INFO     | sum of deviations: 2494475346829.588
[2025-11-23 13:57:12] 2025-11-23 18:56:38,910 | INFO     | mean x: 1763889319.121886
[2025-11-23 13:57:12] 2025-11-23 18:56:38,910 | INFO     | mean y: 2878768.703736655
[2025-11-23 13:57:12] 2025-11-23 18:56:38,910 | INFO     | intersect: -9989579019.43812
[2025-11-23 13:57:12] 2025-11-23 18:56:38,912 | INFO     | chi2: 2.351564246317593
[2025-11-23 13:57:12] 2025-11-23 18:56:38,912 | INFO     | current chi2=2.351564246317593 (change=16.327273329972737 %)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,912 | INFO     | right removable region: 1123
[2025-11-23 13:57:12] 2025-11-23 18:56:38,914 | INFO     | sum of square deviations: 446231763556.2269
[2025-11-23 13:57:12] 2025-11-23 18:56:38,960 | INFO     | sum of deviations: 1723779774952.4917
[2025-11-23 13:57:12] 2025-11-23 18:56:38,960 | INFO     | mean x: 1763889776.619132
[2025-11-23 13:57:12] 2025-11-23 18:56:38,961 | INFO     | mean y: 2874030.84765279
[2025-11-23 13:57:12] 2025-11-23 18:56:38,961 | INFO     | intersect: -6810978703.323312
[2025-11-23 13:57:12] 2025-11-23 18:56:38,962 | INFO     | chi2: 3.6711913704138808
[2025-11-23 13:57:12] 2025-11-23 18:56:38,962 | INFO     | current chi2=3.6711913704138808 (change=35.66076246426677 %)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,964 | INFO     | sum of square deviations: 440329233120.7854
[2025-11-23 13:57:12] 2025-11-23 18:56:38,992 | INFO     | sum of deviations: 1646844560299.5315
[2025-11-23 13:57:12] 2025-11-23 18:56:38,993 | INFO     | mean x: 1763889929.1201067
[2025-11-23 13:57:12] 2025-11-23 18:56:38,993 | INFO     | mean y: 2876018.2553380784
[2025-11-23 13:57:12] 2025-11-23 18:56:38,993 | INFO     | intersect: -6594125307.663336
[2025-11-23 13:57:12] 2025-11-23 18:56:38,994 | INFO     | chi2: 3.6110825607122075
[2025-11-23 13:57:12] 2025-11-23 18:56:38,994 | INFO     | current chi2=3.6110825607122075 (change=1.6373107157009035 %)
[2025-11-23 13:57:12] 2025-11-23 18:56:38,994 | INFO     | left removable region: 20
[2025-11-23 13:57:12] 2025-11-23 18:56:38,995 | INFO     | sum of square deviations: 416107696542.60944
[2025-11-23 13:57:12] 2025-11-23 18:56:39,017 | INFO     | sum of deviations: 2039023791682.0632
[2025-11-23 13:57:12] 2025-11-23 18:56:39,017 | INFO     | mean x: 1763889898.62466
[2025-11-23 13:57:12] 2025-11-23 18:56:39,017 | INFO     | mean y: 2891145.16681777
[2025-11-23 13:57:12] 2025-11-23 18:56:39,017 | INFO     | intersect: -8640576637.542294
[2025-11-23 13:57:12] 2025-11-23 18:56:39,018 | INFO     | chi2: 0.20929708392346075
[2025-11-23 13:57:12] 2025-11-23 18:56:39,018 | INFO     | current memory leak: 4.90 B/s (using 1103 data points, chi2=0.21)
[2025-11-23 13:57:12] 2025-11-23 18:56:39,019 | INFO     | could have reported an average CPU frequency of 2633 MHz (41 samples)
[2025-11-23 13:57:12] 2025-11-23 18:56:39,019 | INFO     | ..............................
[2025-11-23 13:57:12] 2025-11-23 18:56:39,019 | INFO     | . Timing measurements:
[2025-11-23 13:57:12] 2025-11-23 18:56:39,019 | INFO     | . get job = 0 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . initial setup = 2 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . payload setup = 5 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . stage-in = 0 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . payload execution = 69121 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . stage-out = 4 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | . log creation = 0 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,020 | INFO     | ..............................
[2025-11-23 13:57:12] 2025-11-23 18:56:39,134 | INFO     | 
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | job summary report
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | --------------------------------------------------
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | PanDA job id: 6895333627
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | task id: 47556137
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | errors: (none)
[2025-11-23 13:57:12] 2025-11-23 18:56:39,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | pilot state: finished 
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | transexitcode: 0
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | exeerrorcode: 0
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | exeerrordiag: 
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | exitcode: 0
[2025-11-23 13:57:12] 2025-11-23 18:56:39,136 | INFO     | exitmsg: OK
[2025-11-23 13:57:12] 2025-11-23 18:56:39,137 | INFO     | cpuconsumptiontime: 534441 s
[2025-11-23 13:57:12] 2025-11-23 18:56:39,137 | INFO     | nevents: 1000
[2025-11-23 13:57:12] 2025-11-23 18:56:39,137 | INFO     | neventsw: 0
[2025-11-23 13:57:12] 2025-11-23 18:56:39,137 | INFO     | pid: 6955
[2025-11-23 13:57:12] 2025-11-23 18:56:39,137 | INFO     | pgrp: 6955
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | corecount: 8
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | event service: False
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | sizes: {0: 2298750, 1: 2298750, 4: 2299040, 12: 2299068, 69130: 2355234, 69131: 2355233, 69136: 2364411, 69137: 2364467, 69143: 2364809}
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | --------------------------------------------------
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | 
[2025-11-23 13:57:12] 2025-11-23 18:56:39,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 13:57:12] 2025-11-23 18:56:39,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 13:57:12] 2025-11-23 18:56:39,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 13:57:12] 2025-11-23 18:56:39,172 | INFO     | job 6895333627 has completed (purged errors)
[2025-11-23 13:57:12] 2025-11-23 18:56:39,173 | INFO     | overall cleanup function is called
[2025-11-23 13:57:12] 2025-11-23 18:56:40,189 | INFO     | --- collectZombieJob: --- 10, [6955]
[2025-11-23 13:57:12] 2025-11-23 18:56:40,189 | INFO     | zombie collector waiting for pid 6955
[2025-11-23 13:57:12] 2025-11-23 18:56:40,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 13:57:12] 2025-11-23 18:56:40,189 | INFO     | collected zombie processes
[2025-11-23 13:57:12] 2025-11-23 18:56:40,189 | INFO     | will attempt to kill all subprocesses of pid=6955
[2025-11-23 13:57:12] 2025-11-23 18:56:40,328 | INFO     | process IDs to be killed: [6955] (in reverse order)
[2025-11-23 13:57:12] 2025-11-23 18:56:40,390 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 13:57:12] 2025-11-23 18:56:40,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 13:57:12] 2025-11-23 18:56:40,393 | INFO     | did not find any defunct processes belonging to 6955
[2025-11-23 13:57:12] 2025-11-23 18:56:40,396 | INFO     | did not find any defunct processes belonging to 6955
[2025-11-23 13:57:12] 2025-11-23 18:56:40,397 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 13:57:12] 2025-11-23 18:56:40,397 | INFO     | ready for new job
[2025-11-23 13:57:12] 2025-11-23 18:56:40,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 13:57:12] 2025-11-23 18:56:40,401 | INFO     | ***************************************
[2025-11-23 13:57:12] 2025-11-23 18:56:40,401 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 13:57:12] 2025-11-23 18:56:40,401 | INFO     | ***************************************
[2025-11-23 13:57:12] 2025-11-23 18:56:40,401 | INFO     | 
[2025-11-23 13:57:12] 2025-11-23 18:56:40,402 | INFO     | architecture information:
[2025-11-23 13:57:12] 2025-11-23 18:56:40,403 | INFO     | executing command: cat /etc/os-release
[2025-11-23 13:57:12] 2025-11-23 18:56:40,412 | INFO     | cat /etc/os-release:
[2025-11-23 13:57:12] NAME="CentOS Linux"
[2025-11-23 13:57:12] VERSION="7 (Core)"
[2025-11-23 13:57:12] ID="centos"
[2025-11-23 13:57:12] ID_LIKE="rhel fedora"
[2025-11-23 13:57:12] VERSION_ID="7"
[2025-11-23 13:57:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 13:57:12] ANSI_COLOR="0;31"
[2025-11-23 13:57:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 13:57:12] HOME_URL="https://www.centos.org/"
[2025-11-23 13:57:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 13:57:12] 
[2025-11-23 13:57:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 13:57:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 13:57:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 13:57:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 13:57:12] 
[2025-11-23 13:57:12] 2025-11-23 18:56:40,412 | INFO     | ***************************************
[2025-11-23 13:57:12] 2025-11-23 18:56:40,915 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 13:57:12] 2025-11-23 18:56:40,931 | INFO     | sufficient remaining disk space (24931991552 B)
[2025-11-23 13:57:12] 2025-11-23 18:56:40,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 13:57:12] 2025-11-23 18:56:40,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 13:57:12] 2025-11-23 18:56:40,932 | INFO     | update_server=False
[2025-11-23 13:57:12] 2025-11-23 18:56:40,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 13:57:12] 2025-11-23 18:56:40,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:57:12] 2025-11-23 18:56:40,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 13:57:12] 2025-11-23 18:56:40,933 | INFO     | aborting loop
[2025-11-23 13:57:12] 2025-11-23 18:56:40,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 13:57:12] 2025-11-23 18:56:41,329 | INFO     | all job control threads have been joined
[2025-11-23 13:57:12] 2025-11-23 18:56:41,643 | INFO     | all data control threads have been joined
[2025-11-23 13:57:12] 2025-11-23 18:56:41,938 | INFO     | [job] retrieve thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:41,938 | INFO     | [job] queue monitor thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:41,939 | INFO     | [job] job monitor thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,048 | INFO     | [payload] failed_post thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,091 | INFO     | [data] copytool_in thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,319 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,334 | INFO     | [job] control thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,425 | INFO     | all payload control threads have been joined
[2025-11-23 13:57:12] 2025-11-23 18:56:42,648 | INFO     | [data] control thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,939 | INFO     | [data] copytool_out thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,953 | INFO     | [job] validate thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:42,953 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:43,364 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:43,430 | INFO     | [payload] control thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:43,459 | INFO     | [payload] validate_post thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:43,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 13:57:12] 2025-11-23 18:56:47,623 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 13:57:12] 2025-11-23 18:56:54,266 | INFO     | [monitor] cgroup control has ended
[2025-11-23 13:57:12] 2025-11-23 18:56:55,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785967507264)>', '<ExcThread(monitor, started 139785523939072)>']
[2025-11-23 13:57:12] 2025-11-23 18:57:00,297 | INFO     | all workflow threads have been joined
[2025-11-23 13:57:12] 2025-11-23 18:57:00,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 13:57:12] 2025-11-23 18:57:00,297 | INFO     | traces error code: 0
[2025-11-23 13:57:12] 2025-11-23 18:57:00,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 13:57:12] 2025-11-23 18:57:11,767 | INFO     | PID=32735 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 13:57:12] 2025-11-23 18:57:11,767 | INFO     | .. there are 3 such processes running
[2025-11-23 13:57:12] 2025-11-23 18:57:11,768 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 13:57:12] 2025-11-23 18:57:11,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 13:57:12] 2025-11-23 18:57:11,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 13:57:12] 2025-11-23 18:57:11,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 13:57:12] 2025-11-23 18:57:11,768 | INFO     | [monitor] control thread has ended
[2025-11-23 13:57:12] 2025-11-23 18:57:11,902 [wrapper] ==== pilot stdout END ====
[2025-11-23 13:57:12] 2025-11-23 18:57:11,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 13:57:12] 2025-11-23 18:57:11,907 [wrapper] pilotpid: 32735
[2025-11-23 13:57:12] 2025-11-23 18:57:11,910 [wrapper] Pilot exit status: 0
[2025-11-23 13:57:12] 2025-11-23 18:57:11,919 [wrapper] pandaids: 6895333627
[2025-11-23 13:57:12] 2025-11-23 18:57:11,962 [wrapper] cleanup supervisor_pilot  5664 32736
[2025-11-23 13:57:12] 2025-11-23 18:57:11,964 [wrapper] Test setup, not cleaning
[2025-11-23 13:57:12] 2025-11-23 18:57:11,967 [wrapper] apfmon messages muted
[2025-11-23 13:57:12] 2025-11-23 18:57:11,969 [wrapper] ==== wrapper stdout END ====
[2025-11-23 13:57:12] 2025-11-23 18:57:11,972 [wrapper] ==== wrapper stderr END ====
[2025-11-23 13:57:12]  *** Error codes and diagnostics ***
[2025-11-23 13:57:12]     "exeErrorCode": 0,
[2025-11-23 13:57:12]     "exeErrorDiag": "",
[2025-11-23 13:57:12]     "pilotErrorCode": 0,
[2025-11-23 13:57:12]     "pilotErrorDiag": "",
[2025-11-23 13:57:12]  *** Listing of results directory ***
[2025-11-23 13:57:12] total 1317708
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:38 pilot3.tar.gz
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 20:51 queuedata.json
[2025-11-23 13:57:12] -rwx------ 1 boincer umatlas     36292 Nov 21 20:53 runpilot2-wrapper.sh
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas       100 Nov 22 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 13:57:12] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 18:43 run_atlas
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas       105 Nov 22 18:43 job.xml
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas 407301141 Nov 22 18:43 EVNT.47483658._000210.pool.root.1
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:43 start_atlas.sh
[2025-11-23 13:57:12] drwxrwx--x 2 boincer umatlas      4096 Nov 22 18:43 shared
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas    590093 Nov 22 18:43 input.tar.gz
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas         0 Nov 22 18:43 boinc_lockfile
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas      2782 Nov 22 18:43 pandaJob.out
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas        57 Nov 22 18:43 setup.sh.local
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas    989784 Nov 22 18:43 agis_schedconf.cvmfs.json
[2025-11-23 13:57:12] drwx------ 5 boincer umatlas      4096 Nov 22 18:44 pilot3
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas       532 Nov 23 13:45 boinc_task_state.xml
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas      5953 Nov 23 13:45 init_data.xml
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas 914373734 Nov 23 13:55 HITS.47556137._002061.pool.root.1
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas      1066 Nov 23 13:56 memory_monitor_summary.json
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas   1526164 Nov 23 13:56 agis_ddmendpoints.agis.ALL.json
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas   2303096 Nov 23 13:56 log.47556137._002061.job.log.tgz.1
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas        95 Nov 23 13:56 pilot_heartbeat.json
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas      8656 Nov 23 13:56 heartbeat.json
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 13:56 boinc_mmap_file
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas        29 Nov 23 13:56 wrapper_checkpoint.txt
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas       820 Nov 23 13:57 pilotlog.txt
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas   9566352 Nov 23 13:57 log.47556137._002061.job.log.1
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas       353 Nov 23 13:57 output.list
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas       620 Nov 23 13:57 runtime_log
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas  11888640 Nov 23 13:57 result.tar.gz
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 13:57 runtime_log.err
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas       667 Nov 23 13:57 amWKDmszrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8qJKDmPb6hhn.diag
[2025-11-23 13:57:12] -rw-r--r-- 1 boincer umatlas     21327 Nov 23 13:57 stderr.txt
[2025-11-23 13:57:12] HITS file was successfully produced:
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas 914373734 Nov 23 13:55 shared/HITS.pool.root.1
[2025-11-23 13:57:12]  *** Contents of shared directory: ***
[2025-11-23 13:57:12] total 1302912
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas 407301141 Nov 22 18:43 ATLAS.root_0
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:43 start_atlas.sh
[2025-11-23 13:57:12] -rw-r--r-- 2 boincer umatlas    590093 Nov 22 18:43 input.tar.gz
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas 914373734 Nov 23 13:55 HITS.pool.root.1
[2025-11-23 13:57:12] -rw------- 1 boincer umatlas  11888640 Nov 23 13:57 result.tar.gz
13:57:14 (29048): run_atlas exited; CPU time 533379.090679
13:57:14 (29048): called boinc_finish(0)

</stderr_txt>
]]>

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