Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:53:44 (28180): wrapper (7.7.26015): starting
18:53:44 (28180): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 18:53:44] Arguments: --nthreads 8
[2025-11-22 18:53:44] Threads: 8
[2025-11-22 18:53:44] Checking for CVMFS
[2025-11-22 18:53:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:53:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:53:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:53:44] 2.11.2.0 2466 112595 132820 153190 3 90 11081170 18432000 1868 130560 0 79087181 99.972 4895133 28065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:53:44] CVMFS is ok
[2025-11-22 18:53:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:53:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:53:45] Further information can be found at the LHC@home message board.
[2025-11-22 18:53:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:53:45] Checking for apptainer binary...
[2025-11-22 18:53:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:53:45] Running /usr/bin/apptainer --version
[2025-11-22 18:53:45] apptainer version 1.3.2-1.el7
[2025-11-22 18:53:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:53:45] c-206-20.aglt2.org
[2025-11-22 18:53:45] apptainer works
[2025-11-22 18:53:45] Set ATHENA_PROC_NUMBER=8
[2025-11-22 18:53:45] Set ATHENA_CORE_NUMBER=8
[2025-11-22 18:53:45] Starting ATLAS job with PandaID=6895325354
[2025-11-22 18:53:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:44:01]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:44:01] 2025-11-23 19:43:03,045 | INFO     | monitor loop #5102: job 0:6895325354 is in state 'finished'
[2025-11-23 14:44:01] 2025-11-23 19:43:03,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,680 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 14:44:01] 2025-11-23 19:43:04,686 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2025-11-23 14:44:01] 2025-11-23 19:43:04,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895325354/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,692 | INFO     | extracted standard info from prmon json
[2025-11-23 14:44:01] 2025-11-23 19:43:04,692 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:44:01] 2025-11-23 19:43:04,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:44:01] 2025-11-23 19:43:04,722 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:44:01] 2025-11-23 19:43:04,724 | INFO     | sum of square deviations: 495360512084.8795
[2025-11-23 14:44:01] 2025-11-23 19:43:04,771 | INFO     | sum of deviations: 2551433136709.514
[2025-11-23 14:44:01] 2025-11-23 19:43:04,771 | INFO     | mean x: 1763891286.6218991
[2025-11-23 14:44:01] 2025-11-23 19:43:04,772 | INFO     | mean y: 2872402.7613344737
[2025-11-23 14:44:01] 2025-11-23 19:43:04,772 | INFO     | intersect: -9082330330.292093
[2025-11-23 14:44:01] 2025-11-23 19:43:04,773 | INFO     | chi2: 5.028331535142227
[2025-11-23 14:44:01] 2025-11-23 19:43:04,775 | INFO     | sum of square deviations: 489031666312.9372
[2025-11-23 14:44:01] 2025-11-23 19:43:04,822 | INFO     | sum of deviations: 2867224494389.445
[2025-11-23 14:44:01] 2025-11-23 19:43:04,823 | INFO     | mean x: 1763891134.1245704
[2025-11-23 14:44:01] 2025-11-23 19:43:04,823 | INFO     | mean y: 2880008.383161512
[2025-11-23 14:44:01] 2025-11-23 19:43:04,823 | INFO     | intersect: -10338928536.100763
[2025-11-23 14:44:01] 2025-11-23 19:43:04,825 | INFO     | chi2: 2.8370843299077735
[2025-11-23 14:44:01] 2025-11-23 19:43:04,825 | INFO     | current chi2=2.8370843299077735 (change=43.57801767684107 %)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,826 | INFO     | sum of square deviations: 482756961090.9789
[2025-11-23 14:44:01] 2025-11-23 19:43:04,873 | INFO     | sum of deviations: 2958721301386.849
[2025-11-23 14:44:01] 2025-11-23 19:43:04,873 | INFO     | mean x: 1763890981.627265
[2025-11-23 14:44:01] 2025-11-23 19:43:04,874 | INFO     | mean y: 2882229.9163071616
[2025-11-23 14:44:01] 2025-11-23 19:43:04,874 | INFO     | intersect: -10807654419.561892
[2025-11-23 14:44:01] 2025-11-23 19:43:04,875 | INFO     | chi2: 2.5365061234423383
[2025-11-23 14:44:01] 2025-11-23 19:43:04,876 | INFO     | current chi2=2.5365061234423383 (change=10.594616568031528 %)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,876 | INFO     | right removable region: 1158
[2025-11-23 14:44:01] 2025-11-23 19:43:04,877 | INFO     | sum of square deviations: 489031293908.1855
[2025-11-23 14:44:01] 2025-11-23 19:43:04,924 | INFO     | sum of deviations: 2235794457008.447
[2025-11-23 14:44:01] 2025-11-23 19:43:04,925 | INFO     | mean x: 1763891439.1237113
[2025-11-23 14:44:01] 2025-11-23 19:43:04,925 | INFO     | mean y: 2880000.2121993126
[2025-11-23 14:44:01] 2025-11-23 19:43:04,925 | INFO     | intersect: -8061427440.811946
[2025-11-23 14:44:01] 2025-11-23 19:43:04,927 | INFO     | chi2: 2.887579141606408
[2025-11-23 14:44:01] 2025-11-23 19:43:04,927 | INFO     | current chi2=2.887579141606408 (change=42.57381158291639 %)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,928 | INFO     | sum of square deviations: 482756429660.2295
[2025-11-23 14:44:01] 2025-11-23 19:43:04,936 | INFO     | time since job start (71347s) is within the limit (172800.0s)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,964 | INFO     | sum of deviations: 2143001564717.0476
[2025-11-23 14:44:01] 2025-11-23 19:43:04,964 | INFO     | mean x: 1763891591.6229508
[2025-11-23 14:44:01] 2025-11-23 19:43:04,964 | INFO     | mean y: 2882255.0207075067
[2025-11-23 14:44:01] 2025-11-23 19:43:04,965 | INFO     | intersect: -7827199766.87936
[2025-11-23 14:44:01] 2025-11-23 19:43:04,966 | INFO     | chi2: 2.803714714615367
[2025-11-23 14:44:01] 2025-11-23 19:43:04,966 | INFO     | current chi2=2.803714714615367 (change=2.904316137440505 %)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,966 | INFO     | left removable region: 20
[2025-11-23 14:44:01] 2025-11-23 19:43:04,967 | INFO     | sum of square deviations: 456987956964.22784
[2025-11-23 14:44:01] 2025-11-23 19:43:04,990 | INFO     | sum of deviations: 2414604889887.739
[2025-11-23 14:44:01] 2025-11-23 19:43:04,990 | INFO     | mean x: 1763891561.1318102
[2025-11-23 14:44:01] 2025-11-23 19:43:04,990 | INFO     | mean y: 2895434.308435852
[2025-11-23 14:44:01] 2025-11-23 19:43:04,990 | INFO     | intersect: -9317046423.752346
[2025-11-23 14:44:01] 2025-11-23 19:43:04,991 | INFO     | chi2: 0.2564995868547894
[2025-11-23 14:44:01] 2025-11-23 19:43:04,991 | INFO     | current memory leak: 5.28 B/s (using 1138 data points, chi2=0.26)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,993 | INFO     | could have reported an average CPU frequency of 2630 MHz (42 samples)
[2025-11-23 14:44:01] 2025-11-23 19:43:04,993 | INFO     | ..............................
[2025-11-23 14:44:01] 2025-11-23 19:43:04,993 | INFO     | . Timing measurements:
[2025-11-23 14:44:01] 2025-11-23 19:43:04,993 | INFO     | . get job = 0 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,993 | INFO     | . initial setup = 2 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | . payload setup = 5 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | . stage-in = 0 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | . payload execution = 71311 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | . stage-out = 3 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | . log creation = 0 s
[2025-11-23 14:44:01] 2025-11-23 19:43:04,994 | INFO     | ..............................
[2025-11-23 14:44:01] 2025-11-23 19:43:05,163 | INFO     | 
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | job summary report
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | --------------------------------------------------
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | PanDA job id: 6895325354
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | task id: 47556149
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | errors: (none)
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:44:01] 2025-11-23 19:43:05,164 | INFO     | pilot state: finished 
[2025-11-23 14:44:01] 2025-11-23 19:43:05,165 | INFO     | transexitcode: 0
[2025-11-23 14:44:01] 2025-11-23 19:43:05,165 | INFO     | exeerrorcode: 0
[2025-11-23 14:44:01] 2025-11-23 19:43:05,165 | INFO     | exeerrordiag: 
[2025-11-23 14:44:01] 2025-11-23 19:43:05,165 | INFO     | exitcode: 0
[2025-11-23 14:44:01] 2025-11-23 19:43:05,165 | INFO     | exitmsg: OK
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | cpuconsumptiontime: 549114 s
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | nevents: 1000
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | neventsw: 0
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | pid: 6089
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | pgrp: 6089
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | corecount: 8
[2025-11-23 14:44:01] 2025-11-23 19:43:05,166 | INFO     | event service: False
[2025-11-23 14:44:01] 2025-11-23 19:43:05,167 | INFO     | sizes: {0: 2298632, 1: 2298831, 4: 2299093, 12: 2299121, 71320: 2356108, 71324: 2365102, 71327: 2365286, 71333: 2365532}
[2025-11-23 14:44:01] 2025-11-23 19:43:05,167 | INFO     | --------------------------------------------------
[2025-11-23 14:44:01] 2025-11-23 19:43:05,167 | INFO     | 
[2025-11-23 14:44:01] 2025-11-23 19:43:05,167 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 14:44:01] 2025-11-23 19:43:05,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:44:01] 2025-11-23 19:43:05,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:44:01] 2025-11-23 19:43:05,189 | INFO     | job 6895325354 has completed (purged errors)
[2025-11-23 14:44:01] 2025-11-23 19:43:05,189 | INFO     | overall cleanup function is called
[2025-11-23 14:44:01] 2025-11-23 19:43:06,205 | INFO     | --- collectZombieJob: --- 10, [6089]
[2025-11-23 14:44:01] 2025-11-23 19:43:06,205 | INFO     | zombie collector waiting for pid 6089
[2025-11-23 14:44:01] 2025-11-23 19:43:06,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:44:01] 2025-11-23 19:43:06,205 | INFO     | collected zombie processes
[2025-11-23 14:44:01] 2025-11-23 19:43:06,205 | INFO     | will attempt to kill all subprocesses of pid=6089
[2025-11-23 14:44:01] 2025-11-23 19:43:06,382 | INFO     | process IDs to be killed: [6089] (in reverse order)
[2025-11-23 14:44:01] 2025-11-23 19:43:06,425 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:44:01] 2025-11-23 19:43:06,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:44:01] 2025-11-23 19:43:06,428 | INFO     | did not find any defunct processes belonging to 6089
[2025-11-23 14:44:01] 2025-11-23 19:43:06,431 | INFO     | did not find any defunct processes belonging to 6089
[2025-11-23 14:44:01] 2025-11-23 19:43:06,432 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:44:01] 2025-11-23 19:43:06,432 | INFO     | ready for new job
[2025-11-23 14:44:01] 2025-11-23 19:43:06,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:44:01] 2025-11-23 19:43:06,436 | INFO     | ***************************************
[2025-11-23 14:44:01] 2025-11-23 19:43:06,436 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:44:01] 2025-11-23 19:43:06,437 | INFO     | ***************************************
[2025-11-23 14:44:01] 2025-11-23 19:43:06,437 | INFO     | 
[2025-11-23 14:44:01] 2025-11-23 19:43:06,437 | INFO     | architecture information:
[2025-11-23 14:44:01] 2025-11-23 19:43:06,438 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:44:01] 2025-11-23 19:43:06,447 | INFO     | cat /etc/os-release:
[2025-11-23 14:44:01] NAME="CentOS Linux"
[2025-11-23 14:44:01] VERSION="7 (Core)"
[2025-11-23 14:44:01] ID="centos"
[2025-11-23 14:44:01] ID_LIKE="rhel fedora"
[2025-11-23 14:44:01] VERSION_ID="7"
[2025-11-23 14:44:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:44:01] ANSI_COLOR="0;31"
[2025-11-23 14:44:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:44:01] HOME_URL="https://www.centos.org/"
[2025-11-23 14:44:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:44:01] 
[2025-11-23 14:44:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:44:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:44:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:44:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:44:01] 
[2025-11-23 14:44:01] 2025-11-23 19:43:06,447 | INFO     | ***************************************
[2025-11-23 14:44:01] 2025-11-23 19:43:06,951 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 14:44:01] 2025-11-23 19:43:06,968 | INFO     | sufficient remaining disk space (25479348224 B)
[2025-11-23 14:44:01] 2025-11-23 19:43:06,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:44:01] 2025-11-23 19:43:06,969 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:44:01] 2025-11-23 19:43:06,969 | INFO     | update_server=False
[2025-11-23 14:44:01] 2025-11-23 19:43:06,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:44:01] 2025-11-23 19:43:06,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:44:01] 2025-11-23 19:43:06,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:44:01] 2025-11-23 19:43:06,970 | INFO     | aborting loop
[2025-11-23 14:44:01] 2025-11-23 19:43:06,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:44:01] 2025-11-23 19:43:07,551 | INFO     | all data control threads have been joined
[2025-11-23 14:44:01] 2025-11-23 19:43:07,562 | INFO     | all job control threads have been joined
[2025-11-23 14:44:01] 2025-11-23 19:43:07,761 | INFO     | all payload control threads have been joined
[2025-11-23 14:44:01] 2025-11-23 19:43:07,971 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:07,971 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:07,971 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,002 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,557 | INFO     | [data] control thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,568 | INFO     | [job] control thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,677 | INFO     | [job] validate thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,698 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,740 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,766 | INFO     | [payload] control thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,780 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:08,977 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:09,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:09,206 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:09,443 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:09,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:44:01] 2025-11-23 19:43:13,758 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:44:01] 2025-11-23 19:43:38,198 | INFO     | PID=31887 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 14:44:01] 2025-11-23 19:43:38,198 | INFO     | .. there are 3 such processes running
[2025-11-23 14:44:01] 2025-11-23 19:43:38,199 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:44:01] 2025-11-23 19:43:38,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:44:01] 2025-11-23 19:43:38,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:44:01] 2025-11-23 19:43:54,548 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:44:01] 2025-11-23 19:43:55,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393134008128)>', '<ExcThread(monitor, started 140392473290496)>']
[2025-11-23 14:44:01] 2025-11-23 19:43:56,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:44:01] 2025-11-23 19:43:56,287 | INFO     | [monitor] control thread has ended
[2025-11-23 14:44:01] 2025-11-23 19:44:01,003 | INFO     | all workflow threads have been joined
[2025-11-23 14:44:01] 2025-11-23 19:44:01,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:44:01] 2025-11-23 19:44:01,003 | INFO     | traces error code: 0
[2025-11-23 14:44:01] 2025-11-23 19:44:01,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:44:01] 2025-11-23 19:44:01,113 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:44:01] 2025-11-23 19:44:01,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:44:01] 2025-11-23 19:44:01,117 [wrapper] pilotpid: 31887
[2025-11-23 14:44:01] 2025-11-23 19:44:01,119 [wrapper] Pilot exit status: 0
[2025-11-23 14:44:01] 2025-11-23 19:44:01,132 [wrapper] pandaids: 6895325354
[2025-11-23 14:44:01] 2025-11-23 19:44:01,172 [wrapper] cleanup supervisor_pilot 25338 31888
[2025-11-23 14:44:01] 2025-11-23 19:44:01,174 [wrapper] Test setup, not cleaning
[2025-11-23 14:44:01] 2025-11-23 19:44:01,177 [wrapper] apfmon messages muted
[2025-11-23 14:44:01] 2025-11-23 19:44:01,179 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:44:01] 2025-11-23 19:44:01,181 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:44:01]  *** Error codes and diagnostics ***
[2025-11-23 14:44:01]     "exeErrorCode": 0,
[2025-11-23 14:44:01]     "exeErrorDiag": "",
[2025-11-23 14:44:01]     "pilotErrorCode": 0,
[2025-11-23 14:44:01]     "pilotErrorDiag": "",
[2025-11-23 14:44:01]  *** Listing of results directory ***
[2025-11-23 14:44:01] total 1336148
[2025-11-23 14:44:01] -rwx------ 1 boincer umatlas     36292 Nov 21 09:45 runpilot2-wrapper.sh
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 09:45 pilot3.tar.gz
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 09:45 queuedata.json
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas       100 Nov 22 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:44:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 18:53 run_atlas
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas       105 Nov 22 18:53 job.xml
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas 409728012 Nov 22 18:53 EVNT.47483658._001020.pool.root.1
[2025-11-23 14:44:01] drwxrwx--x 2 boincer umatlas      4096 Nov 22 18:53 shared
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas    590093 Nov 22 18:53 input.tar.gz
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:53 start_atlas.sh
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas         0 Nov 22 18:53 boinc_lockfile
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 18:53 pandaJob.out
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas        57 Nov 22 18:53 setup.sh.local
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas    989784 Nov 22 18:53 agis_schedconf.cvmfs.json
[2025-11-23 14:44:01] drwx------ 5 boincer umatlas      4096 Nov 22 18:53 pilot3
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas       533 Nov 23 14:32 boinc_task_state.xml
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 14:39 init_data.xml
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas 930185406 Nov 23 14:42 HITS.47556149._000062.pool.root.1
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas      1067 Nov 23 14:42 memory_monitor_summary.json
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas   1526164 Nov 23 14:42 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas   2330270 Nov 23 14:42 log.47556149._000062.job.log.tgz.1
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas      8657 Nov 23 14:43 heartbeat.json
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas        95 Nov 23 14:43 pilot_heartbeat.json
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 14:43 boinc_mmap_file
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas        29 Nov 23 14:43 wrapper_checkpoint.txt
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas      4821 Nov 23 14:44 pilotlog.txt
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas   9858499 Nov 23 14:44 log.47556149._000062.job.log.1
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas       353 Nov 23 14:44 output.list
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas       620 Nov 23 14:44 runtime_log
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas  12206080 Nov 23 14:44 result.tar.gz
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 14:44 runtime_log.err
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas       668 Nov 23 14:44 lEbKDmBZhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWgHKDmMegXWo.diag
[2025-11-23 14:44:01] -rw-r--r-- 1 boincer umatlas     21288 Nov 23 14:44 stderr.txt
[2025-11-23 14:44:01] HITS file was successfully produced:
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas 930185406 Nov 23 14:42 shared/HITS.pool.root.1
[2025-11-23 14:44:01]  *** Contents of shared directory: ***
[2025-11-23 14:44:01] total 1321040
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas 409728012 Nov 22 18:53 ATLAS.root_0
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas    590093 Nov 22 18:53 input.tar.gz
[2025-11-23 14:44:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:53 start_atlas.sh
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas 930185406 Nov 23 14:42 HITS.pool.root.1
[2025-11-23 14:44:01] -rw------- 1 boincer umatlas  12206080 Nov 23 14:44 result.tar.gz
14:44:02 (28180): run_atlas exited; CPU time 547787.492690
14:44:02 (28180): called boinc_finish(0)

</stderr_txt>
]]>

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