Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:18:50 (1794471): wrapper (7.7.26015): starting
00:18:50 (1794471): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 00:18:50] Arguments: --nthreads 3
[2025-11-23 00:18:50] Threads: 3
[2025-11-23 00:18:50] Checking for CVMFS
[2025-11-23 00:18:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:18:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:18:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:18:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:18:50] 2.9.2.0 1731473 13 52924 153190 2 16 34765537 36864001 0 130560 0 187837 99.998 3879 13149 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 00:18:50] CVMFS is ok
[2025-11-23 00:18:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:18:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:18:50] Further information can be found at the LHC@home message board.
[2025-11-23 00:18:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:18:50] Checking for apptainer binary...
[2025-11-23 00:18:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:18:50] Running /usr/bin/apptainer --version
[2025-11-23 00:18:50] apptainer version 1.4.1-1.1
[2025-11-23 00:18:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:18:50] thA335
[2025-11-23 00:18:50] apptainer works
[2025-11-23 00:18:51] Set ATHENA_PROC_NUMBER=3
[2025-11-23 00:18:51] Set ATHENA_CORE_NUMBER=3
[2025-11-23 00:18:51] Starting ATLAS job with PandaID=6895333360
[2025-11-23 00:18:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:23:07]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:23:07] 2025-11-22 23:22:15,080 | INFO     | ***************************************
[2025-11-23 00:23:07] 2025-11-22 23:22:15,584 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 00:23:07] 2025-11-22 23:22:15,597 | INFO     | sufficient remaining disk space (828097167360 B)
[2025-11-23 00:23:07] 2025-11-22 23:22:15,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:23:07] 2025-11-22 23:22:15,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:23:07] 2025-11-22 23:22:15,598 | INFO     | update_server=False
[2025-11-23 00:23:07] 2025-11-22 23:22:15,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:23:07] 2025-11-22 23:22:15,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:23:07] 2025-11-22 23:22:15,598 | INFO     | aborting loop
[2025-11-23 00:23:07] 2025-11-22 23:22:15,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:23:07] 2025-11-22 23:22:16,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:23:07] 2025-11-22 23:22:16,258 | INFO     | all data control threads have been joined
[2025-11-23 00:23:07] 2025-11-22 23:22:16,601 | INFO     | all payload control threads have been joined
[2025-11-23 00:23:07] 2025-11-22 23:22:16,603 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:16,604 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:16,605 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,141 | INFO     | all job control threads have been joined
[2025-11-23 00:23:07] 2025-11-22 23:22:17,172 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,264 | INFO     | [data] control thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,556 | INFO     | [job] validate thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,607 | INFO     | [payload] control thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,630 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,630 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,696 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:17,924 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:18,105 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:18,147 | INFO     | [job] control thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:18,216 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:18,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:23:07] 2025-11-22 23:22:22,254 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:23:07] 2025-11-22 23:22:45,750 | INFO     | PID=1798206 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:23:07] 2025-11-22 23:22:45,750 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:23:07] 2025-11-22 23:22:45,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:23:07] 2025-11-22 23:22:45,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:23:07] 2025-11-22 23:23:00,884 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:23:07] 2025-11-22 23:23:02,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428886824768)>', '<ExcThread(monitor, started 140428024203008)>']
[2025-11-23 00:23:07] 2025-11-22 23:23:02,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:23:07] 2025-11-22 23:23:02,842 | INFO     | [monitor] control thread has ended
[2025-11-23 00:23:07] 2025-11-22 23:23:07,127 | INFO     | all workflow threads have been joined
[2025-11-23 00:23:07] 2025-11-22 23:23:07,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:23:07] 2025-11-22 23:23:07,128 | INFO     | traces error code: 0
[2025-11-23 00:23:07] 2025-11-22 23:23:07,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:23:07] 2025-11-22 23:23:07,175 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:23:07] 2025-11-22 23:23:07,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:23:07] 2025-11-22 23:23:07,181 [wrapper] pilotpid: 1798206
[2025-11-23 00:23:07] 2025-11-22 23:23:07,184 [wrapper] Pilot exit status: 0
[2025-11-23 00:23:07] 2025-11-22 23:23:07,192 [wrapper] pandaids: 6895333360
[2025-11-23 00:23:07] 2025-11-22 23:23:07,209 [wrapper] cleanup supervisor_pilot 1798212 1798207
[2025-11-23 00:23:07] 2025-11-22 23:23:07,212 [wrapper] Test setup, not cleaning
[2025-11-23 00:23:07] 2025-11-22 23:23:07,215 [wrapper] apfmon messages muted
[2025-11-23 00:23:07] 2025-11-22 23:23:07,217 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:23:07] 2025-11-22 23:23:07,220 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:23:07]  *** Error codes and diagnostics ***
[2025-11-23 00:23:07]     "exeErrorCode": 65,
[2025-11-23 00:23:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 00:23:07]     "pilotErrorCode": 1305,
[2025-11-23 00:23:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 00:23:07]  *** Listing of results directory ***
[2025-11-23 00:23:07] total 403940
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc    576529 Nov 22 02:28 pilot3.tar.gz
[2025-11-23 00:23:07] -rwx------ 1 boinc boinc     36292 Nov 22 02:29 runpilot2-wrapper.sh
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      5112 Nov 22 02:29 queuedata.json
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc       100 Nov 23 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:23:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 00:18 run_atlas
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc       105 Nov 23 00:18 job.xml
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc 409428980 Nov 23 00:18 EVNT.47483658._000199.pool.root.1
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc    590090 Nov 23 00:18 input.tar.gz
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:18 start_atlas.sh
[2025-11-23 00:23:07] drwxrwx--x 2 boinc boinc      4096 Nov 23 00:18 shared
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:18 boinc_setup_complete
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      6194 Nov 23 00:18 init_data.xml
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:18 boinc_lockfile
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      2785 Nov 23 00:18 pandaJob.out
[2025-11-23 00:23:07] -rw------- 1 boinc boinc    989784 Nov 23 00:18 agis_schedconf.cvmfs.json
[2025-11-23 00:23:07] -rw------- 1 boinc boinc   1526164 Nov 23 00:19 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:23:07] drwx------ 5 boinc boinc      4096 Nov 23 00:19 pilot3
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc       522 Nov 23 00:19 boinc_task_state.xml
[2025-11-23 00:23:07] -rw------- 1 boinc boinc       954 Nov 23 00:20 memory_monitor_summary.json
[2025-11-23 00:23:07] -rw------- 1 boinc boinc     55882 Nov 23 00:20 log.47556137._001973.job.log.tgz.1
[2025-11-23 00:23:07] -rw------- 1 boinc boinc        95 Nov 23 00:22 pilot_heartbeat.json
[2025-11-23 00:23:07] -rw------- 1 boinc boinc      8403 Nov 23 00:22 heartbeat.json
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      8192 Nov 23 00:23 boinc_mmap_file
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc        22 Nov 23 00:23 wrapper_checkpoint.txt
[2025-11-23 00:23:07] -rw------- 1 boinc boinc      4752 Nov 23 00:23 pilotlog.txt
[2025-11-23 00:23:07] -rw------- 1 boinc boinc     93463 Nov 23 00:23 log.47556137._001973.job.log.1
[2025-11-23 00:23:07] -rw------- 1 boinc boinc       186 Nov 23 00:23 output.list
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc       620 Nov 23 00:23 runtime_log
[2025-11-23 00:23:07] -rw------- 1 boinc boinc    174080 Nov 23 00:23 result.tar.gz
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      8744 Nov 23 00:23 runtime_log.err
[2025-11-23 00:23:07] -rw------- 1 boinc boinc       649 Nov 23 00:23 88fKDmtcrg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCtHKDmRGO4Vo.diag
[2025-11-23 00:23:07] -rw-r--r-- 1 boinc boinc      8334 Nov 23 00:23 stderr.txt
[2025-11-23 00:23:07] No HITS result produced
[2025-11-23 00:23:07]  *** Contents of shared directory: ***
[2025-11-23 00:23:07] total 400608
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc 409428980 Nov 23 00:18 ATLAS.root_0
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc    590090 Nov 23 00:18 input.tar.gz
[2025-11-23 00:23:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:18 start_atlas.sh
[2025-11-23 00:23:07] -rw------- 1 boinc boinc    174080 Nov 23 00:23 result.tar.gz
00:23:08 (1794471): run_atlas exited; CPU time 31.711689
00:23:08 (1794471): called boinc_finish(0)

</stderr_txt>
]]>

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