Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:27 (8926): wrapper (7.7.26015): starting
18:04:27 (8926): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 18:04:27] Arguments: --nthreads 12
[2025-11-22 18:04:27] Threads: 12
[2025-11-22 18:04:27] Checking for CVMFS
[2025-11-22 18:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:04:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:04:27] 2.11.2.0 2933 282558 92256 153187 3 81 12870269 20275200 1 130560 2 126594793 99.962 17022810 14611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:04:27] CVMFS is ok
[2025-11-22 18:04:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:04:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:04:27] Further information can be found at the LHC@home message board.
[2025-11-22 18:04:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:04:27] Checking for apptainer binary...
[2025-11-22 18:04:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:04:27] Running /usr/bin/apptainer --version
[2025-11-22 18:04:27] apptainer version 1.3.2-1.el7
[2025-11-22 18:04:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:04:28] c-205-15.aglt2.org
[2025-11-22 18:04:28] apptainer works
[2025-11-22 18:04:28] Set ATHENA_PROC_NUMBER=12
[2025-11-22 18:04:28] Set ATHENA_CORE_NUMBER=12
[2025-11-22 18:04:28] Starting ATLAS job with PandaID=6894052070
[2025-11-22 18:04:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:47:04]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:47:04] 2025-11-23 01:46:11,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:47:04] 2025-11-23 01:46:12,575 | INFO     | time since job start (9689s) is within the limit (172800.0s)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,899 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 20:47:04] 2025-11-23 01:46:13,903 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-22 20:47:04] 2025-11-23 01:46:13,906 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894052070/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,906 | INFO     | extracted standard info from prmon json
[2025-11-22 20:47:04] 2025-11-23 01:46:13,906 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:47:04] 2025-11-23 01:46:13,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:47:04] 2025-11-23 01:46:13,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 20:47:04] 2025-11-23 01:46:13,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 20:47:04] 2025-11-23 01:46:13,910 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:47:04] 2025-11-23 01:46:13,910 | INFO     | sum of square deviations: 1246386160.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,911 | INFO     | sum of deviations: 25878696364.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,911 | INFO     | mean x: 1763857531.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,911 | INFO     | mean y: 2684248.062893082
[2025-11-22 20:47:04] 2025-11-23 01:46:13,911 | INFO     | intersect: -36620262105.98176
[2025-11-22 20:47:04] 2025-11-23 01:46:13,912 | INFO     | chi2: 2.1780840032565805
[2025-11-22 20:47:04] 2025-11-23 01:46:13,912 | INFO     | sum of square deviations: 1132458442.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | sum of deviations: 36187115674.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | mean x: 1763857378.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | mean y: 2697650.409090909
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | intersect: -56360439921.50215
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | chi2: 1.3926408226583575
[2025-11-22 20:47:04] 2025-11-23 01:46:13,913 | INFO     | current chi2=1.3926408226583575 (change=36.06119779695645 %)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,914 | INFO     | sum of square deviations: 1025693650.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,914 | INFO     | sum of deviations: 34845028475.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | mean x: 1763857226.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | mean y: 2695732.765100671
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | intersect: -59919343626.45733
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | chi2: 1.3919659883689883
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | current chi2=1.3919659883689883 (change=0.04845716701604679 %)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,915 | INFO     | right removable region: 148
[2025-11-22 20:47:04] 2025-11-23 01:46:13,916 | INFO     | sum of square deviations: 1132458442.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,916 | INFO     | sum of deviations: 665239312.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,916 | INFO     | mean x: 1763857683.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,916 | INFO     | mean y: 2717539.590909091
[2025-11-22 20:47:04] 2025-11-23 01:46:13,917 | INFO     | intersect: -1033424210.6785562
[2025-11-22 20:47:04] 2025-11-23 01:46:13,917 | INFO     | chi2: 0.8777290172066329
[2025-11-22 20:47:04] 2025-11-23 01:46:13,917 | INFO     | current chi2=0.8777290172066329 (change=59.70178303985112 %)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,917 | INFO     | sum of square deviations: 1025693650.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,918 | INFO     | sum of deviations: -5770344837.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,918 | INFO     | mean x: 1763857836.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,918 | INFO     | mean y: 2726680.174496644
[2025-11-22 20:47:04] 2025-11-23 01:46:13,918 | INFO     | intersect: 9925833796.187735
[2025-11-22 20:47:04] 2025-11-23 01:46:13,919 | INFO     | chi2: 0.8086498064657837
[2025-11-22 20:47:04] 2025-11-23 01:46:13,919 | INFO     | current chi2=0.8086498064657837 (change=7.870220693021334 %)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,919 | INFO     | left removable region: 20
[2025-11-22 20:47:04] 2025-11-23 01:46:13,919 | INFO     | sum of square deviations: 650252192.0
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | sum of deviations: 2239504010.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | mean x: 1763857805.5
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | mean y: 2746190.7421875
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | intersect: -6072076282.70359
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | chi2: 0.000991238016196257
[2025-11-22 20:47:04] 2025-11-23 01:46:13,920 | INFO     | current memory leak: 3.44 B/s (using 128 data points, chi2=0.00)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | could have reported an average CPU frequency of 2267 MHz (9 samples)
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | ..............................
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . Timing measurements:
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . get job = 0 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . initial setup = 2 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . payload setup = 7 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . stage-in = 0 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,921 | INFO     | . payload execution = 9655 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,922 | INFO     | . stage-out = 0 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,922 | INFO     | . log creation = 0 s
[2025-11-22 20:47:04] 2025-11-23 01:46:13,922 | INFO     | ..............................
[2025-11-22 20:47:04] 2025-11-23 01:46:14,005 | INFO     | 
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | job summary report
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | --------------------------------------------------
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | PanDA job id: 6894052070
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | task id: 47523659
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | errors: (none)
[2025-11-22 20:47:04] 2025-11-23 01:46:14,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | pilot state: finished 
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | transexitcode: 0
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | exeerrorcode: 0
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | exeerrordiag: 
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | exitcode: 0
[2025-11-22 20:47:04] 2025-11-23 01:46:14,007 | INFO     | exitmsg: OK
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | cpuconsumptiontime: 107468 s
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | nevents: 400
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | neventsw: 0
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | pid: 19620
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | pgrp: 19620
[2025-11-22 20:47:04] 2025-11-23 01:46:14,008 | INFO     | corecount: 12
[2025-11-22 20:47:04] 2025-11-23 01:46:14,009 | INFO     | event service: False
[2025-11-22 20:47:04] 2025-11-23 01:46:14,009 | INFO     | sizes: {0: 2298442, 5: 2298704, 11: 2298760, 9665: 2327205, 9666: 2336259, 9674: 2336461}
[2025-11-22 20:47:04] 2025-11-23 01:46:14,009 | INFO     | --------------------------------------------------
[2025-11-22 20:47:04] 2025-11-23 01:46:14,009 | INFO     | 
[2025-11-22 20:47:04] 2025-11-23 01:46:14,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 20:47:04] 2025-11-23 01:46:14,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:47:04] 2025-11-23 01:46:14,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:47:04] 2025-11-23 01:46:14,038 | INFO     | job 6894052070 has completed (purged errors)
[2025-11-22 20:47:04] 2025-11-23 01:46:14,038 | INFO     | overall cleanup function is called
[2025-11-22 20:47:04] 2025-11-23 01:46:15,047 | INFO     | --- collectZombieJob: --- 10, [19620]
[2025-11-22 20:47:04] 2025-11-23 01:46:15,047 | INFO     | zombie collector waiting for pid 19620
[2025-11-22 20:47:04] 2025-11-23 01:46:15,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:47:04] 2025-11-23 01:46:15,047 | INFO     | collected zombie processes
[2025-11-22 20:47:04] 2025-11-23 01:46:15,048 | INFO     | will attempt to kill all subprocesses of pid=19620
[2025-11-22 20:47:04] 2025-11-23 01:46:15,138 | INFO     | process IDs to be killed: [19620] (in reverse order)
[2025-11-22 20:47:04] 2025-11-23 01:46:15,193 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:47:04] 2025-11-23 01:46:15,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:47:04] 2025-11-23 01:46:15,196 | INFO     | did not find any defunct processes belonging to 19620
[2025-11-22 20:47:04] 2025-11-23 01:46:15,199 | INFO     | did not find any defunct processes belonging to 19620
[2025-11-22 20:47:04] 2025-11-23 01:46:15,201 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:47:04] 2025-11-23 01:46:15,201 | INFO     | ready for new job
[2025-11-22 20:47:04] 2025-11-23 01:46:15,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:47:04] 2025-11-23 01:46:15,203 | INFO     | ***************************************
[2025-11-22 20:47:04] 2025-11-23 01:46:15,203 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:47:04] 2025-11-23 01:46:15,203 | INFO     | ***************************************
[2025-11-22 20:47:04] 2025-11-23 01:46:15,203 | INFO     | 
[2025-11-22 20:47:04] 2025-11-23 01:46:15,204 | INFO     | architecture information:
[2025-11-22 20:47:04] 2025-11-23 01:46:15,205 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:47:04] 2025-11-23 01:46:15,219 | INFO     | cat /etc/os-release:
[2025-11-22 20:47:04] NAME="CentOS Linux"
[2025-11-22 20:47:04] VERSION="7 (Core)"
[2025-11-22 20:47:04] ID="centos"
[2025-11-22 20:47:04] ID_LIKE="rhel fedora"
[2025-11-22 20:47:04] VERSION_ID="7"
[2025-11-22 20:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:47:04] ANSI_COLOR="0;31"
[2025-11-22 20:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:47:04] HOME_URL="https://www.centos.org/"
[2025-11-22 20:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:47:04] 
[2025-11-22 20:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:47:04] 
[2025-11-22 20:47:04] 2025-11-23 01:46:15,219 | INFO     | ***************************************
[2025-11-22 20:47:04] 2025-11-23 01:46:15,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 20:47:04] 2025-11-23 01:46:15,739 | INFO     | sufficient remaining disk space (29069672448 B)
[2025-11-22 20:47:04] 2025-11-23 01:46:15,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:47:04] 2025-11-23 01:46:15,740 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:47:04] 2025-11-23 01:46:15,740 | INFO     | update_server=False
[2025-11-22 20:47:04] 2025-11-23 01:46:15,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:47:04] 2025-11-23 01:46:15,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:47:04] 2025-11-23 01:46:15,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:47:04] 2025-11-23 01:46:15,741 | INFO     | aborting loop
[2025-11-22 20:47:04] 2025-11-23 01:46:16,169 | INFO     | all job control threads have been joined
[2025-11-22 20:47:04] 2025-11-23 01:46:16,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:47:04] 2025-11-23 01:46:16,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:47:04] 2025-11-23 01:46:16,721 | INFO     | all data control threads have been joined
[2025-11-22 20:47:04] 2025-11-23 01:46:16,746 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:16,746 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:16,747 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:16,817 | INFO     | all payload control threads have been joined
[2025-11-22 20:47:04] 2025-11-23 01:46:16,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,174 | INFO     | [job] control thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,363 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,597 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,605 | INFO     | [job] validate thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,726 | INFO     | [data] control thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,744 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:17,823 | INFO     | [payload] control thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:18,050 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:18,153 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:18,168 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:18,643 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:20,721 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:47:04] 2025-11-23 01:46:45,780 | INFO     | PID=12617 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 20:47:04] 2025-11-23 01:46:45,780 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:47:04] 2025-11-23 01:46:45,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:47:04] 2025-11-23 01:46:45,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:47:04] 2025-11-23 01:46:58,779 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:47:04] 2025-11-23 01:46:59,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063399688000)>', '<ExcThread(monitor, started 140062213785344)>']
[2025-11-22 20:47:04] 2025-11-23 01:46:59,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:47:04] 2025-11-23 01:46:59,848 | INFO     | [monitor] control thread has ended
[2025-11-22 20:47:04] 2025-11-23 01:47:04,260 | INFO     | all workflow threads have been joined
[2025-11-22 20:47:04] 2025-11-23 01:47:04,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:47:04] 2025-11-23 01:47:04,269 | INFO     | traces error code: 0
[2025-11-22 20:47:04] 2025-11-23 01:47:04,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:47:04] 2025-11-23 01:47:04,364 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:47:04] 2025-11-23 01:47:04,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:47:04] 2025-11-23 01:47:04,372 [wrapper] pilotpid: 12617
[2025-11-22 20:47:04] 2025-11-23 01:47:04,376 [wrapper] Pilot exit status: 0
[2025-11-22 20:47:04] 2025-11-23 01:47:04,392 [wrapper] pandaids: 6894052070
[2025-11-22 20:47:04] 2025-11-23 01:47:04,437 [wrapper] cleanup supervisor_pilot  5658 12618
[2025-11-22 20:47:04] 2025-11-23 01:47:04,441 [wrapper] Test setup, not cleaning
[2025-11-22 20:47:04] 2025-11-23 01:47:04,445 [wrapper] apfmon messages muted
[2025-11-22 20:47:04] 2025-11-23 01:47:04,449 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:47:04] 2025-11-23 01:47:04,453 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:47:04]  *** Error codes and diagnostics ***
[2025-11-22 20:47:04]     "exeErrorCode": 0,
[2025-11-22 20:47:04]     "exeErrorDiag": "",
[2025-11-22 20:47:04]     "pilotErrorCode": 0,
[2025-11-22 20:47:04]     "pilotErrorDiag": "",
[2025-11-22 20:47:04]  *** Listing of results directory ***
[2025-11-22 20:47:04] total 613460
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 20:28 pilot3.tar.gz
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 20:29 queuedata.json
[2025-11-22 20:47:04] -rwx------ 1 boincer umatlas     36292 Nov 21 20:30 runpilot2-wrapper.sh
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas       100 Nov 22 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:47:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 18:04 run_atlas
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas       105 Nov 22 18:04 job.xml
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas 301771097 Nov 22 18:04 EVNT.47523657._000002.pool.root.1
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:04 start_atlas.sh
[2025-11-22 20:47:04] drwxrwx--x 2 boincer umatlas      4096 Nov 22 18:04 shared
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas    589946 Nov 22 18:04 input.tar.gz
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas         0 Nov 22 18:04 boinc_lockfile
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas      2613 Nov 22 18:04 pandaJob.out
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas        57 Nov 22 18:04 setup.sh.local
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas    989784 Nov 22 18:04 agis_schedconf.cvmfs.json
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas   1526164 Nov 22 18:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:47:04] drwx------ 5 boincer umatlas      4096 Nov 22 18:04 pilot3
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas 318847067 Nov 22 20:45 HITS.47523659._000044.pool.root.1
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 20:45 init_data.xml
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas       530 Nov 22 20:45 boinc_task_state.xml
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas        95 Nov 22 20:45 pilot_heartbeat.json
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas      1050 Nov 22 20:46 memory_monitor_summary.json
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas    465522 Nov 22 20:46 log.47523659._000044.job.log.tgz.1
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas      7844 Nov 22 20:46 heartbeat.json
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 20:46 boinc_mmap_file
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas        28 Nov 22 20:46 wrapper_checkpoint.txt
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas      4746 Nov 22 20:47 pilotlog.txt
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas   1357144 Nov 22 20:47 log.47523659._000044.job.log.1
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas       357 Nov 22 20:47 output.list
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas       620 Nov 22 20:47 runtime_log
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas   1843200 Nov 22 20:47 result.tar.gz
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas      9344 Nov 22 20:47 runtime_log.err
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas       663 Nov 22 20:47 Ho3MDmvdrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2pJKDmkVpvVm.diag
[2025-11-22 20:47:04] -rw-r--r-- 1 boincer umatlas     21149 Nov 22 20:47 stderr.txt
[2025-11-22 20:47:04] HITS file was successfully produced:
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas 318847067 Nov 22 20:45 shared/HITS.pool.root.1
[2025-11-22 20:47:04]  *** Contents of shared directory: ***
[2025-11-22 20:47:04] total 608476
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas 301771097 Nov 22 18:04 ATLAS.root_0
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 18:04 start_atlas.sh
[2025-11-22 20:47:04] -rw-r--r-- 2 boincer umatlas    589946 Nov 22 18:04 input.tar.gz
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas 318847067 Nov 22 20:45 HITS.pool.root.1
[2025-11-22 20:47:04] -rw------- 1 boincer umatlas   1843200 Nov 22 20:47 result.tar.gz
20:47:05 (8926): run_atlas exited; CPU time 107443.640100
20:47:05 (8926): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN