Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:48 (2509956): wrapper (7.7.26015): starting
18:54:48 (2509956): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 18:54:48] Arguments: --nthreads 9
[2025-11-22 18:54:48] Threads: 9
[2025-11-22 18:54:48] Checking for CVMFS
[2025-11-22 18:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:54:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:54:49] 2.13.2.0 7688 27837 187060 153190 3 343 30817475 39288833 8137 16776704 0 17986696 99.627 17351356 35814 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:54:49] CVMFS is ok
[2025-11-22 18:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:54:49] Further information can be found at the LHC@home message board.
[2025-11-22 18:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:54:49] Checking for apptainer binary...
[2025-11-22 18:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:54:49] Running /usr/bin/apptainer --version
[2025-11-22 18:54:50] apptainer version 1.4.4-1.el9
[2025-11-22 18:54:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:54:50] c-210-1.aglt2.org
[2025-11-22 18:54:50] apptainer works
[2025-11-22 18:54:50] Set ATHENA_PROC_NUMBER=9
[2025-11-22 18:54:50] Set ATHENA_CORE_NUMBER=9
[2025-11-22 18:54:50] Starting ATLAS job with PandaID=6894052069
[2025-11-22 18:54:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:30:45]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:30:45] 2025-11-23 12:28:28,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 07:30:45] 2025-11-23 12:28:28,995 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 07:30:45] 2025-11-23 12:28:29,001 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9208000000003
[2025-11-23 07:30:45] 2025-11-23 12:28:29,007 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894052069/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,008 | INFO     | extracted standard info from prmon json
[2025-11-23 07:30:45] 2025-11-23 12:28:29,008 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 07:30:45] 2025-11-23 12:28:29,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 07:30:45] 2025-11-23 12:28:29,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 07:30:45] 2025-11-23 12:28:29,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 07:30:45] 2025-11-23 12:28:29,021 | INFO     | fitting pss+swap vs Time
[2025-11-23 07:30:45] 2025-11-23 12:28:29,022 | INFO     | sum of square deviations: 125662877133.74446
[2025-11-23 07:30:45] 2025-11-23 12:28:29,035 | INFO     | sum of deviations: 137419451270.21356
[2025-11-23 07:30:45] 2025-11-23 12:28:29,035 | INFO     | mean x: 1763878303.1527028
[2025-11-23 07:30:45] 2025-11-23 12:28:29,036 | INFO     | mean y: 2638426.343243243
[2025-11-23 07:30:45] 2025-11-23 12:28:29,036 | INFO     | intersect: -1926262089.5083878
[2025-11-23 07:30:45] 2025-11-23 12:28:29,037 | INFO     | chi2: 2.4976722007886023
[2025-11-23 07:30:45] 2025-11-23 12:28:29,038 | INFO     | sum of square deviations: 123133398049.99466
[2025-11-23 07:30:45] 2025-11-23 12:28:29,058 | INFO     | sum of deviations: 191700913692.61215
[2025-11-23 07:30:45] 2025-11-23 12:28:29,058 | INFO     | mean x: 1763878150.6639457
[2025-11-23 07:30:45] 2025-11-23 12:28:29,059 | INFO     | mean y: 2641680.3061224488
[2025-11-23 07:30:45] 2025-11-23 12:28:29,059 | INFO     | intersect: -2743461801.6056075
[2025-11-23 07:30:45] 2025-11-23 12:28:29,060 | INFO     | chi2: 1.6147097156795929
[2025-11-23 07:30:45] 2025-11-23 12:28:29,060 | INFO     | current chi2=1.6147097156795929 (change=35.351415803492046 %)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,061 | INFO     | sum of square deviations: 120637703713.60124
[2025-11-23 07:30:45] 2025-11-23 12:28:29,073 | INFO     | sum of deviations: 190037476162.53958
[2025-11-23 07:30:45] 2025-11-23 12:28:29,074 | INFO     | mean x: 1763877998.1630137
[2025-11-23 07:30:45] 2025-11-23 12:28:29,074 | INFO     | mean y: 2641578.8273972603
[2025-11-23 07:30:45] 2025-11-23 12:28:29,074 | INFO     | intersect: -2775950127.670241
[2025-11-23 07:30:45] 2025-11-23 12:28:29,075 | INFO     | chi2: 1.6146895696880796
[2025-11-23 07:30:45] 2025-11-23 12:28:29,075 | INFO     | current chi2=1.6146895696880796 (change=0.0012476540716640733 %)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,075 | INFO     | right removable region: 729
[2025-11-23 07:30:45] 2025-11-23 12:28:29,076 | INFO     | sum of square deviations: 123132652019.9947
[2025-11-23 07:30:45] 2025-11-23 12:28:29,088 | INFO     | sum of deviations: 8168101781.9550705
[2025-11-23 07:30:45] 2025-11-23 12:28:29,089 | INFO     | mean x: 1763878455.6639457
[2025-11-23 07:30:45] 2025-11-23 12:28:29,089 | INFO     | mean y: 2646195.47755102
[2025-11-23 07:30:45] 2025-11-23 12:28:29,089 | INFO     | intersect: -114362075.85019793
[2025-11-23 07:30:45] 2025-11-23 12:28:29,090 | INFO     | chi2: 1.0062455229128067
[2025-11-23 07:30:45] 2025-11-23 12:28:29,090 | INFO     | current chi2=1.0062455229128067 (change=59.71266675446443 %)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,091 | INFO     | sum of square deviations: 120636613593.55647
[2025-11-23 07:30:45] 2025-11-23 12:28:29,105 | INFO     | sum of deviations: 2894735890.5891113
[2025-11-23 07:30:45] 2025-11-23 12:28:29,105 | INFO     | mean x: 1763878608.1753426
[2025-11-23 07:30:45] 2025-11-23 12:28:29,105 | INFO     | mean y: 2646517.6438356163
[2025-11-23 07:30:45] 2025-11-23 12:28:29,105 | INFO     | intersect: -39678631.92419118
[2025-11-23 07:30:45] 2025-11-23 12:28:29,106 | INFO     | chi2: 1.0050371134359257
[2025-11-23 07:30:45] 2025-11-23 12:28:29,106 | INFO     | current chi2=1.0050371134359257 (change=0.1200909171136413 %)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,106 | INFO     | left removable region: 20
[2025-11-23 07:30:45] 2025-11-23 12:28:29,107 | INFO     | sum of square deviations: 110523578365.73775
[2025-11-23 07:30:45] 2025-11-23 12:28:29,120 | INFO     | sum of deviations: 97309869169.39078
[2025-11-23 07:30:45] 2025-11-23 12:28:29,120 | INFO     | mean x: 1763878577.674189
[2025-11-23 07:30:45] 2025-11-23 12:28:29,120 | INFO     | mean y: 2647248.114245416
[2025-11-23 07:30:45] 2025-11-23 12:28:29,120 | INFO     | intersect: -1550349824.2043576
[2025-11-23 07:30:45] 2025-11-23 12:28:29,121 | INFO     | chi2: 0.007884767334683837
[2025-11-23 07:30:45] 2025-11-23 12:28:29,121 | INFO     | current memory leak: 0.88 B/s (using 709 data points, chi2=0.01)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,122 | INFO     | could have reported an average CPU frequency of 2599 MHz (28 samples)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,122 | INFO     | ..............................
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . Timing measurements:
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . get job = 0 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . initial setup = 3 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . payload setup = 17 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . stage-in = 0 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . payload execution = 45140 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . stage-out = 3 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | . log creation = 0 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,123 | INFO     | ..............................
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | 
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | job summary report
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | --------------------------------------------------
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | PanDA job id: 6894052069
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | task id: 47523659
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | errors: (none)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | pilot state: finished 
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | transexitcode: 0
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | exeerrorcode: 0
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | exeerrordiag: 
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | exitcode: 0
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | exitmsg: OK
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | cpuconsumptiontime: 116242 s
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | nevents: 400
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | neventsw: 0
[2025-11-23 07:30:45] 2025-11-23 12:28:29,231 | INFO     | pid: 2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | pgrp: 2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | corecount: 9
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | event service: False
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | sizes: {0: 2298215, 1: 2298470, 2: 2298498, 11: 2298760, 13: 2298788, 45158: 2343779, 45163: 2352805, 45165: 2352861, 45174: 2353055}
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | --------------------------------------------------
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | 
[2025-11-23 07:30:45] 2025-11-23 12:28:29,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 07:30:45] 2025-11-23 12:28:29,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,258 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,258 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 07:30:45] 2025-11-23 12:28:29,258 | INFO     | job 6894052069 has completed (purged errors)
[2025-11-23 07:30:45] 2025-11-23 12:28:29,258 | INFO     | overall cleanup function is called
[2025-11-23 07:30:45] 2025-11-23 12:28:30,268 | INFO     | --- collectZombieJob: --- 10, [2521367]
[2025-11-23 07:30:45] 2025-11-23 12:28:30,268 | INFO     | zombie collector waiting for pid 2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:30,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 07:30:45] 2025-11-23 12:28:30,268 | INFO     | collected zombie processes
[2025-11-23 07:30:45] 2025-11-23 12:28:30,269 | INFO     | will attempt to kill all subprocesses of pid=2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:30,507 | INFO     | process IDs to be killed: [2521367] (in reverse order)
[2025-11-23 07:30:45] 2025-11-23 12:28:30,612 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 07:30:45] 2025-11-23 12:28:30,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 07:30:45] 2025-11-23 12:28:30,621 | INFO     | did not find any defunct processes belonging to 2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:30,630 | INFO     | did not find any defunct processes belonging to 2521367
[2025-11-23 07:30:45] 2025-11-23 12:28:30,632 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 07:30:45] 2025-11-23 12:28:30,632 | INFO     | ready for new job
[2025-11-23 07:30:45] 2025-11-23 12:28:30,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 07:30:45] 2025-11-23 12:28:30,636 | INFO     | ***************************************
[2025-11-23 07:30:45] 2025-11-23 12:28:30,637 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 07:30:45] 2025-11-23 12:28:30,637 | INFO     | ***************************************
[2025-11-23 07:30:45] 2025-11-23 12:28:30,637 | INFO     | 
[2025-11-23 07:30:45] 2025-11-23 12:28:30,639 | INFO     | architecture information:
[2025-11-23 07:30:45] 2025-11-23 12:28:30,639 | INFO     | executing command: cat /etc/os-release
[2025-11-23 07:30:45] 2025-11-23 12:28:30,656 | INFO     | cat /etc/os-release:
[2025-11-23 07:30:45] NAME="CentOS Linux"
[2025-11-23 07:30:45] VERSION="7 (Core)"
[2025-11-23 07:30:45] ID="centos"
[2025-11-23 07:30:45] ID_LIKE="rhel fedora"
[2025-11-23 07:30:45] VERSION_ID="7"
[2025-11-23 07:30:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 07:30:45] ANSI_COLOR="0;31"
[2025-11-23 07:30:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 07:30:45] HOME_URL="https://www.centos.org/"
[2025-11-23 07:30:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 07:30:45] 
[2025-11-23 07:30:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 07:30:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 07:30:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 07:30:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 07:30:45] 
[2025-11-23 07:30:45] 2025-11-23 12:28:30,657 | INFO     | ***************************************
[2025-11-23 07:30:45] 2025-11-23 12:28:31,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 07:30:45] 2025-11-23 12:28:31,200 | INFO     | sufficient remaining disk space (49682579456 B)
[2025-11-23 07:30:45] 2025-11-23 12:28:31,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:30:45] 2025-11-23 12:28:31,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:30:45] 2025-11-23 12:28:31,201 | INFO     | update_server=False
[2025-11-23 07:30:45] 2025-11-23 12:28:31,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:30:45] 2025-11-23 12:28:31,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:30:45] 2025-11-23 12:28:31,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:30:45] 2025-11-23 12:28:31,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:30:45] 2025-11-23 12:28:31,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:30:45] 2025-11-23 12:28:31,593 | INFO     | aborting loop
[2025-11-23 07:30:45] 2025-11-23 12:28:32,065 | INFO     | all payload control threads have been joined
[2025-11-23 07:30:45] 2025-11-23 12:28:32,141 | INFO     | all job control threads have been joined
[2025-11-23 07:30:45] 2025-11-23 12:28:32,207 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,217 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,311 | INFO     | all data control threads have been joined
[2025-11-23 07:30:45] 2025-11-23 12:28:32,511 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,532 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,605 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:32,817 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,070 | INFO     | [payload] control thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,147 | INFO     | [job] control thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,160 | INFO     | [job] validate thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,208 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,317 | INFO     | [data] control thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,363 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,579 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:33,747 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:35,211 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:30:45] 2025-11-23 12:28:40,143 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:30:45] 2025-11-23 12:28:41,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128468117312)>', '<ExcThread(monitor, started 140127955293952)>']
[2025-11-23 07:30:45] 2025-11-23 12:28:46,267 | INFO     | all workflow threads have been joined
[2025-11-23 07:30:45] 2025-11-23 12:28:46,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:30:45] 2025-11-23 12:28:46,277 | INFO     | traces error code: 0
[2025-11-23 07:30:45] 2025-11-23 12:28:46,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:30:45] 2025-11-23 12:29:00,875 | INFO     | PID=2513745 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 07:30:45] 2025-11-23 12:29:00,875 | INFO     | .. there are 9 such processes running
[2025-11-23 07:30:45] 2025-11-23 12:29:00,875 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:30:45] 2025-11-23 12:29:00,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:30:45] 2025-11-23 12:29:00,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:30:45] 2025-11-23 12:29:00,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:30:45] 2025-11-23 12:29:00,876 | INFO     | [monitor] control thread has ended
[2025-11-23 07:30:45] 2025-11-23 12:29:01,013 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:30:45] 2025-11-23 12:29:01,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:30:45] 2025-11-23 12:29:01,018 [wrapper] pilotpid: 2513745
[2025-11-23 07:30:45] 2025-11-23 12:29:01,020 [wrapper] Pilot exit status: 0
[2025-11-23 07:30:45] 2025-11-23 12:29:01,036 [wrapper] pandaids: 6894052069
[2025-11-23 07:30:45] 2025-11-23 12:29:01,081 [wrapper] cleanup supervisor_pilot 3454228 2513746
[2025-11-23 07:30:45] 2025-11-23 12:29:01,089 [wrapper] Test setup, not cleaning
[2025-11-23 07:30:45] 2025-11-23 12:29:01,093 [wrapper] apfmon messages muted
[2025-11-23 07:30:45] 2025-11-23 12:29:01,096 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:30:45] 2025-11-23 12:29:01,099 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:30:45]  *** Error codes and diagnostics ***
[2025-11-23 07:30:45]     "exeErrorCode": 0,
[2025-11-23 07:30:45]     "exeErrorDiag": "",
[2025-11-23 07:30:45]     "pilotErrorCode": 0,
[2025-11-23 07:30:45]     "pilotErrorDiag": "",
[2025-11-23 07:30:45]  *** Listing of results directory ***
[2025-11-23 07:30:45] total 622116
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 20:28 pilot3.tar.gz
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 20:29 queuedata.json
[2025-11-23 07:30:45] -rwx------. 1 boincer umatlas     36292 Nov 21 20:30 runpilot2-wrapper.sh
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas       100 Nov 22 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:30:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 18:54 run_atlas
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas       105 Nov 22 18:54 job.xml
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas 301771097 Nov 22 18:54 EVNT.47523657._000002.pool.root.1
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:54 start_atlas.sh
[2025-11-23 07:30:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 18:54 shared
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas    589944 Nov 22 18:54 input.tar.gz
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas         0 Nov 22 18:54 boinc_lockfile
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas      2613 Nov 22 18:54 pandaJob.out
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas        57 Nov 22 18:54 setup.sh.local
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas    989784 Nov 22 18:55 agis_schedconf.cvmfs.json
[2025-11-23 07:30:45] drwx------. 5 boincer umatlas      4096 Nov 22 18:55 pilot3
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas 318580596 Nov 23 07:27 HITS.47523659._000043.pool.root.1
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas       532 Nov 23 07:27 boinc_task_state.xml
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas      1040 Nov 23 07:28 memory_monitor_summary.json
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas   1526164 Nov 23 07:28 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas    861510 Nov 23 07:28 log.47523659._000043.job.log.tgz.1
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas        95 Nov 23 07:28 pilot_heartbeat.json
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas      7814 Nov 23 07:28 heartbeat.json
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas       822 Nov 23 07:29 pilotlog.txt
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas   5527201 Nov 23 07:29 log.47523659._000043.job.log.1
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas       357 Nov 23 07:29 output.list
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas       620 Nov 23 07:29 runtime_log
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas   6410240 Nov 23 07:29 result.tar.gz
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 07:29 runtime_log.err
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas       663 Nov 23 07:29 Jm1MDmvdrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1pJKDmRizy8n.diag
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas      6662 Nov 23 07:30 init_data.xml
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 07:30 boinc_mmap_file
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas        29 Nov 23 07:30 wrapper_checkpoint.txt
[2025-11-23 07:30:45] -rw-r--r--. 1 boincer umatlas     21329 Nov 23 07:30 stderr.txt
[2025-11-23 07:30:45] HITS file was successfully produced:
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas 318580596 Nov 23 07:27 shared/HITS.pool.root.1
[2025-11-23 07:30:45]  *** Contents of shared directory: ***
[2025-11-23 07:30:45] total 612676
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas 301771097 Nov 22 18:54 ATLAS.root_0
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:54 start_atlas.sh
[2025-11-23 07:30:45] -rw-r--r--. 2 boincer umatlas    589944 Nov 22 18:54 input.tar.gz
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas 318580596 Nov 23 07:27 HITS.pool.root.1
[2025-11-23 07:30:45] -rw-------. 1 boincer umatlas   6410240 Nov 23 07:29 result.tar.gz
07:30:47 (2509956): run_atlas exited; CPU time 117204.680343
07:30:47 (2509956): called boinc_finish(0)

</stderr_txt>
]]>

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