Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:16 (1049394): wrapper (7.7.26015): starting
18:39:17 (1049394): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 18:39:17] Arguments: --nthreads 12
[2025-11-23 18:39:17] Threads: 12
[2025-11-23 18:39:17] Checking for CVMFS
[2025-11-23 18:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 18:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 18:39:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 18:39:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 18:39:17] 2.13.3.0 13543 3013 77384 153216 1 81 3307764 4097025 1044 130560 0 2333706 99.901 299261 16557 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 18:39:17] CVMFS is ok
[2025-11-23 18:39:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 18:39:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 18:39:17] Further information can be found at the LHC@home message board.
[2025-11-23 18:39:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 18:39:17] Checking for apptainer binary...
[2025-11-23 18:39:17] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-23 18:39:17] apptainer is not installed, using version from CVMFS
[2025-11-23 18:39:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 18:39:17] pckelar5.cern.ch
[2025-11-23 18:39:17] apptainer works
[2025-11-23 18:39:17] Set ATHENA_PROC_NUMBER=12
[2025-11-23 18:39:17] Set ATHENA_CORE_NUMBER=12
[2025-11-23 18:39:17] Starting ATLAS job with PandaID=6893935675
[2025-11-23 18:39:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:02:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:02:08] 2025-11-23 23:01:36,380 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.570291666667
[2025-11-24 00:02:08] 2025-11-23 23:01:36,385 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6893935675/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,386 | INFO     | extracted standard info from prmon json
[2025-11-24 00:02:08] 2025-11-23 23:01:36,386 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:02:08] 2025-11-23 23:01:36,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:02:08] 2025-11-23 23:01:36,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 00:02:08] 2025-11-23 23:01:36,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 00:02:08] 2025-11-23 23:01:36,396 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:02:08] 2025-11-23 23:01:36,397 | INFO     | sum of square deviations: 9877610318.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,401 | INFO     | sum of deviations: -7320954040.000008
[2025-11-24 00:02:08] 2025-11-23 23:01:36,401 | INFO     | mean x: 1763929239.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,401 | INFO     | mean y: 2810158.757097792
[2025-11-24 00:02:08] 2025-11-23 23:01:36,401 | INFO     | intersect: 1310175449.8334842
[2025-11-24 00:02:08] 2025-11-23 23:01:36,402 | INFO     | chi2: 2.517816823454364
[2025-11-24 00:02:08] 2025-11-23 23:01:36,403 | INFO     | sum of square deviations: 9417545878.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,406 | INFO     | sum of deviations: 15371875437.999992
[2025-11-24 00:02:08] 2025-11-23 23:01:36,406 | INFO     | mean x: 1763929086.5
[2025-11-24 00:02:08] 2025-11-23 23:01:36,406 | INFO     | mean y: 2817585.794871795
[2025-11-24 00:02:08] 2025-11-23 23:01:36,407 | INFO     | intersect: -2876371807.1111164
[2025-11-24 00:02:08] 2025-11-23 23:01:36,407 | INFO     | chi2: 1.8234201608385385
[2025-11-24 00:02:08] 2025-11-23 23:01:36,407 | INFO     | current chi2=1.8234201608385385 (change=27.57931618167264 %)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,407 | INFO     | sum of square deviations: 8971993338.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,409 | INFO     | sum of deviations: 15289185058.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,409 | INFO     | mean x: 1763928934.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,410 | INFO     | mean y: 2817557.5016286643
[2025-11-24 00:02:08] 2025-11-23 23:01:36,410 | INFO     | intersect: -3003095942.997971
[2025-11-24 00:02:08] 2025-11-23 23:01:36,410 | INFO     | chi2: 1.8238496488854261
[2025-11-24 00:02:08] 2025-11-23 23:01:36,410 | INFO     | current chi2=1.8238496488854261 (change=-0.023553981474575426 %)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,410 | INFO     | right removable region: 306
[2025-11-24 00:02:08] 2025-11-23 23:01:36,411 | INFO     | sum of square deviations: 9417545878.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | sum of deviations: -63902420778.5
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | mean x: 1763929391.5
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | mean y: 2828788.1634615385
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | intersect: 11971908595.092379
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | chi2: 1.0315402493267714
[2025-11-24 00:02:08] 2025-11-23 23:01:36,413 | INFO     | current chi2=1.0315402493267714 (change=59.03036949639843 %)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,414 | INFO     | sum of square deviations: 8971993338.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,416 | INFO     | sum of deviations: -74090649531.99998
[2025-11-24 00:02:08] 2025-11-23 23:01:36,416 | INFO     | mean x: 1763929544.0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,416 | INFO     | mean y: 2832275.381107492
[2025-11-24 00:02:08] 2025-11-23 23:01:36,416 | INFO     | intersect: 14569348401.749249
[2025-11-24 00:02:08] 2025-11-23 23:01:36,416 | INFO     | chi2: 0.9843966495755974
[2025-11-24 00:02:08] 2025-11-23 23:01:36,417 | INFO     | current chi2=0.9843966495755974 (change=4.5702142773335295 %)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,417 | INFO     | left removable region: 20
[2025-11-24 00:02:08] 2025-11-23 23:01:36,417 | INFO     | sum of square deviations: 7253894147.5
[2025-11-24 00:02:08] 2025-11-23 23:01:36,419 | INFO     | sum of deviations: -29740318901.499996
[2025-11-24 00:02:08] 2025-11-23 23:01:36,419 | INFO     | mean x: 1763929513.5
[2025-11-24 00:02:08] 2025-11-23 23:01:36,419 | INFO     | mean y: 2832858.8426573426
[2025-11-24 00:02:08] 2025-11-23 23:01:36,419 | INFO     | intersect: 7234786508.088783
[2025-11-24 00:02:08] 2025-11-23 23:01:36,419 | INFO     | chi2: 0.21057307471500603
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | current memory leak: -4.10 B/s (using 286 data points, chi2=0.21)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | could have reported an average CPU frequency of 2804 MHz (14 samples)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | ..............................
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | . Timing measurements:
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | . get job = 0 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | . initial setup = 1 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | . payload setup = 11 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,420 | INFO     | . stage-in = 0 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,421 | INFO     | . payload execution = 19287 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,421 | INFO     | . stage-out = 1 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,421 | INFO     | . log creation = 0 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,421 | INFO     | ..............................
[2025-11-24 00:02:08] 2025-11-23 23:01:36,667 | INFO     | 
[2025-11-24 00:02:08] 2025-11-23 23:01:36,667 | INFO     | job summary report
[2025-11-24 00:02:08] 2025-11-23 23:01:36,667 | INFO     | --------------------------------------------------
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | PanDA job id: 6893935675
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | task id: 47523642
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | errors: (none)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | pilot state: finished 
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | transexitcode: 0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,668 | INFO     | exeerrorcode: 0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | exeerrordiag: 
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | exitcode: 0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | exitmsg: OK
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | cpuconsumptiontime: 218833 s
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | nevents: 400
[2025-11-24 00:02:08] 2025-11-23 23:01:36,669 | INFO     | neventsw: 0
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | pid: 1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | pgrp: 1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | corecount: 12
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | event service: False
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | sizes: {0: 2297631, 1: 2298487, 2: 2298487, 6: 2298777, 12: 2298805, 19302: 2331450, 19304: 2340448, 19305: 2340504, 19312: 2340698}
[2025-11-24 00:02:08] 2025-11-23 23:01:36,670 | INFO     | --------------------------------------------------
[2025-11-24 00:02:08] 2025-11-23 23:01:36,671 | INFO     | 
[2025-11-24 00:02:08] 2025-11-23 23:01:36,671 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-24 00:02:08] 2025-11-23 23:01:36,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:02:08] 2025-11-23 23:01:36,695 | INFO     | job 6893935675 has completed (purged errors)
[2025-11-24 00:02:08] 2025-11-23 23:01:36,695 | INFO     | overall cleanup function is called
[2025-11-24 00:02:08] 2025-11-23 23:01:37,703 | INFO     | --- collectZombieJob: --- 10, [1060769]
[2025-11-24 00:02:08] 2025-11-23 23:01:37,703 | INFO     | zombie collector waiting for pid 1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:37,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:02:08] 2025-11-23 23:01:37,703 | INFO     | collected zombie processes
[2025-11-24 00:02:08] 2025-11-23 23:01:37,704 | INFO     | will attempt to kill all subprocesses of pid=1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:37,846 | INFO     | process IDs to be killed: [1060769] (in reverse order)
[2025-11-24 00:02:08] 2025-11-23 23:01:37,887 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:02:08] 2025-11-23 23:01:37,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:02:08] 2025-11-23 23:01:37,894 | INFO     | did not find any defunct processes belonging to 1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:37,900 | INFO     | did not find any defunct processes belonging to 1060769
[2025-11-24 00:02:08] 2025-11-23 23:01:37,901 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:02:08] 2025-11-23 23:01:37,901 | INFO     | ready for new job
[2025-11-24 00:02:08] 2025-11-23 23:01:37,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:02:08] 2025-11-23 23:01:37,904 | INFO     | ***************************************
[2025-11-24 00:02:08] 2025-11-23 23:01:37,904 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:02:08] 2025-11-23 23:01:37,904 | INFO     | ***************************************
[2025-11-24 00:02:08] 2025-11-23 23:01:37,904 | INFO     | 
[2025-11-24 00:02:08] 2025-11-23 23:01:37,906 | INFO     | architecture information:
[2025-11-24 00:02:08] 2025-11-23 23:01:37,906 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:02:08] 2025-11-23 23:01:37,918 | INFO     | cat /etc/os-release:
[2025-11-24 00:02:08] NAME="CentOS Linux"
[2025-11-24 00:02:08] VERSION="7 (Core)"
[2025-11-24 00:02:08] ID="centos"
[2025-11-24 00:02:08] ID_LIKE="rhel fedora"
[2025-11-24 00:02:08] VERSION_ID="7"
[2025-11-24 00:02:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:02:08] ANSI_COLOR="0;31"
[2025-11-24 00:02:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:02:08] HOME_URL="https://www.centos.org/"
[2025-11-24 00:02:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:02:08] 
[2025-11-24 00:02:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:02:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:02:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:02:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:02:08] 
[2025-11-24 00:02:08] 2025-11-23 23:01:37,919 | INFO     | ***************************************
[2025-11-24 00:02:08] 2025-11-23 23:01:38,422 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-24 00:02:08] 2025-11-23 23:01:38,440 | INFO     | sufficient remaining disk space (1813679964160 B)
[2025-11-24 00:02:08] 2025-11-23 23:01:38,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:02:08] 2025-11-23 23:01:38,440 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:02:08] 2025-11-23 23:01:38,440 | INFO     | update_server=False
[2025-11-24 00:02:08] 2025-11-23 23:01:38,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:02:08] 2025-11-23 23:01:38,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:02:08] 2025-11-23 23:01:38,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 00:02:08] 2025-11-23 23:01:38,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 00:02:08] 2025-11-23 23:01:38,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:02:08] 2025-11-23 23:01:38,707 | INFO     | will abort loop
[2025-11-24 00:02:08] 2025-11-23 23:01:38,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:02:08] 2025-11-23 23:01:39,094 | INFO     | all data control threads have been joined
[2025-11-24 00:02:08] 2025-11-23 23:01:39,102 | INFO     | all payload control threads have been joined
[2025-11-24 00:02:08] 2025-11-23 23:01:39,117 | INFO     | all job control threads have been joined
[2025-11-24 00:02:08] 2025-11-23 23:01:39,446 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:39,447 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:39,569 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:39,618 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:39,713 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:39,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:02:08] 2025-11-23 23:01:39,989 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,050 | INFO     | [job] validate thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,100 | INFO     | [data] control thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,107 | INFO     | [payload] control thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,121 | INFO     | [job] control thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,569 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,738 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:40,876 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:41,008 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:43,857 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:02:08] 2025-11-23 23:01:59,185 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:02:08] 2025-11-23 23:02:00,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710169085760)>', '<ExcThread(monitor, started 139709607028480)>']
[2025-11-24 00:02:08] 2025-11-23 23:02:05,172 | INFO     | all workflow threads have been joined
[2025-11-24 00:02:08] 2025-11-23 23:02:05,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:02:08] 2025-11-23 23:02:05,173 | INFO     | traces error code: 0
[2025-11-24 00:02:08] 2025-11-23 23:02:05,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:02:08] 2025-11-23 23:02:08,339 | INFO     | PID=1053239 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:02:08] 2025-11-23 23:02:08,339 | INFO     | .. there are 2 such processes running
[2025-11-24 00:02:08] 2025-11-23 23:02:08,340 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:02:08] 2025-11-23 23:02:08,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:02:08] 2025-11-23 23:02:08,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:02:08] 2025-11-23 23:02:08,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:02:08] 2025-11-23 23:02:08,340 | INFO     | [monitor] control thread has ended
[2025-11-24 00:02:08] 2025-11-23 23:02:08,447 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:02:08] 2025-11-23 23:02:08,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:02:08] 2025-11-23 23:02:08,453 [wrapper] pilotpid: 1053239
[2025-11-24 00:02:08] 2025-11-23 23:02:08,455 [wrapper] Pilot exit status: 0
[2025-11-24 00:02:08] 2025-11-23 23:02:08,465 [wrapper] pandaids: 6893935675
[2025-11-24 00:02:08] 2025-11-23 23:02:08,502 [wrapper] cleanup supervisor_pilot 1154712 1053240
[2025-11-24 00:02:08] 2025-11-23 23:02:08,505 [wrapper] Test setup, not cleaning
[2025-11-24 00:02:08] 2025-11-23 23:02:08,508 [wrapper] apfmon messages muted
[2025-11-24 00:02:08] 2025-11-23 23:02:08,511 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:02:08] 2025-11-23 23:02:08,513 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:02:08]  *** Error codes and diagnostics ***
[2025-11-24 00:02:08]     "exeErrorCode": 0,
[2025-11-24 00:02:08]     "exeErrorDiag": "",
[2025-11-24 00:02:08]     "pilotErrorCode": 0,
[2025-11-24 00:02:08]     "pilotErrorDiag": "",
[2025-11-24 00:02:08]  *** Listing of results directory ***
[2025-11-24 00:02:08] total 624900
[2025-11-24 00:02:08] -rwx------ 1 boinc boinc     36292 Nov 21 15:45 runpilot2-wrapper.sh
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc    576529 Nov 21 15:45 pilot3.tar.gz
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc      5112 Nov 21 15:45 queuedata.json
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc       100 Nov 23 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:02:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 18:39 run_atlas
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc       105 Nov 23 18:39 job.xml
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc      6296 Nov 23 18:39 init_data.xml
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc 293493793 Nov 23 18:39 EVNT.47523640._000003.pool.root.1
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc     15847 Nov 23 18:39 start_atlas.sh
[2025-11-24 00:02:08] drwxrwx--x 2 boinc boinc        68 Nov 23 18:39 shared
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc    589952 Nov 23 18:39 input.tar.gz
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc         0 Nov 23 18:39 boinc_lockfile
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc      2630 Nov 23 18:39 pandaJob.out
[2025-11-24 00:02:08] -rw------- 1 boinc boinc    989786 Nov 23 18:39 agis_schedconf.cvmfs.json
[2025-11-24 00:02:08] drwx------ 5 boinc boinc      4096 Nov 23 18:39 pilot3
[2025-11-24 00:02:08] -rw------- 1 boinc boinc 335993358 Nov 24 00:00 HITS.47523642._000059.pool.root.1
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc       532 Nov 24 00:00 boinc_task_state.xml
[2025-11-24 00:02:08] -rw------- 1 boinc boinc      1021 Nov 24 00:01 memory_monitor_summary.json
[2025-11-24 00:02:08] -rw------- 1 boinc boinc        95 Nov 24 00:01 pilot_heartbeat.json
[2025-11-24 00:02:08] -rw------- 1 boinc boinc   1526164 Nov 24 00:01 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:02:08] -rw------- 1 boinc boinc    587793 Nov 24 00:01 log.47523642._000059.job.log.tgz.1
[2025-11-24 00:02:08] -rw------- 1 boinc boinc      7789 Nov 24 00:01 heartbeat.json
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc      8192 Nov 24 00:01 boinc_mmap_file
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc        29 Nov 24 00:01 wrapper_checkpoint.txt
[2025-11-24 00:02:08] -rw------- 1 boinc boinc       822 Nov 24 00:02 pilotlog.txt
[2025-11-24 00:02:08] -rw------- 1 boinc boinc   2665413 Nov 24 00:02 log.47523642._000059.job.log.1
[2025-11-24 00:02:08] -rw------- 1 boinc boinc       357 Nov 24 00:02 output.list
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc       620 Nov 24 00:02 runtime_log
[2025-11-24 00:02:08] -rw------- 1 boinc boinc   3276800 Nov 24 00:02 result.tar.gz
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc      8842 Nov 24 00:02 runtime_log.err
[2025-11-24 00:02:08] -rw------- 1 boinc boinc       662 Nov 24 00:02 bhqKDmBZhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhgHKDm6hm01m.diag
[2025-11-24 00:02:08] -rw-r--r-- 1 boinc boinc     21341 Nov 24 00:02 stderr.txt
[2025-11-24 00:02:08] HITS file was successfully produced:
[2025-11-24 00:02:08] -rw------- 1 boinc boinc 335993358 Nov 24 00:00 shared/HITS.pool.root.1
[2025-11-24 00:02:08]  *** Contents of shared directory: ***
[2025-11-24 00:02:08] total 618536
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc 293493793 Nov 23 18:39 ATLAS.root_0
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc     15847 Nov 23 18:39 start_atlas.sh
[2025-11-24 00:02:08] -rw-r--r-- 2 boinc boinc    589952 Nov 23 18:39 input.tar.gz
[2025-11-24 00:02:08] -rw------- 1 boinc boinc 335993358 Nov 24 00:00 HITS.pool.root.1
[2025-11-24 00:02:08] -rw------- 1 boinc boinc   3276800 Nov 24 00:02 result.tar.gz
00:02:09 (1049394): run_atlas exited; CPU time 219261.629886
00:02:09 (1049394): called boinc_finish(0)

</stderr_txt>
]]>

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