Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:56:23 (2597705): wrapper (7.7.26015): starting
23:56:23 (2597705): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:56:23] Arguments: --nthreads 8
[2025-11-22 23:56:23] Threads: 8
[2025-11-22 23:56:23] Checking for CVMFS
[2025-11-22 23:56:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:56:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:56:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:56:25] 2.13.3.0 11771 25232 264844 153197 3 634 28890462 32935936 34416 16776704 0 180545800 99.612 183920405 38802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 23:56:25] CVMFS is ok
[2025-11-22 23:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:56:25] Further information can be found at the LHC@home message board.
[2025-11-22 23:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:56:25] Checking for apptainer binary...
[2025-11-22 23:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:56:25] Running /usr/bin/apptainer --version
[2025-11-22 23:56:26] apptainer version 1.4.4-1.el9
[2025-11-22 23:56:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:56:26] c7-2-14.aglt2.org
[2025-11-22 23:56:26] apptainer works
[2025-11-22 23:56:26] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:56:26] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:56:26] Starting ATLAS job with PandaID=6893887701
[2025-11-22 23:56:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:01:20]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:01:20] 2025-11-24 04:00:42,596 | INFO     | sum of deviations: 4133598865210.0283
[2025-11-23 23:01:20] 2025-11-24 04:00:42,596 | INFO     | mean x: 1763915412.1332843
[2025-11-23 23:01:20] 2025-11-24 04:00:42,597 | INFO     | mean y: 2880203.585419735
[2025-11-23 23:01:20] 2025-11-24 04:00:42,597 | INFO     | intersect: -9386691400.278893
[2025-11-23 23:01:20] 2025-11-24 04:00:42,605 | INFO     | chi2: 13.168220456224143
[2025-11-23 23:01:20] 2025-11-24 04:00:42,607 | INFO     | sum of square deviations: 767988249929.9879
[2025-11-23 23:01:20] 2025-11-24 04:00:42,878 | INFO     | sum of deviations: 4547517680387.905
[2025-11-23 23:01:20] 2025-11-24 04:00:42,878 | INFO     | mean x: 1763915259.6393201
[2025-11-23 23:01:20] 2025-11-24 04:00:42,878 | INFO     | mean y: 2887587.06947524
[2025-11-23 23:01:20] 2025-11-24 04:00:42,878 | INFO     | intersect: -10441850116.465818
[2025-11-23 23:01:20] 2025-11-24 04:00:42,879 | INFO     | chi2: 10.550734292965892
[2025-11-23 23:01:20] 2025-11-24 04:00:42,879 | INFO     | current chi2=10.550734292965892 (change=19.877296039808172 %)
[2025-11-23 23:01:20] 2025-11-24 04:00:42,880 | INFO     | right removable region: 1352
[2025-11-23 23:01:20] 2025-11-24 04:00:42,881 | INFO     | sum of square deviations: 767986896949.988
[2025-11-23 23:01:20] 2025-11-24 04:00:42,992 | INFO     | sum of deviations: 3556858270998.4756
[2025-11-23 23:01:20] 2025-11-24 04:00:42,993 | INFO     | mean x: 1763915564.6393201
[2025-11-23 23:01:20] 2025-11-24 04:00:42,993 | INFO     | mean y: 2890493.9948263117
[2025-11-23 23:01:20] 2025-11-24 04:00:42,993 | INFO     | intersect: -8166516679.938872
[2025-11-23 23:01:20] 2025-11-24 04:00:43,002 | INFO     | chi2: 8.371436823815786
[2025-11-23 23:01:20] 2025-11-24 04:00:43,003 | INFO     | current chi2=8.371436823815786 (change=36.426969371864445 %)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,004 | INFO     | sum of square deviations: 759503028831.5015
[2025-11-23 23:01:20] 2025-11-24 04:00:43,216 | INFO     | sum of deviations: 3078057776105.6206
[2025-11-23 23:01:20] 2025-11-24 04:00:43,216 | INFO     | mean x: 1763915717.1454005
[2025-11-23 23:01:20] 2025-11-24 04:00:43,216 | INFO     | mean y: 2899099.8590504453
[2025-11-23 23:01:20] 2025-11-24 04:00:43,217 | INFO     | intersect: -7145768230.549795
[2025-11-23 23:01:20] 2025-11-24 04:00:43,218 | INFO     | chi2: 5.186211716836237
[2025-11-23 23:01:20] 2025-11-24 04:00:43,218 | INFO     | current chi2=5.186211716836237 (change=38.04872656887221 %)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,219 | INFO     | sum of square deviations: 751081859562.9152
[2025-11-23 23:01:20] 2025-11-24 04:00:43,334 | INFO     | monitor loop #4686: job 0:6893887701 is in state 'finished'
[2025-11-23 23:01:20] 2025-11-24 04:00:43,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,490 | INFO     | sum of deviations: 2737520722975.4883
[2025-11-23 23:01:20] 2025-11-24 04:00:43,491 | INFO     | mean x: 1763915869.6515265
[2025-11-23 23:01:20] 2025-11-24 04:00:43,491 | INFO     | mean y: 2905266.5651526432
[2025-11-23 23:01:20] 2025-11-24 04:00:43,491 | INFO     | intersect: -6426162597.710563
[2025-11-23 23:01:20] 2025-11-24 04:00:43,492 | INFO     | chi2: 3.696297177125288
[2025-11-23 23:01:20] 2025-11-24 04:00:43,492 | INFO     | current chi2=3.696297177125288 (change=28.728378652074127 %)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,522 | INFO     | sum of square deviations: 742723484158.9751
[2025-11-23 23:01:20] 2025-11-24 04:00:43,599 | INFO     | sum of deviations: 2573898573469.191
[2025-11-23 23:01:20] 2025-11-24 04:00:43,600 | INFO     | mean x: 1763916022.1547086
[2025-11-23 23:01:20] 2025-11-24 04:00:43,600 | INFO     | mean y: 2908249.970104634
[2025-11-23 23:01:20] 2025-11-24 04:00:43,600 | INFO     | intersect: -6109919780.887834
[2025-11-23 23:01:20] 2025-11-24 04:00:43,601 | INFO     | chi2: 3.34204843878344
[2025-11-23 23:01:20] 2025-11-24 04:00:43,601 | INFO     | current chi2=3.34204843878344 (change=9.58388141879212 %)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,601 | INFO     | left removable region: 40
[2025-11-23 23:01:20] 2025-11-24 04:00:43,602 | INFO     | sum of square deviations: 700260334477.7672
[2025-11-23 23:01:20] 2025-11-24 04:00:43,648 | INFO     | time since job start (82982s) is within the limit (172800.0s)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,676 | INFO     | sum of deviations: 2674699082719.845
[2025-11-23 23:01:20] 2025-11-24 04:00:43,676 | INFO     | mean x: 1763916449.163872
[2025-11-23 23:01:20] 2025-11-24 04:00:43,676 | INFO     | mean y: 2923187.5030487804
[2025-11-23 23:01:20] 2025-11-24 04:00:43,676 | INFO     | intersect: -6734493564.927396
[2025-11-23 23:01:20] 2025-11-24 04:00:43,682 | INFO     | chi2: 0.3031860961105237
[2025-11-23 23:01:20] 2025-11-24 04:00:43,682 | INFO     | current memory leak: 3.82 B/s (using 1312 data points, chi2=0.30)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,683 | INFO     | could have reported an average CPU frequency of 3126 MHz (49 samples)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | ..............................
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . Timing measurements:
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . get job = 0 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . initial setup = 7 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . payload setup = 51 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . stage-in = 0 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . payload execution = 82826 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . stage-out = 8 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | . log creation = 1 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,684 | INFO     | ..............................
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | 
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | job summary report
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | --------------------------------------------------
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | PanDA job id: 6893887701
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | task id: 47523449
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | errors: (none)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | pilot state: finished 
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | transexitcode: 0
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | exeerrorcode: 0
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | exeerrordiag: 
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | exitcode: 0
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | exitmsg: OK
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | cpuconsumptiontime: 205917 s
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | nevents: 1000
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | neventsw: 0
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | pid: 2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | pgrp: 2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | corecount: 8
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | event service: False
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | sizes: {0: 2298579, 1: 2298635, 2: 2298862, 13: 2298862, 24: 2298918, 34: 2298946, 38: 2299364, 45: 2299392, 82881: 2362431, 82891: 2371425, 82892: 2371481, 82904:
[2025-11-23 23:01:20] 2025-11-24 04:00:43,839 | INFO     | --------------------------------------------------
[2025-11-23 23:01:20] 2025-11-24 04:00:43,840 | INFO     | 
[2025-11-23 23:01:20] 2025-11-24 04:00:43,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-23 23:01:20] 2025-11-24 04:00:43,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | job 6893887701 has completed (purged errors)
[2025-11-23 23:01:20] 2025-11-24 04:00:43,912 | INFO     | overall cleanup function is called
[2025-11-23 23:01:20] 2025-11-24 04:00:44,968 | INFO     | --- collectZombieJob: --- 10, [2615137]
[2025-11-23 23:01:20] 2025-11-24 04:00:44,968 | INFO     | zombie collector waiting for pid 2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:44,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:01:20] 2025-11-24 04:00:44,968 | INFO     | collected zombie processes
[2025-11-23 23:01:20] 2025-11-24 04:00:44,968 | INFO     | will attempt to kill all subprocesses of pid=2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:48,857 | INFO     | process IDs to be killed: [2615137] (in reverse order)
[2025-11-23 23:01:20] 2025-11-24 04:00:49,215 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:01:20] 2025-11-24 04:00:49,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:01:20] 2025-11-24 04:00:49,256 | INFO     | did not find any defunct processes belonging to 2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:49,286 | INFO     | did not find any defunct processes belonging to 2615137
[2025-11-23 23:01:20] 2025-11-24 04:00:49,287 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:01:20] 2025-11-24 04:00:49,287 | INFO     | ready for new job
[2025-11-23 23:01:20] 2025-11-24 04:00:49,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:01:20] 2025-11-24 04:00:49,293 | INFO     | ***************************************
[2025-11-23 23:01:20] 2025-11-24 04:00:49,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:01:20] 2025-11-24 04:00:49,293 | INFO     | ***************************************
[2025-11-23 23:01:20] 2025-11-24 04:00:49,293 | INFO     | 
[2025-11-23 23:01:20] 2025-11-24 04:00:49,298 | INFO     | architecture information:
[2025-11-23 23:01:20] 2025-11-24 04:00:49,305 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:01:20] 2025-11-24 04:00:49,394 | INFO     | cat /etc/os-release:
[2025-11-23 23:01:20] NAME="CentOS Linux"
[2025-11-23 23:01:20] VERSION="7 (Core)"
[2025-11-23 23:01:20] ID="centos"
[2025-11-23 23:01:20] ID_LIKE="rhel fedora"
[2025-11-23 23:01:20] VERSION_ID="7"
[2025-11-23 23:01:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:01:20] ANSI_COLOR="0;31"
[2025-11-23 23:01:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:01:20] HOME_URL="https://www.centos.org/"
[2025-11-23 23:01:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:01:20] 
[2025-11-23 23:01:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:01:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:01:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:01:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:01:20] 
[2025-11-23 23:01:20] 2025-11-24 04:00:49,394 | INFO     | ***************************************
[2025-11-23 23:01:20] 2025-11-24 04:00:49,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-23 23:01:20] 2025-11-24 04:00:49,964 | INFO     | sufficient remaining disk space (68995252224 B)
[2025-11-23 23:01:20] 2025-11-24 04:00:49,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:01:20] 2025-11-24 04:00:49,965 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:01:20] 2025-11-24 04:00:49,965 | INFO     | update_server=False
[2025-11-23 23:01:20] 2025-11-24 04:00:49,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:01:20] 2025-11-24 04:00:49,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:01:20] 2025-11-24 04:00:49,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:01:20] 2025-11-24 04:00:49,966 | INFO     | aborting loop
[2025-11-23 23:01:20] 2025-11-24 04:00:50,694 | INFO     | all job control threads have been joined
[2025-11-23 23:01:20] 2025-11-24 04:00:50,970 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:50,979 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:50,995 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,073 | INFO     | all data control threads have been joined
[2025-11-23 23:01:20] 2025-11-24 04:00:51,073 | INFO     | all payload control threads have been joined
[2025-11-23 23:01:20] 2025-11-24 04:00:51,076 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,135 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,236 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,236 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,722 | INFO     | [job] control thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,767 | INFO     | [job] validate thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,971 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:51,997 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:52,104 | INFO     | [data] control thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:52,104 | INFO     | [payload] control thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:52,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:01:20] 2025-11-24 04:00:52,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:01:20] 2025-11-24 04:00:53,960 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:00:56,395 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:01:20] 2025-11-24 04:01:10,178 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:01:20] 2025-11-24 04:01:11,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551255893824)>', '<ExcThread(monitor, started 140550749529856)>']
[2025-11-23 23:01:20] 2025-11-24 04:01:15,694 | INFO     | 82992s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 23:01:20] 2025-11-24 04:01:16,213 | INFO     | all workflow threads have been joined
[2025-11-23 23:01:20] 2025-11-24 04:01:16,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:01:20] 2025-11-24 04:01:16,221 | INFO     | traces error code: 0
[2025-11-23 23:01:20] 2025-11-24 04:01:16,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:01:20] 2025-11-24 04:01:19,037 | INFO     | PID=2603728 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:01:20] 2025-11-24 04:01:19,037 | INFO     | .. there are 44 such processes running
[2025-11-23 23:01:20] 2025-11-24 04:01:19,038 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:01:20] 2025-11-24 04:01:19,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:01:20] 2025-11-24 04:01:19,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:01:20] 2025-11-24 04:01:19,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:01:20] 2025-11-24 04:01:19,038 | INFO     | [monitor] control thread has ended
[2025-11-23 23:01:20] 2025-11-24 04:01:19,724 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:01:20] 2025-11-24 04:01:19,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:01:20] 2025-11-24 04:01:19,734 [wrapper] pilotpid: 2603728
[2025-11-23 23:01:20] 2025-11-24 04:01:19,736 [wrapper] Pilot exit status: 0
[2025-11-23 23:01:20] 2025-11-24 04:01:19,809 [wrapper] pandaids: 6893887701
[2025-11-23 23:01:20] 2025-11-24 04:01:19,940 [wrapper] cleanup supervisor_pilot  658673 2603729
[2025-11-23 23:01:20] 2025-11-24 04:01:19,943 [wrapper] Test setup, not cleaning
[2025-11-23 23:01:20] 2025-11-24 04:01:19,949 [wrapper] apfmon messages muted
[2025-11-23 23:01:20] 2025-11-24 04:01:19,954 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:01:20] 2025-11-24 04:01:19,956 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:01:20]  *** Error codes and diagnostics ***
[2025-11-23 23:01:20]     "exeErrorCode": 0,
[2025-11-23 23:01:20]     "exeErrorDiag": "",
[2025-11-23 23:01:20]     "pilotErrorCode": 0,
[2025-11-23 23:01:20]     "pilotErrorDiag": "",
[2025-11-23 23:01:20]  *** Listing of results directory ***
[2025-11-23 23:01:20] total 1322820
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 18:33 queuedata.json
[2025-11-23 23:01:20] -rwx------. 1 boincer umatlas     36292 Nov 20 18:34 runpilot2-wrapper.sh
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas       100 Nov 22 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:01:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 23:56 run_atlas
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas       105 Nov 22 23:56 job.xml
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas 410263180 Nov 22 23:56 EVNT.47493127._000983.pool.root.1
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:56 start_atlas.sh
[2025-11-23 23:01:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 23:56 shared
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas    590107 Nov 22 23:56 input.tar.gz
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas         0 Nov 22 23:56 boinc_lockfile
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 23:56 pandaJob.out
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas        57 Nov 22 23:56 setup.sh.local
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas    989784 Nov 22 23:57 agis_schedconf.cvmfs.json
[2025-11-23 23:01:20] drwx------. 5 boincer umatlas      4096 Nov 22 23:57 pilot3
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas       532 Nov 23 22:52 boinc_task_state.xml
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas 915355983 Nov 23 22:59 HITS.47523449._009829.pool.root.1
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas      1070 Nov 23 23:00 memory_monitor_summary.json
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas      6947 Nov 23 23:00 init_data.xml
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas   1526164 Nov 23 23:00 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas   2395457 Nov 23 23:00 log.47523449._009829.job.log.tgz.1
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas        95 Nov 23 23:00 pilot_heartbeat.json
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas      8632 Nov 23 23:00 heartbeat.json
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 23:01 boinc_mmap_file
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas        29 Nov 23 23:01 wrapper_checkpoint.txt
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas       823 Nov 23 23:01 pilotlog.txt
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas  10123180 Nov 23 23:01 log.47523449._009829.job.log.1
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas       353 Nov 23 23:01 output.list
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas       620 Nov 23 23:01 runtime_log
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas  12533760 Nov 23 23:01 result.tar.gz
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas      9338 Nov 23 23:01 runtime_log.err
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas       665 Nov 23 23:01 Lz0NDmuLTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRAHKDmFntM6m.diag
[2025-11-23 23:01:20] -rw-r--r--. 1 boincer umatlas     21292 Nov 23 23:01 stderr.txt
[2025-11-23 23:01:20] HITS file was successfully produced:
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas 915355983 Nov 23 22:59 shared/HITS.pool.root.1
[2025-11-23 23:01:20]  *** Contents of shared directory: ***
[2025-11-23 23:01:20] total 1307392
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas 410263180 Nov 22 23:56 ATLAS.root_0
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 23:56 start_atlas.sh
[2025-11-23 23:01:20] -rw-r--r--. 2 boincer umatlas    590107 Nov 22 23:56 input.tar.gz
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas 915355983 Nov 23 22:59 HITS.pool.root.1
[2025-11-23 23:01:20] -rw-------. 1 boincer umatlas  12533760 Nov 23 23:01 result.tar.gz
23:01:22 (2597705): run_atlas exited; CPU time 207418.898984
23:01:22 (2597705): called boinc_finish(0)

</stderr_txt>
]]>

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