Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:49:04 (6914): wrapper (7.7.26015): starting
11:49:04 (6914): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:49:04] Arguments: --nthreads 8
[2025-11-25 11:49:04] Threads: 8
[2025-11-25 11:49:04] Checking for CVMFS
[2025-11-25 11:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:49:07] 2.11.2.0 22385 283850 143636 153279 1 118 12580296 25165824 4462 130560 9 156212852 99.884 81436680 3046 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 11:49:07] CVMFS is ok
[2025-11-25 11:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:49:07] Checking for apptainer binary...
[2025-11-25 11:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:49:07] Running /usr/bin/apptainer --version
[2025-11-25 11:49:07] apptainer version 1.3.2-1.el7
[2025-11-25 11:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:49:33] cg-vwn497.simple-grid.lan
[2025-11-25 11:49:33] apptainer works
[2025-11-25 11:49:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:49:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:49:33] Starting ATLAS job with PandaID=6895333025
[2025-11-25 11:49:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:09:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:09:48] 2025-11-26 10:08:56,535 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:09:48] 2025-11-26 10:08:56,537 | INFO     | sum of square deviations: 785169616492.0161
[2025-11-26 11:09:48] 2025-11-26 10:08:56,591 | INFO     | sum of deviations: 4192354644083.4546
[2025-11-26 11:09:48] 2025-11-26 10:08:56,591 | INFO     | mean x: 1764110057.2721937
[2025-11-26 11:09:48] 2025-11-26 10:08:56,591 | INFO     | mean y: 2861020.1012472487
[2025-11-26 11:09:48] 2025-11-26 10:08:56,591 | INFO     | intersect: -9416473141.50613
[2025-11-26 11:09:48] 2025-11-26 10:08:56,593 | INFO     | chi2: 14.348745733218141
[2025-11-26 11:09:48] 2025-11-26 10:08:56,595 | INFO     | sum of square deviations: 776560858351.3939
[2025-11-26 11:09:48] 2025-11-26 10:08:56,654 | INFO     | sum of deviations: 4651741218614.126
[2025-11-26 11:09:48] 2025-11-26 10:08:56,654 | INFO     | mean x: 1764109904.7768779
[2025-11-26 11:09:48] 2025-11-26 10:08:56,654 | INFO     | mean y: 2869157.0994108985
[2025-11-26 11:09:48] 2025-11-26 10:08:56,654 | INFO     | intersect: -10564471019.738016
[2025-11-26 11:09:48] 2025-11-26 10:08:56,656 | INFO     | chi2: 11.208413018477907
[2025-11-26 11:09:48] 2025-11-26 10:08:56,656 | INFO     | current chi2=11.208413018477907 (change=21.88576460359312 %)
[2025-11-26 11:09:48] 2025-11-26 10:08:56,656 | INFO     | right removable region: 1357
[2025-11-26 11:09:48] 2025-11-26 10:08:56,658 | INFO     | sum of square deviations: 776559800611.3937
[2025-11-26 11:09:48] 2025-11-26 10:08:56,715 | INFO     | sum of deviations: 3628743582875.701
[2025-11-26 11:09:48] 2025-11-26 10:08:56,716 | INFO     | mean x: 1764110209.7768779
[2025-11-26 11:09:48] 2025-11-26 10:08:56,716 | INFO     | mean y: 2871002.3983799703
[2025-11-26 11:09:48] 2025-11-26 10:08:56,716 | INFO     | intersect: -8240542573.959013
[2025-11-26 11:09:48] 2025-11-26 10:08:56,717 | INFO     | chi2: 9.771539316952593
[2025-11-26 11:09:48] 2025-11-26 10:08:56,718 | INFO     | current chi2=9.771539316952593 (change=31.899697028354623 %)
[2025-11-26 11:09:48] 2025-11-26 10:08:56,719 | INFO     | sum of square deviations: 768013148705.712
[2025-11-26 11:09:48] 2025-11-26 10:08:56,782 | INFO     | sum of deviations: 3144570080050.053
[2025-11-26 11:09:48] 2025-11-26 10:08:56,782 | INFO     | mean x: 1764110362.2815964
[2025-11-26 11:09:48] 2025-11-26 10:08:56,782 | INFO     | mean y: 2879641.6245380635
[2025-11-26 11:09:48] 2025-11-26 10:08:56,782 | INFO     | intersect: -7220132975.393317
[2025-11-26 11:09:48] 2025-11-26 10:08:56,784 | INFO     | chi2: 6.509313147099185
[2025-11-26 11:09:48] 2025-11-26 10:08:56,784 | INFO     | current chi2=6.509313147099185 (change=33.38497716724926 %)
[2025-11-26 11:09:48] 2025-11-26 10:08:56,786 | INFO     | sum of square deviations: 759529592791.6113
[2025-11-26 11:09:48] 2025-11-26 10:08:56,893 | INFO     | sum of deviations: 2794527948059.4883
[2025-11-26 11:09:48] 2025-11-26 10:08:56,893 | INFO     | mean x: 1764110514.7848666
[2025-11-26 11:09:48] 2025-11-26 10:08:56,893 | INFO     | mean y: 2885929.9258160237
[2025-11-26 11:09:48] 2025-11-26 10:08:56,894 | INFO     | intersect: -6487784326.795179
[2025-11-26 11:09:48] 2025-11-26 10:08:56,898 | INFO     | chi2: 4.7154708950306645
[2025-11-26 11:09:48] 2025-11-26 10:08:56,898 | INFO     | current chi2=4.7154708950306645 (change=27.55808810439439 %)
[2025-11-26 11:09:48] 2025-11-26 10:08:56,900 | INFO     | sum of square deviations: 751109065377.7748
[2025-11-26 11:09:48] 2025-11-26 10:08:57,001 | INFO     | sum of deviations: 2673828223285.1704
[2025-11-26 11:09:48] 2025-11-26 10:08:57,002 | INFO     | mean x: 1764110667.2851825
[2025-11-26 11:09:48] 2025-11-26 10:08:57,002 | INFO     | mean y: 2888115.6366344006
[2025-11-26 11:09:48] 2025-11-26 10:08:57,002 | INFO     | intersect: -6277063902.80046
[2025-11-26 11:09:48] 2025-11-26 10:08:57,003 | INFO     | chi2: 4.596378383942237
[2025-11-26 11:09:48] 2025-11-26 10:08:57,004 | INFO     | current chi2=4.596378383942237 (change=2.5255698474129447 %)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,004 | INFO     | left removable region: 40
[2025-11-26 11:09:48] 2025-11-26 10:08:57,005 | INFO     | sum of square deviations: 708324856569.6199
[2025-11-26 11:09:48] 2025-11-26 10:08:57,073 | INFO     | sum of deviations: 2906698984019.2275
[2025-11-26 11:09:48] 2025-11-26 10:08:57,073 | INFO     | mean x: 1764111094.2908125
[2025-11-26 11:09:48] 2025-11-26 10:08:57,074 | INFO     | mean y: 2904394.8375094915
[2025-11-26 11:09:48] 2025-11-26 10:08:57,074 | INFO     | intersect: -7236344486.396913
[2025-11-26 11:09:48] 2025-11-26 10:08:57,075 | INFO     | chi2: 0.4871368554745326
[2025-11-26 11:09:48] 2025-11-26 10:08:57,075 | INFO     | current memory leak: 4.10 B/s (using 1317 data points, chi2=0.49)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,076 | INFO     | could have reported an average CPU frequency of 2249 MHz (46 samples)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | ..............................
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . Timing measurements:
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . get job = 0 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . initial setup = 7 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . payload setup = 163 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . stage-in = 0 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . payload execution = 83299 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . stage-out = 5 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | . log creation = 2 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,077 | INFO     | ..............................
[2025-11-26 11:09:48] 2025-11-26 10:08:57,193 | INFO     | 
[2025-11-26 11:09:48] 2025-11-26 10:08:57,193 | INFO     | job summary report
[2025-11-26 11:09:48] 2025-11-26 10:08:57,193 | INFO     | --------------------------------------------------
[2025-11-26 11:09:48] 2025-11-26 10:08:57,193 | INFO     | PanDA job id: 6895333025
[2025-11-26 11:09:48] 2025-11-26 10:08:57,193 | INFO     | task id: 47556137
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | errors: (none)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | pilot state: finished 
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | transexitcode: 0
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | exeerrorcode: 0
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | exeerrordiag: 
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | exitcode: 0
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | exitmsg: OK
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | cpuconsumptiontime: 303354 s
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | nevents: 1000
[2025-11-26 11:09:48] 2025-11-26 10:08:57,194 | INFO     | neventsw: 0
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | pid: 17395
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | pgrp: 17395
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | corecount: 8
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | event service: False
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 66: 2284589, 76: 2284617, 87: 2284673, 91: 2284963, 98: 2285271, 8
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | --------------------------------------------------
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | 
[2025-11-26 11:09:48] 2025-11-26 10:08:57,195 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-26 11:09:48] 2025-11-26 10:08:57,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:09:48] 2025-11-26 10:08:57,677 | INFO     | job 6895333025 has completed (purged errors)
[2025-11-26 11:09:48] 2025-11-26 10:08:57,677 | INFO     | overall cleanup function is called
[2025-11-26 11:09:48] 2025-11-26 10:08:58,693 | INFO     | --- collectZombieJob: --- 10, [17395]
[2025-11-26 11:09:48] 2025-11-26 10:08:58,693 | INFO     | zombie collector waiting for pid 17395
[2025-11-26 11:09:48] 2025-11-26 10:08:58,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:09:48] 2025-11-26 10:08:58,693 | INFO     | collected zombie processes
[2025-11-26 11:09:48] 2025-11-26 10:08:58,694 | INFO     | will attempt to kill all subprocesses of pid=17395
[2025-11-26 11:09:48] 2025-11-26 10:08:58,819 | INFO     | process IDs to be killed: [17395] (in reverse order)
[2025-11-26 11:09:48] 2025-11-26 10:08:59,480 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:09:48] 2025-11-26 10:08:59,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:09:48] 2025-11-26 10:08:59,483 | INFO     | did not find any defunct processes belonging to 17395
[2025-11-26 11:09:48] 2025-11-26 10:08:59,486 | INFO     | did not find any defunct processes belonging to 17395
[2025-11-26 11:09:48] 2025-11-26 10:08:59,561 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:09:48] 2025-11-26 10:08:59,562 | INFO     | ready for new job
[2025-11-26 11:09:48] 2025-11-26 10:08:59,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:09:48] 2025-11-26 10:08:59,567 | INFO     | ***************************************
[2025-11-26 11:09:48] 2025-11-26 10:08:59,567 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:09:48] 2025-11-26 10:08:59,567 | INFO     | ***************************************
[2025-11-26 11:09:48] 2025-11-26 10:08:59,567 | INFO     | 
[2025-11-26 11:09:48] 2025-11-26 10:08:59,568 | INFO     | pilot is running in a VM
[2025-11-26 11:09:48] 2025-11-26 10:08:59,568 | INFO     | architecture information:
[2025-11-26 11:09:48] 2025-11-26 10:08:59,574 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:09:48] 2025-11-26 10:08:59,786 | INFO     | cat /etc/os-release:
[2025-11-26 11:09:48] NAME="CentOS Linux"
[2025-11-26 11:09:48] VERSION="7 (Core)"
[2025-11-26 11:09:48] ID="centos"
[2025-11-26 11:09:48] ID_LIKE="rhel fedora"
[2025-11-26 11:09:48] VERSION_ID="7"
[2025-11-26 11:09:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:09:48] ANSI_COLOR="0;31"
[2025-11-26 11:09:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:09:48] HOME_URL="https://www.centos.org/"
[2025-11-26 11:09:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:09:48] 
[2025-11-26 11:09:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:09:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:09:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:09:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:09:48] 
[2025-11-26 11:09:48] 2025-11-26 10:08:59,786 | INFO     | ***************************************
[2025-11-26 11:09:48] 2025-11-26 10:09:00,289 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-26 11:09:48] 2025-11-26 10:09:00,412 | INFO     | sufficient remaining disk space (496166240256 B)
[2025-11-26 11:09:48] 2025-11-26 10:09:00,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:09:48] 2025-11-26 10:09:00,412 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:09:48] 2025-11-26 10:09:00,412 | INFO     | update_server=False
[2025-11-26 11:09:48] 2025-11-26 10:09:00,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:09:48] 2025-11-26 10:09:00,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:09:48] 2025-11-26 10:09:00,446 | INFO     | all payload control threads have been joined
[2025-11-26 11:09:48] 2025-11-26 10:09:00,957 | INFO     | all job control threads have been joined
[2025-11-26 11:09:48] 2025-11-26 10:09:01,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:09:48] 2025-11-26 10:09:01,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:09:48] 2025-11-26 10:09:01,268 | INFO     | aborting loop
[2025-11-26 11:09:48] 2025-11-26 10:09:01,290 | INFO     | all data control threads have been joined
[2025-11-26 11:09:48] 2025-11-26 10:09:01,417 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,452 | INFO     | [payload] control thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,636 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,637 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,658 | INFO     | [job] validate thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,944 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,959 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:01,963 | INFO     | [job] control thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:09:48] 2025-11-26 10:09:02,217 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,274 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,296 | INFO     | [data] control thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,419 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,512 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:02,881 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:03,213 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:04,273 [wrapper] supervise_pilot (15 min periods counter: 94)
[2025-11-26 11:09:48] 2025-11-26 10:09:05,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:09:48] 2025-11-26 10:09:29,182 | INFO     | PID=10738 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 11:09:48] 2025-11-26 10:09:29,182 | INFO     | .. there are 9 such processes running
[2025-11-26 11:09:48] 2025-11-26 10:09:29,182 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:09:48] 2025-11-26 10:09:29,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:09:48] 2025-11-26 10:09:29,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:09:48] 2025-11-26 10:09:39,130 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:09:48] 2025-11-26 10:09:40,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625018476352)>', '<ExcThread(monitor, started 140624560887552)>']
[2025-11-26 11:09:48] 2025-11-26 10:09:41,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:09:48] 2025-11-26 10:09:41,253 | INFO     | [monitor] control thread has ended
[2025-11-26 11:09:48] 2025-11-26 10:09:45,903 | INFO     | all workflow threads have been joined
[2025-11-26 11:09:48] 2025-11-26 10:09:45,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:09:48] 2025-11-26 10:09:45,904 | INFO     | traces error code: 0
[2025-11-26 11:09:48] 2025-11-26 10:09:45,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:09:48] 2025-11-26 10:09:46,180 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:09:48] 2025-11-26 10:09:46,271 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:09:48] 2025-11-26 10:09:46,353 [wrapper] pilotpid: 10738
[2025-11-26 11:09:48] 2025-11-26 10:09:46,462 [wrapper] Pilot exit status: 0
[2025-11-26 11:09:48] 2025-11-26 10:09:46,904 [wrapper] pandaids: 6895333025
[2025-11-26 11:09:48] 2025-11-26 10:09:47,797 [wrapper] cleanup supervisor_pilot 23396 10739
[2025-11-26 11:09:48] 2025-11-26 10:09:47,840 [wrapper] Test setup, not cleaning
[2025-11-26 11:09:48] 2025-11-26 10:09:47,910 [wrapper] apfmon messages muted
[2025-11-26 11:09:48] 2025-11-26 10:09:47,948 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:09:48] 2025-11-26 10:09:48,015 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:09:48]  *** Error codes and diagnostics ***
[2025-11-26 11:09:48]     "exeErrorCode": 0,
[2025-11-26 11:09:48]     "exeErrorDiag": "",
[2025-11-26 11:09:48]     "pilotErrorCode": 0,
[2025-11-26 11:09:48]     "pilotErrorDiag": "",
[2025-11-26 11:09:48]  *** Listing of results directory ***
[2025-11-26 11:09:48] total 1320888
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc      5112 Nov 22 01:28 queuedata.json
[2025-11-26 11:09:48] -rwx------. 1 boinc boinc     36292 Nov 22 01:28 runpilot2-wrapper.sh
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc    576529 Nov 22 01:28 pilot3.tar.gz
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc       100 Nov 25 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:09:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 11:49 run_atlas
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc       105 Nov 25 11:49 job.xml
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc      6392 Nov 25 11:49 init_data.xml
[2025-11-26 11:09:48] -rw-r--r--. 2 boinc boinc 410783190 Nov 25 11:49 EVNT.47483658._000194.pool.root.1
[2025-11-26 11:09:48] -rw-r--r--. 2 boinc boinc     15847 Nov 25 11:49 start_atlas.sh
[2025-11-26 11:09:48] drwxrwx--x. 2 boinc boinc        68 Nov 25 11:49 shared
[2025-11-26 11:09:48] -rw-r--r--. 2 boinc boinc    590094 Nov 25 11:49 input.tar.gz
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc         0 Nov 25 11:49 boinc_lockfile
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc      2785 Nov 25 11:49 pandaJob.out
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc    991894 Nov 25 11:53 agis_schedconf.cvmfs.json
[2025-11-26 11:09:48] drwx------. 5 boinc boinc      4096 Nov 25 11:53 pilot3
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc       533 Nov 26 10:56 boinc_task_state.xml
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc 910475852 Nov 26 11:05 HITS.47556137._001929.pool.root.1
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc      1032 Nov 26 11:07 memory_monitor_summary.json
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc   1516240 Nov 26 11:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc   2474492 Nov 26 11:07 log.47556137._001929.job.log.tgz.1
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc        95 Nov 26 11:08 pilot_heartbeat.json
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc      8627 Nov 26 11:08 heartbeat.json
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc        29 Nov 26 11:09 wrapper_checkpoint.txt
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc      8192 Nov 26 11:09 boinc_mmap_file
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc      4885 Nov 26 11:09 pilotlog.txt
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc  11239276 Nov 26 11:09 log.47556137._001929.job.log.1
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc       353 Nov 26 11:09 output.list
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc       620 Nov 26 11:09 runtime_log
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc  13731840 Nov 26 11:09 result.tar.gz
[2025-11-26 11:09:48] -rw-------. 1 boinc boinc       662 Nov 26 11:09 zfyKDmXfqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3sHKDmLg4ulm.diag
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc      8833 Nov 26 11:09 runtime_log.err
[2025-11-26 11:09:48] -rw-r--r--. 1 boinc boinc     20832 Nov 26 11:09 stderr.txt
[2025-11-26 11:09:49] HITS file was successfully produced:
[2025-11-26 11:09:49] -rw-------. 1 boinc boinc 910475852 Nov 26 11:05 shared/HITS.pool.root.1
[2025-11-26 11:09:49]  *** Contents of shared directory: ***
[2025-11-26 11:09:49] total 1304304
[2025-11-26 11:09:49] -rw-r--r--. 2 boinc boinc 410783190 Nov 25 11:49 ATLAS.root_0
[2025-11-26 11:09:49] -rw-r--r--. 2 boinc boinc     15847 Nov 25 11:49 start_atlas.sh
[2025-11-26 11:09:49] -rw-r--r--. 2 boinc boinc    590094 Nov 25 11:49 input.tar.gz
[2025-11-26 11:09:49] -rw-------. 1 boinc boinc 910475852 Nov 26 11:05 HITS.pool.root.1
[2025-11-26 11:09:49] -rw-------. 1 boinc boinc  13731840 Nov 26 11:09 result.tar.gz
11:09:50 (6914): run_atlas exited; CPU time 303790.581389
11:09:50 (6914): called boinc_finish(0)

</stderr_txt>
]]>

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