Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:51 (1709695): wrapper (7.7.26015): starting
23:22:51 (1709695): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 23:22:51] Arguments: --nthreads 3
[2025-11-22 23:22:51] Threads: 3
[2025-11-22 23:22:51] Checking for CVMFS
[2025-11-22 23:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:22:51] 2.9.2.0 1027257 592 68736 153187 1 88 34748801 36864001 0 130560 0 2005423 99.998 23852 17933 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 23:22:51] CVMFS is ok
[2025-11-22 23:22:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:22:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:22:51] Further information can be found at the LHC@home message board.
[2025-11-22 23:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:22:51] Checking for apptainer binary...
[2025-11-22 23:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:22:51] Running /usr/bin/apptainer --version
[2025-11-22 23:22:51] apptainer version 1.4.1-1.1
[2025-11-22 23:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:22:51] thA335
[2025-11-22 23:22:51] apptainer works
[2025-11-22 23:22:51] Set ATHENA_PROC_NUMBER=3
[2025-11-22 23:22:51] Set ATHENA_CORE_NUMBER=3
[2025-11-22 23:22:51] Starting ATLAS job with PandaID=6895333037
[2025-11-22 23:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:27:11]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:27:11] 2025-11-22 22:26:21,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:27:11] 2025-11-22 22:26:21,967 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:27:11] 2025-11-22 22:26:21,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:27:11] 2025-11-22 22:26:21,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:27:11] 2025-11-22 22:26:22,052 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 23:27:11] 2025-11-22 22:26:22,053 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 23:27:11] 2025-11-22 22:26:22,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:27:11] 2025-11-22 22:26:22,053 | INFO     | will abort loop
[2025-11-22 23:27:11] 2025-11-22 22:26:22,327 | INFO     | all job control threads have been joined
[2025-11-22 23:27:11] 2025-11-22 22:26:22,972 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:22,973 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,050 | INFO     | all data control threads have been joined
[2025-11-22 23:27:11] 2025-11-22 22:26:23,059 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,086 | INFO     | all payload control threads have been joined
[2025-11-22 23:27:11] 2025-11-22 22:26:23,334 | INFO     | [job] control thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,870 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,900 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:23,973 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,040 | INFO     | [job] validate thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,056 | INFO     | [data] control thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,092 | INFO     | [payload] control thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,129 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,178 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:24,395 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:26:25,974 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:27:11] 2025-11-22 22:27:04,263 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:27:11] 2025-11-22 22:27:05,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381395732288)>', '<ExcThread(monitor, started 140380460803840)>']
[2025-11-22 23:27:11] 2025-11-22 22:27:06,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:27:11] 2025-11-22 22:27:06,201 | INFO     | [monitor] control thread has ended
[2025-11-22 23:27:11] 2025-11-22 22:27:10,919 | INFO     | all workflow threads have been joined
[2025-11-22 23:27:11] 2025-11-22 22:27:10,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:27:11] 2025-11-22 22:27:10,920 | INFO     | traces error code: 0
[2025-11-22 23:27:11] 2025-11-22 22:27:10,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:27:11] 2025-11-22 22:27:10,967 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:27:11] 2025-11-22 22:27:10,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:27:11] 2025-11-22 22:27:10,973 [wrapper] pilotpid: 1713423
[2025-11-22 23:27:11] 2025-11-22 22:27:10,976 [wrapper] Pilot exit status: 0
[2025-11-22 23:27:11] 2025-11-22 22:27:10,983 [wrapper] pandaids: 6895333037
[2025-11-22 23:27:11] 2025-11-22 22:27:11,000 [wrapper] cleanup supervisor_pilot 1713429 1713424
[2025-11-22 23:27:11] 2025-11-22 22:27:11,002 [wrapper] Test setup, not cleaning
[2025-11-22 23:27:11] 2025-11-22 22:27:11,005 [wrapper] apfmon messages muted
[2025-11-22 23:27:11] 2025-11-22 22:27:11,007 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:27:11] 2025-11-22 22:27:11,009 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:27:11]  *** Error codes and diagnostics ***
[2025-11-22 23:27:11]     "exeErrorCode": 65,
[2025-11-22 23:27:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 23:27:11]     "pilotErrorCode": 1305,
[2025-11-22 23:27:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 23:27:11]  *** Listing of results directory ***
[2025-11-22 23:27:11] total 404912
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc    576529 Nov 22 01:28 pilot3.tar.gz
[2025-11-22 23:27:11] -rwx------ 1 boinc boinc     36292 Nov 22 01:37 runpilot2-wrapper.sh
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      5112 Nov 22 01:37 queuedata.json
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc       100 Nov 22 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:27:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 23:22 run_atlas
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc       105 Nov 22 23:22 job.xml
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc 410423866 Nov 22 23:22 EVNT.47483658._000196.pool.root.1
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc    590095 Nov 22 23:22 input.tar.gz
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc     15847 Nov 22 23:22 start_atlas.sh
[2025-11-22 23:27:11] drwxrwx--x 2 boinc boinc      4096 Nov 22 23:22 shared
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc         0 Nov 22 23:22 boinc_setup_complete
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      6194 Nov 22 23:22 init_data.xml
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc         0 Nov 22 23:22 boinc_lockfile
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      2782 Nov 22 23:22 pandaJob.out
[2025-11-22 23:27:11] -rw------- 1 boinc boinc    989784 Nov 22 23:23 agis_schedconf.cvmfs.json
[2025-11-22 23:27:11] -rw------- 1 boinc boinc   1526164 Nov 22 23:23 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:27:11] drwx------ 5 boinc boinc      4096 Nov 22 23:23 pilot3
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc       523 Nov 22 23:23 boinc_task_state.xml
[2025-11-22 23:27:11] -rw------- 1 boinc boinc       955 Nov 22 23:24 memory_monitor_summary.json
[2025-11-22 23:27:11] -rw------- 1 boinc boinc     55783 Nov 22 23:24 log.47556137._001941.job.log.tgz.1
[2025-11-22 23:27:11] -rw------- 1 boinc boinc        95 Nov 22 23:26 pilot_heartbeat.json
[2025-11-22 23:27:11] -rw------- 1 boinc boinc      8398 Nov 22 23:26 heartbeat.json
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      8192 Nov 22 23:27 boinc_mmap_file
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc        23 Nov 22 23:27 wrapper_checkpoint.txt
[2025-11-22 23:27:11] -rw------- 1 boinc boinc      4742 Nov 22 23:27 pilotlog.txt
[2025-11-22 23:27:11] -rw------- 1 boinc boinc     93722 Nov 22 23:27 log.47556137._001941.job.log.1
[2025-11-22 23:27:11] -rw------- 1 boinc boinc       186 Nov 22 23:27 output.list
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc       620 Nov 22 23:27 runtime_log
[2025-11-22 23:27:11] -rw------- 1 boinc boinc    174080 Nov 22 23:27 result.tar.gz
[2025-11-22 23:27:11] -rw------- 1 boinc boinc       648 Nov 22 23:27 uv0LDmaoqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5sHKDmuG7KHn.diag
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      8744 Nov 22 23:27 runtime_log.err
[2025-11-22 23:27:11] -rw-r--r-- 1 boinc boinc      7319 Nov 22 23:27 stderr.txt
[2025-11-22 23:27:11] No HITS result produced
[2025-11-22 23:27:11]  *** Contents of shared directory: ***
[2025-11-22 23:27:11] total 401580
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc 410423866 Nov 22 23:22 ATLAS.root_0
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc    590095 Nov 22 23:22 input.tar.gz
[2025-11-22 23:27:11] -rw-r--r-- 2 boinc boinc     15847 Nov 22 23:22 start_atlas.sh
[2025-11-22 23:27:11] -rw------- 1 boinc boinc    174080 Nov 22 23:27 result.tar.gz
23:27:12 (1709695): run_atlas exited; CPU time 31.925568
23:27:12 (1709695): called boinc_finish(0)

</stderr_txt>
]]>

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