Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:06:27 (2412780): wrapper (7.7.26015): starting
18:06:27 (2412780): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 18:06:27] Arguments: --nthreads 9
[2025-11-22 18:06:27] Threads: 9
[2025-11-22 18:06:27] Checking for CVMFS
[2025-11-22 18:06:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:06:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:06:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:06:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:06:27] 2.13.3.0 3025293 3830 90820 153187 0 90 11315479 37030912 1932 16776704 0 4315231 99.871 597749 15448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 18:06:27] CVMFS is ok
[2025-11-22 18:06:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:06:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:06:27] Further information can be found at the LHC@home message board.
[2025-11-22 18:06:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:06:27] Checking for apptainer binary...
[2025-11-22 18:06:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:06:27] Running /usr/bin/apptainer --version
[2025-11-22 18:06:27] apptainer version 1.4.4-1.el9
[2025-11-22 18:06:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:06:28] c-205-37.aglt2.org
[2025-11-22 18:06:28] apptainer works
[2025-11-22 18:06:28] Set ATHENA_PROC_NUMBER=9
[2025-11-22 18:06:28] Set ATHENA_CORE_NUMBER=9
[2025-11-22 18:06:28] Starting ATLAS job with PandaID=6895324242
[2025-11-22 18:06:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:51:34]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:51:34] 2025-11-23 07:50:36,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:51:34] 2025-11-23 07:50:36,746 | INFO     | time since job start (31438s) is within the limit (172800.0s)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,786 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 02:51:34] 2025-11-23 07:50:37,792 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2656.4233750000003
[2025-11-23 02:51:34] 2025-11-23 07:50:37,799 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895324242/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,799 | INFO     | extracted standard info from prmon json
[2025-11-23 02:51:34] 2025-11-23 07:50:37,799 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:51:34] 2025-11-23 07:50:37,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:51:34] 2025-11-23 07:50:37,810 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:51:34] 2025-11-23 07:50:37,811 | INFO     | sum of square deviations: 42354425777.12615
[2025-11-23 02:51:34] 2025-11-23 07:50:37,818 | INFO     | sum of deviations: 643503280193.272
[2025-11-23 02:51:34] 2025-11-23 07:50:37,818 | INFO     | mean x: 1763868498.106796
[2025-11-23 02:51:34] 2025-11-23 07:50:37,818 | INFO     | mean y: 3058546.122330097
[2025-11-23 02:51:34] 2025-11-23 07:50:37,818 | INFO     | intersect: -26795915670.50603
[2025-11-23 02:51:34] 2025-11-23 07:50:37,819 | INFO     | chi2: 4.768635153848582
[2025-11-23 02:51:34] 2025-11-23 07:50:37,820 | INFO     | sum of square deviations: 41132754529.56859
[2025-11-23 02:51:34] 2025-11-23 07:50:37,827 | INFO     | sum of deviations: 793490024251.5493
[2025-11-23 02:51:34] 2025-11-23 07:50:37,827 | INFO     | mean x: 1763868345.6078432
[2025-11-23 02:51:34] 2025-11-23 07:50:37,827 | INFO     | mean y: 3077249.362745098
[2025-11-23 02:51:34] 2025-11-23 07:50:37,827 | INFO     | intersect: -34023623669.16646
[2025-11-23 02:51:34] 2025-11-23 07:50:37,828 | INFO     | chi2: 2.4690189758360384
[2025-11-23 02:51:34] 2025-11-23 07:50:37,828 | INFO     | current chi2=2.4690189758360384 (change=48.22378109922315 %)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,829 | INFO     | sum of square deviations: 39934804657.00988
[2025-11-23 02:51:34] 2025-11-23 07:50:37,836 | INFO     | sum of deviations: 810424175791.099
[2025-11-23 02:51:34] 2025-11-23 07:50:37,836 | INFO     | mean x: 1763868193.1089108
[2025-11-23 02:51:34] 2025-11-23 07:50:37,836 | INFO     | mean y: 3079380.8891089107
[2025-11-23 02:51:34] 2025-11-23 07:50:37,836 | INFO     | intersect: -35792298582.81662
[2025-11-23 02:51:34] 2025-11-23 07:50:37,837 | INFO     | chi2: 2.26733708540214
[2025-11-23 02:51:34] 2025-11-23 07:50:37,837 | INFO     | current chi2=2.26733708540214 (change=8.168503053550108 %)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,837 | INFO     | right removable region: 504
[2025-11-23 02:51:34] 2025-11-23 07:50:37,838 | INFO     | sum of square deviations: 41132720979.56858
[2025-11-23 02:51:34] 2025-11-23 07:50:37,845 | INFO     | sum of deviations: 493556082393.9605
[2025-11-23 02:51:34] 2025-11-23 07:50:37,845 | INFO     | mean x: 1763868650.6078432
[2025-11-23 02:51:34] 2025-11-23 07:50:37,845 | INFO     | mean y: 3077222.2098039216
[2025-11-23 02:51:34] 2025-11-23 07:50:37,845 | INFO     | intersect: -21161778404.140728
[2025-11-23 02:51:34] 2025-11-23 07:50:37,846 | INFO     | chi2: 2.6263328099972005
[2025-11-23 02:51:34] 2025-11-23 07:50:37,846 | INFO     | current chi2=2.6263328099972005 (change=44.92485322812779 %)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,847 | INFO     | sum of square deviations: 39934737557.009895
[2025-11-23 02:51:34] 2025-11-23 07:50:37,853 | INFO     | sum of deviations: 452894473103.5541
[2025-11-23 02:51:34] 2025-11-23 07:50:37,854 | INFO     | mean x: 1763868803.1089108
[2025-11-23 02:51:34] 2025-11-23 07:50:37,854 | INFO     | mean y: 3082394.299009901
[2025-11-23 02:51:34] 2025-11-23 07:50:37,854 | INFO     | intersect: -20000715829.42519
[2025-11-23 02:51:34] 2025-11-23 07:50:37,855 | INFO     | chi2: 2.5639533011993167
[2025-11-23 02:51:34] 2025-11-23 07:50:37,855 | INFO     | current chi2=2.5639533011993167 (change=2.3751562848560037 %)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,855 | INFO     | left removable region: 20
[2025-11-23 02:51:34] 2025-11-23 07:50:37,856 | INFO     | sum of square deviations: 35157100374.97554
[2025-11-23 02:51:34] 2025-11-23 07:50:37,862 | INFO     | sum of deviations: 561783859915.2645
[2025-11-23 02:51:34] 2025-11-23 07:50:37,862 | INFO     | mean x: 1763868772.6115704
[2025-11-23 02:51:34] 2025-11-23 07:50:37,862 | INFO     | mean y: 3111211.8099173554
[2025-11-23 02:51:34] 2025-11-23 07:50:37,862 | INFO     | intersect: -28182177019.953636
[2025-11-23 02:51:34] 2025-11-23 07:50:37,863 | INFO     | chi2: 0.023181324795659326
[2025-11-23 02:51:34] 2025-11-23 07:50:37,863 | INFO     | current memory leak: 15.98 B/s (using 484 data points, chi2=0.02)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,864 | INFO     | could have reported an average CPU frequency of 2618 MHz (21 samples)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,864 | INFO     | ..............................
[2025-11-23 02:51:34] 2025-11-23 07:50:37,864 | INFO     | . Timing measurements:
[2025-11-23 02:51:34] 2025-11-23 07:50:37,864 | INFO     | . get job = 0 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,864 | INFO     | . initial setup = 2 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | . payload setup = 5 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | . stage-in = 0 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | . payload execution = 31404 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | . stage-out = 3 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | . log creation = 0 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,865 | INFO     | ..............................
[2025-11-23 02:51:34] 2025-11-23 07:50:37,972 | INFO     | 
[2025-11-23 02:51:34] 2025-11-23 07:50:37,972 | INFO     | job summary report
[2025-11-23 02:51:34] 2025-11-23 07:50:37,972 | INFO     | --------------------------------------------------
[2025-11-23 02:51:34] 2025-11-23 07:50:37,972 | INFO     | PanDA job id: 6895324242
[2025-11-23 02:51:34] 2025-11-23 07:50:37,972 | INFO     | task id: 47556149
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | errors: (none)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | pilot state: finished 
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | transexitcode: 0
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | exeerrorcode: 0
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | exeerrordiag: 
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | exitcode: 0
[2025-11-23 02:51:34] 2025-11-23 07:50:37,973 | INFO     | exitmsg: OK
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | cpuconsumptiontime: 277360 s
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | nevents: 1000
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | neventsw: 0
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | pid: 2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | pgrp: 2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | corecount: 9
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | event service: False
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | sizes: {0: 2298581, 1: 2298780, 4: 2299042, 11: 2299070, 31413: 2338458, 31417: 2347452, 31420: 2347636, 31425: 2347882}
[2025-11-23 02:51:34] 2025-11-23 07:50:37,974 | INFO     | --------------------------------------------------
[2025-11-23 02:51:34] 2025-11-23 07:50:37,975 | INFO     | 
[2025-11-23 02:51:34] 2025-11-23 07:50:37,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 02:51:34] 2025-11-23 07:50:37,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:51:34] 2025-11-23 07:50:37,993 | INFO     | job 6895324242 has completed (purged errors)
[2025-11-23 02:51:34] 2025-11-23 07:50:37,993 | INFO     | overall cleanup function is called
[2025-11-23 02:51:34] 2025-11-23 07:50:39,009 | INFO     | --- collectZombieJob: --- 10, [2425338]
[2025-11-23 02:51:34] 2025-11-23 07:50:39,010 | INFO     | zombie collector waiting for pid 2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:39,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:51:34] 2025-11-23 07:50:39,010 | INFO     | collected zombie processes
[2025-11-23 02:51:34] 2025-11-23 07:50:39,010 | INFO     | will attempt to kill all subprocesses of pid=2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:39,207 | INFO     | process IDs to be killed: [2425338] (in reverse order)
[2025-11-23 02:51:34] 2025-11-23 07:50:39,262 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:51:34] 2025-11-23 07:50:39,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:51:34] 2025-11-23 07:50:39,268 | INFO     | did not find any defunct processes belonging to 2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:39,272 | INFO     | did not find any defunct processes belonging to 2425338
[2025-11-23 02:51:34] 2025-11-23 07:50:39,274 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:51:34] 2025-11-23 07:50:39,274 | INFO     | ready for new job
[2025-11-23 02:51:34] 2025-11-23 07:50:39,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:51:34] 2025-11-23 07:50:39,277 | INFO     | ***************************************
[2025-11-23 02:51:34] 2025-11-23 07:50:39,277 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:51:34] 2025-11-23 07:50:39,277 | INFO     | ***************************************
[2025-11-23 02:51:34] 2025-11-23 07:50:39,277 | INFO     | 
[2025-11-23 02:51:34] 2025-11-23 07:50:39,279 | INFO     | architecture information:
[2025-11-23 02:51:34] 2025-11-23 07:50:39,280 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:51:34] 2025-11-23 07:50:39,292 | INFO     | cat /etc/os-release:
[2025-11-23 02:51:34] NAME="CentOS Linux"
[2025-11-23 02:51:34] VERSION="7 (Core)"
[2025-11-23 02:51:34] ID="centos"
[2025-11-23 02:51:34] ID_LIKE="rhel fedora"
[2025-11-23 02:51:34] VERSION_ID="7"
[2025-11-23 02:51:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:51:34] ANSI_COLOR="0;31"
[2025-11-23 02:51:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:51:34] HOME_URL="https://www.centos.org/"
[2025-11-23 02:51:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:51:34] 
[2025-11-23 02:51:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:51:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:51:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:51:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:51:34] 
[2025-11-23 02:51:34] 2025-11-23 07:50:39,292 | INFO     | ***************************************
[2025-11-23 02:51:34] 2025-11-23 07:50:39,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 02:51:34] 2025-11-23 07:50:39,808 | INFO     | sufficient remaining disk space (39089864704 B)
[2025-11-23 02:51:34] 2025-11-23 07:50:39,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:51:34] 2025-11-23 07:50:39,809 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:51:34] 2025-11-23 07:50:39,809 | INFO     | update_server=False
[2025-11-23 02:51:34] 2025-11-23 07:50:39,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:51:34] 2025-11-23 07:50:39,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:51:34] 2025-11-23 07:50:39,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:51:34] 2025-11-23 07:50:39,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:51:34] 2025-11-23 07:50:39,811 | INFO     | aborting loop
[2025-11-23 02:51:34] 2025-11-23 07:50:39,990 | INFO     | all job control threads have been joined
[2025-11-23 02:51:34] 2025-11-23 07:50:40,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:51:34] 2025-11-23 07:50:40,705 | INFO     | all data control threads have been joined
[2025-11-23 02:51:34] 2025-11-23 07:50:40,815 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:40,815 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:40,816 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:40,825 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:40,826 | INFO     | all payload control threads have been joined
[2025-11-23 02:51:34] 2025-11-23 07:50:40,996 | INFO     | [job] control thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,024 | INFO     | [job] validate thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,083 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,501 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,658 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,681 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,710 | INFO     | [data] control thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,831 | INFO     | [payload] control thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:41,905 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:42,411 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:43,816 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:50:50,170 | INFO     | job.realtimelogging is not enabled
[2025-11-23 02:51:34] 2025-11-23 07:50:51,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:51:34] 2025-11-23 07:51:10,060 | INFO     | PID=2416485 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 02:51:34] 2025-11-23 07:51:10,060 | INFO     | .. there are 3 such processes running
[2025-11-23 02:51:34] 2025-11-23 07:51:10,061 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:51:34] 2025-11-23 07:51:10,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:51:34] 2025-11-23 07:51:10,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:51:34] 2025-11-23 07:51:27,773 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:51:34] 2025-11-23 07:51:28,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131242919744)>', '<ExcThread(monitor, started 140130463500032)>']
[2025-11-23 02:51:34] 2025-11-23 07:51:29,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:51:34] 2025-11-23 07:51:29,157 | INFO     | [monitor] control thread has ended
[2025-11-23 02:51:34] 2025-11-23 07:51:33,812 | INFO     | all workflow threads have been joined
[2025-11-23 02:51:34] 2025-11-23 07:51:33,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:51:34] 2025-11-23 07:51:33,813 | INFO     | traces error code: 0
[2025-11-23 02:51:34] 2025-11-23 07:51:33,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:51:34] 2025-11-23 07:51:33,911 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:51:34] 2025-11-23 07:51:33,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:51:34] 2025-11-23 07:51:33,916 [wrapper] pilotpid: 2416485
[2025-11-23 02:51:34] 2025-11-23 07:51:33,919 [wrapper] Pilot exit status: 0
[2025-11-23 02:51:34] 2025-11-23 07:51:33,927 [wrapper] pandaids: 6895324242
[2025-11-23 02:51:34] 2025-11-23 07:51:33,963 [wrapper] cleanup supervisor_pilot 2873546 2416486
[2025-11-23 02:51:34] 2025-11-23 07:51:33,965 [wrapper] Test setup, not cleaning
[2025-11-23 02:51:34] 2025-11-23 07:51:33,968 [wrapper] apfmon messages muted
[2025-11-23 02:51:34] 2025-11-23 07:51:33,970 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:51:34] 2025-11-23 07:51:33,973 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:51:34]  *** Error codes and diagnostics ***
[2025-11-23 02:51:34]     "exeErrorCode": 0,
[2025-11-23 02:51:34]     "exeErrorDiag": "",
[2025-11-23 02:51:34]     "pilotErrorCode": 0,
[2025-11-23 02:51:34]     "pilotErrorDiag": "",
[2025-11-23 02:51:34]  *** Listing of results directory ***
[2025-11-23 02:51:34] total 1314684
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 08:51 pilot3.tar.gz
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 09:13 queuedata.json
[2025-11-23 02:51:34] -rwx------. 1 boincer umatlas     36292 Nov 21 09:14 runpilot2-wrapper.sh
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas       100 Nov 22 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:51:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 18:06 run_atlas
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas       105 Nov 22 18:06 job.xml
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas 411234284 Nov 22 18:06 EVNT.47483658._001017.pool.root.1
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:06 start_atlas.sh
[2025-11-23 02:51:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 18:06 shared
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 18:06 input.tar.gz
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas         0 Nov 22 18:06 boinc_lockfile
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas      2783 Nov 22 18:06 pandaJob.out
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas    989784 Nov 22 18:06 agis_schedconf.cvmfs.json
[2025-11-23 02:51:34] drwx------. 5 boincer umatlas      4096 Nov 22 18:06 pilot3
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas       533 Nov 23 02:41 boinc_task_state.xml
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas 918214854 Nov 23 02:49 HITS.47556149._000033.pool.root.1
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas      6530 Nov 23 02:49 init_data.xml
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas      1046 Nov 23 02:50 memory_monitor_summary.json
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas   1526164 Nov 23 02:50 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas   1930514 Nov 23 02:50 log.47556149._000033.job.log.tgz.1
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas      8615 Nov 23 02:50 heartbeat.json
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas        95 Nov 23 02:51 pilot_heartbeat.json
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas        29 Nov 23 02:51 wrapper_checkpoint.txt
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 02:51 boinc_mmap_file
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas      4895 Nov 23 02:51 pilotlog.txt
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas   4501637 Nov 23 02:51 log.47556149._000033.job.log.1
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas       353 Nov 23 02:51 output.list
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas       620 Nov 23 02:51 runtime_log
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas   6451200 Nov 23 02:51 result.tar.gz
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas       659 Nov 23 02:51 wHwMDm64gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKTJKDmHnNcDo.diag
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas      8818 Nov 23 02:51 runtime_log.err
[2025-11-23 02:51:34] -rw-r--r--. 1 boincer umatlas     21305 Nov 23 02:51 stderr.txt
[2025-11-23 02:51:34] HITS file was successfully produced:
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas 918214854 Nov 23 02:49 shared/HITS.pool.root.1
[2025-11-23 02:51:34]  *** Contents of shared directory: ***
[2025-11-23 02:51:34] total 1305196
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas 411234284 Nov 22 18:06 ATLAS.root_0
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 18:06 start_atlas.sh
[2025-11-23 02:51:34] -rw-r--r--. 2 boincer umatlas    590100 Nov 22 18:06 input.tar.gz
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas 918214854 Nov 23 02:49 HITS.pool.root.1
[2025-11-23 02:51:34] -rw-------. 1 boincer umatlas   6451200 Nov 23 02:51 result.tar.gz
02:51:35 (2412780): run_atlas exited; CPU time 277681.611905
02:51:35 (2412780): called boinc_finish(0)

</stderr_txt>
]]>

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