Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:51 (22020): wrapper (7.7.26015): starting
07:22:51 (22020): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 07:22:51] Arguments: --nthreads 8
[2025-11-23 07:22:51] Threads: 8
[2025-11-23 07:22:51] Checking for CVMFS
[2025-11-23 07:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:22:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:22:52] 2.11.2.0 2860 61388 82976 153209 3 81 12269391 20275200 1 130560 0 14571764 99.821 3833362 30213 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 07:22:52] CVMFS is ok
[2025-11-23 07:22:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:22:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:22:52] Further information can be found at the LHC@home message board.
[2025-11-23 07:22:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:22:52] Checking for apptainer binary...
[2025-11-23 07:22:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:22:52] Running /usr/bin/apptainer --version
[2025-11-23 07:22:52] apptainer version 1.3.2-1.el7
[2025-11-23 07:22:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:22:53] c-204-9.aglt2.org
[2025-11-23 07:22:53] apptainer works
[2025-11-23 07:22:53] Set ATHENA_PROC_NUMBER=8
[2025-11-23 07:22:53] Set ATHENA_CORE_NUMBER=8
[2025-11-23 07:22:53] Starting ATLAS job with PandaID=6895332458
[2025-11-23 07:22:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:16:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:16:37] 2025-11-24 02:15:38,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:16:37] 2025-11-24 02:15:40,480 | INFO     | time since job start (49949s) is within the limit (172800.0s)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,331 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 21:16:37] 2025-11-24 02:15:41,335 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-23 21:16:37] 2025-11-24 02:15:41,336 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332458/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,337 | INFO     | extracted standard info from prmon json
[2025-11-23 21:16:37] 2025-11-24 02:15:41,337 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:16:37] 2025-11-24 02:15:41,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:16:37] 2025-11-24 02:15:41,352 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:16:37] 2025-11-24 02:15:41,353 | INFO     | sum of square deviations: 170345243462.237
[2025-11-23 21:16:37] 2025-11-24 02:15:41,361 | INFO     | monitor loop #3698: job 0:6895332458 is in state 'finished'
[2025-11-23 21:16:37] 2025-11-24 02:15:41,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,368 | INFO     | sum of deviations: 930201721496.8994
[2025-11-23 21:16:37] 2025-11-24 02:15:41,368 | INFO     | mean x: 1763925573.030525
[2025-11-23 21:16:37] 2025-11-24 02:15:41,368 | INFO     | mean y: 2872837.884004884
[2025-11-23 21:16:37] 2025-11-24 02:15:41,368 | INFO     | intersect: -9629369138.91731
[2025-11-23 21:16:37] 2025-11-24 02:15:41,369 | INFO     | chi2: 6.558698631312351
[2025-11-23 21:16:37] 2025-11-24 02:15:41,370 | INFO     | sum of square deviations: 167244383644.73212
[2025-11-23 21:16:37] 2025-11-24 02:15:41,384 | INFO     | sum of deviations: 1228393430780.7334
[2025-11-23 21:16:37] 2025-11-24 02:15:41,384 | INFO     | mean x: 1763925420.5307126
[2025-11-23 21:16:37] 2025-11-24 02:15:41,384 | INFO     | mean y: 2887504.0307125305
[2025-11-23 21:16:37] 2025-11-24 02:15:41,385 | INFO     | intersect: -12952969976.779346
[2025-11-23 21:16:37] 2025-11-24 02:15:41,385 | INFO     | chi2: 2.9025879292565406
[2025-11-23 21:16:37] 2025-11-24 02:15:41,386 | INFO     | current chi2=2.9025879292565406 (change=55.74445339813163 %)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,386 | INFO     | sum of square deviations: 164181385002.2275
[2025-11-23 21:16:37] 2025-11-24 02:15:41,400 | INFO     | sum of deviations: 1333364404640.675
[2025-11-23 21:16:37] 2025-11-24 02:15:41,400 | INFO     | mean x: 1763925268.0309024
[2025-11-23 21:16:37] 2025-11-24 02:15:41,400 | INFO     | mean y: 2892724.2929542647
[2025-11-23 21:16:37] 2025-11-24 02:15:41,400 | INFO     | intersect: -14322453384.870138
[2025-11-23 21:16:37] 2025-11-24 02:15:41,401 | INFO     | chi2: 2.295377766688153
[2025-11-23 21:16:37] 2025-11-24 02:15:41,401 | INFO     | current chi2=2.295377766688153 (change=20.919613026983004 %)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,401 | INFO     | right removable region: 808
[2025-11-23 21:16:37] 2025-11-24 02:15:41,402 | INFO     | sum of square deviations: 167244368394.73215
[2025-11-23 21:16:37] 2025-11-24 02:15:41,416 | INFO     | sum of deviations: 711487672665.5792
[2025-11-23 21:16:37] 2025-11-24 02:15:41,416 | INFO     | mean x: 1763925725.5307126
[2025-11-23 21:16:37] 2025-11-24 02:15:41,416 | INFO     | mean y: 2883578.396805897
[2025-11-23 21:16:37] 2025-11-24 02:15:41,416 | INFO     | intersect: -7501174233.88598
[2025-11-23 21:16:37] 2025-11-24 02:15:41,417 | INFO     | chi2: 4.445947265129795
[2025-11-23 21:16:37] 2025-11-24 02:15:41,417 | INFO     | current chi2=4.445947265129795 (change=32.212966092021965 %)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,418 | INFO     | sum of square deviations: 164181354502.2275
[2025-11-23 21:16:37] 2025-11-24 02:15:41,431 | INFO     | sum of deviations: 661853371407.4623
[2025-11-23 21:16:37] 2025-11-24 02:15:41,432 | INFO     | mean x: 1763925878.0309024
[2025-11-23 21:16:37] 2025-11-24 02:15:41,432 | INFO     | mean y: 2886048.4215080347
[2025-11-23 21:16:37] 2025-11-24 02:15:41,432 | INFO     | intersect: -7107910989.568464
[2025-11-23 21:16:37] 2025-11-24 02:15:41,433 | INFO     | chi2: 4.397491072296552
[2025-11-23 21:16:37] 2025-11-24 02:15:41,433 | INFO     | current chi2=4.397491072296552 (change=1.0898958072060694 %)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,433 | INFO     | left removable region: 20
[2025-11-23 21:16:37] 2025-11-24 02:15:41,434 | INFO     | sum of square deviations: 151724925264.20728
[2025-11-23 21:16:37] 2025-11-24 02:15:41,446 | INFO     | sum of deviations: 997443417301.2733
[2025-11-23 21:16:37] 2025-11-24 02:15:41,446 | INFO     | mean x: 1763925847.531726
[2025-11-23 21:16:37] 2025-11-24 02:15:41,447 | INFO     | mean y: 2909479.269035533
[2025-11-23 21:16:37] 2025-11-24 02:15:41,447 | INFO     | intersect: -11593182739.35831
[2025-11-23 21:16:37] 2025-11-24 02:15:41,447 | INFO     | chi2: 0.09253307599810526
[2025-11-23 21:16:37] 2025-11-24 02:15:41,448 | INFO     | current memory leak: 6.57 B/s (using 788 data points, chi2=0.09)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,448 | INFO     | could have reported an average CPU frequency of 2174 MHz (31 samples)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,448 | INFO     | ..............................
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . Timing measurements:
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . get job = 0 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . initial setup = 2 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . payload setup = 9 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . stage-in = 0 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . payload execution = 49905 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . stage-out = 3 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | . log creation = 0 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,449 | INFO     | ..............................
[2025-11-23 21:16:37] 2025-11-24 02:15:41,543 | INFO     | 
[2025-11-23 21:16:37] 2025-11-24 02:15:41,543 | INFO     | job summary report
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | --------------------------------------------------
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | PanDA job id: 6895332458
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | task id: 47556137
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | errors: (none)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:16:37] 2025-11-24 02:15:41,544 | INFO     | pilot state: finished 
[2025-11-23 21:16:37] 2025-11-24 02:15:41,545 | INFO     | transexitcode: 0
[2025-11-23 21:16:37] 2025-11-24 02:15:41,545 | INFO     | exeerrorcode: 0
[2025-11-23 21:16:37] 2025-11-24 02:15:41,545 | INFO     | exeerrordiag: 
[2025-11-23 21:16:37] 2025-11-24 02:15:41,545 | INFO     | exitcode: 0
[2025-11-23 21:16:37] 2025-11-24 02:15:41,545 | INFO     | exitmsg: OK
[2025-11-23 21:16:37] 2025-11-24 02:15:41,546 | INFO     | cpuconsumptiontime: 366086 s
[2025-11-23 21:16:37] 2025-11-24 02:15:41,546 | INFO     | nevents: 1000
[2025-11-23 21:16:37] 2025-11-24 02:15:41,546 | INFO     | neventsw: 0
[2025-11-23 21:16:37] 2025-11-24 02:15:41,546 | INFO     | pid: 32183
[2025-11-23 21:16:37] 2025-11-24 02:15:41,546 | INFO     | pgrp: 32183
[2025-11-23 21:16:37] 2025-11-24 02:15:41,547 | INFO     | corecount: 8
[2025-11-23 21:16:37] 2025-11-24 02:15:41,547 | INFO     | event service: False
[2025-11-23 21:16:37] 2025-11-24 02:15:41,547 | INFO     | sizes: {0: 2298580, 1: 2298835, 7: 2299097, 12: 2299125, 49918: 2347638, 49922: 2356632, 49923: 2356816, 49933: 2357062}
[2025-11-23 21:16:37] 2025-11-24 02:15:41,547 | INFO     | --------------------------------------------------
[2025-11-23 21:16:37] 2025-11-24 02:15:41,547 | INFO     | 
[2025-11-23 21:16:37] 2025-11-24 02:15:41,548 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 21:16:37] 2025-11-24 02:15:41,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:16:37] 2025-11-24 02:15:41,581 | INFO     | job 6895332458 has completed (purged errors)
[2025-11-23 21:16:37] 2025-11-24 02:15:41,581 | INFO     | overall cleanup function is called
[2025-11-23 21:16:37] 2025-11-24 02:15:42,594 | INFO     | --- collectZombieJob: --- 10, [32183]
[2025-11-23 21:16:37] 2025-11-24 02:15:42,594 | INFO     | zombie collector waiting for pid 32183
[2025-11-23 21:16:37] 2025-11-24 02:15:42,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:16:37] 2025-11-24 02:15:42,595 | INFO     | collected zombie processes
[2025-11-23 21:16:37] 2025-11-24 02:15:42,595 | INFO     | will attempt to kill all subprocesses of pid=32183
[2025-11-23 21:16:37] 2025-11-24 02:15:42,692 | INFO     | process IDs to be killed: [32183] (in reverse order)
[2025-11-23 21:16:37] 2025-11-24 02:15:42,750 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:16:37] 2025-11-24 02:15:42,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:16:37] 2025-11-24 02:15:42,755 | INFO     | did not find any defunct processes belonging to 32183
[2025-11-23 21:16:37] 2025-11-24 02:15:42,758 | INFO     | did not find any defunct processes belonging to 32183
[2025-11-23 21:16:37] 2025-11-24 02:15:42,761 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:16:37] 2025-11-24 02:15:42,761 | INFO     | ready for new job
[2025-11-23 21:16:37] 2025-11-24 02:15:42,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:16:37] 2025-11-24 02:15:42,765 | INFO     | ***************************************
[2025-11-23 21:16:37] 2025-11-24 02:15:42,766 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:16:37] 2025-11-24 02:15:42,766 | INFO     | ***************************************
[2025-11-23 21:16:37] 2025-11-24 02:15:42,766 | INFO     | 
[2025-11-23 21:16:37] 2025-11-24 02:15:42,766 | INFO     | architecture information:
[2025-11-23 21:16:37] 2025-11-24 02:15:42,767 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:16:37] 2025-11-24 02:15:42,786 | INFO     | cat /etc/os-release:
[2025-11-23 21:16:37] NAME="CentOS Linux"
[2025-11-23 21:16:37] VERSION="7 (Core)"
[2025-11-23 21:16:37] ID="centos"
[2025-11-23 21:16:37] ID_LIKE="rhel fedora"
[2025-11-23 21:16:37] VERSION_ID="7"
[2025-11-23 21:16:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:16:37] ANSI_COLOR="0;31"
[2025-11-23 21:16:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:16:37] HOME_URL="https://www.centos.org/"
[2025-11-23 21:16:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:16:37] 
[2025-11-23 21:16:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:16:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:16:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:16:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:16:37] 
[2025-11-23 21:16:37] 2025-11-24 02:15:42,787 | INFO     | ***************************************
[2025-11-23 21:16:37] 2025-11-24 02:15:43,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 21:16:37] 2025-11-24 02:15:43,311 | INFO     | sufficient remaining disk space (17469276160 B)
[2025-11-23 21:16:37] 2025-11-24 02:15:43,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:16:37] 2025-11-24 02:15:43,312 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:16:37] 2025-11-24 02:15:43,312 | INFO     | update_server=False
[2025-11-23 21:16:37] 2025-11-24 02:15:43,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:16:37] 2025-11-24 02:15:43,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:16:37] 2025-11-24 02:15:43,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:16:37] 2025-11-24 02:15:43,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:16:37] 2025-11-24 02:15:43,313 | INFO     | aborting loop
[2025-11-23 21:16:37] 2025-11-24 02:15:43,922 | INFO     | all data control threads have been joined
[2025-11-23 21:16:37] 2025-11-24 02:15:44,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:16:37] 2025-11-24 02:15:44,311 | INFO     | all payload control threads have been joined
[2025-11-23 21:16:37] 2025-11-24 02:15:44,313 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:44,316 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:44,317 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:44,858 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:44,928 | INFO     | [data] control thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:44,992 | INFO     | all job control threads have been joined
[2025-11-23 21:16:37] 2025-11-24 02:15:45,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,227 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,316 | INFO     | [payload] control thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,322 | INFO     | [job] validate thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,549 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,558 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,574 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,659 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:45,998 | INFO     | [job] control thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:46,184 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:15:47,318 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:16:37] 2025-11-24 02:16:13,699 | INFO     | PID=25742 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 21:16:37] 2025-11-24 02:16:13,699 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:16:37] 2025-11-24 02:16:13,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:16:37] 2025-11-24 02:16:13,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:16:37] 2025-11-24 02:16:31,331 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:16:37] 2025-11-24 02:16:32,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990546261824)>', '<ExcThread(monitor, started 139989711034112)>']
[2025-11-23 21:16:37] 2025-11-24 02:16:32,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:16:37] 2025-11-24 02:16:32,797 | INFO     | [monitor] control thread has ended
[2025-11-23 21:16:37] 2025-11-24 02:16:37,405 | INFO     | all workflow threads have been joined
[2025-11-23 21:16:37] 2025-11-24 02:16:37,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:16:37] 2025-11-24 02:16:37,406 | INFO     | traces error code: 0
[2025-11-23 21:16:37] 2025-11-24 02:16:37,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:16:37] 2025-11-24 02:16:37,511 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:16:37] 2025-11-24 02:16:37,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:16:37] 2025-11-24 02:16:37,521 [wrapper] pilotpid: 25742
[2025-11-23 21:16:37] 2025-11-24 02:16:37,525 [wrapper] Pilot exit status: 0
[2025-11-23 21:16:37] 2025-11-24 02:16:37,544 [wrapper] pandaids: 6895332458
[2025-11-23 21:16:37] 2025-11-24 02:16:37,604 [wrapper] cleanup supervisor_pilot 11456 25743
[2025-11-23 21:16:37] 2025-11-24 02:16:37,610 [wrapper] Test setup, not cleaning
[2025-11-23 21:16:37] 2025-11-24 02:16:37,615 [wrapper] apfmon messages muted
[2025-11-23 21:16:37] 2025-11-24 02:16:37,619 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:16:37] 2025-11-24 02:16:37,624 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:16:37]  *** Error codes and diagnostics ***
[2025-11-23 21:16:37]     "exeErrorCode": 0,
[2025-11-23 21:16:37]     "exeErrorDiag": "",
[2025-11-23 21:16:37]     "pilotErrorCode": 0,
[2025-11-23 21:16:37]     "pilotErrorDiag": "",
[2025-11-23 21:16:37]  *** Listing of results directory ***
[2025-11-23 21:16:37] total 1318492
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:17 queuedata.json
[2025-11-23 21:16:37] -rwx------ 1 boincer umatlas     36292 Nov 21 19:18 runpilot2-wrapper.sh
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas       100 Nov 23 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:16:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 07:22 run_atlas
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas       105 Nov 23 07:22 job.xml
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas 410266848 Nov 23 07:22 EVNT.47483658._000189.pool.root.1
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:22 start_atlas.sh
[2025-11-23 21:16:37] drwxrwx--x 2 boincer umatlas      4096 Nov 23 07:22 shared
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 07:22 input.tar.gz
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas         0 Nov 23 07:22 boinc_lockfile
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 07:22 pandaJob.out
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas        57 Nov 23 07:22 setup.sh.local
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas    989784 Nov 23 07:23 agis_schedconf.cvmfs.json
[2025-11-23 21:16:37] drwx------ 5 boincer umatlas      4096 Nov 23 07:23 pilot3
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas       533 Nov 23 21:05 boinc_task_state.xml
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 21:12 init_data.xml
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas 918018160 Nov 23 21:14 HITS.47556137._001889.pool.root.1
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas      1065 Nov 23 21:15 memory_monitor_summary.json
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas   1526164 Nov 23 21:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas   2058029 Nov 23 21:15 log.47556137._001889.job.log.tgz.1
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas      8658 Nov 23 21:15 heartbeat.json
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas        95 Nov 23 21:16 pilot_heartbeat.json
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 21:16 boinc_mmap_file
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas        29 Nov 23 21:16 wrapper_checkpoint.txt
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas      4746 Nov 23 21:16 pilotlog.txt
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas   6906631 Nov 23 21:16 log.47556137._001889.job.log.1
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas       353 Nov 23 21:16 output.list
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas       620 Nov 23 21:16 runtime_log
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas   8980480 Nov 23 21:16 result.tar.gz
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 21:16 runtime_log.err
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas       669 Nov 23 21:16 iJlLDmTVqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZsHKDmrbLnRn.diag
[2025-11-23 21:16:37] -rw-r--r-- 1 boincer umatlas     21326 Nov 23 21:16 stderr.txt
[2025-11-23 21:16:37] HITS file was successfully produced:
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas 918018160 Nov 23 21:14 shared/HITS.pool.root.1
[2025-11-23 21:16:37]  *** Contents of shared directory: ***
[2025-11-23 21:16:37] total 1306528
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas 410266848 Nov 23 07:22 ATLAS.root_0
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:22 start_atlas.sh
[2025-11-23 21:16:37] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 07:22 input.tar.gz
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas 918018160 Nov 23 21:14 HITS.pool.root.1
[2025-11-23 21:16:37] -rw------- 1 boincer umatlas   8980480 Nov 23 21:16 result.tar.gz
21:16:39 (22020): run_atlas exited; CPU time 355726.500436
21:16:39 (22020): called boinc_finish(0)

</stderr_txt>
]]>

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